Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611163
Identifier: 120611163
GI number: 120611163
Start: 2729701
End: 2730006
Strand: Reverse
Name: 120611163
Synonym: Aave_2493
Alternate gene names: NA
Gene position: 2730006-2729701 (Counterclockwise)
Preceding gene: 120611164
Following gene: 120611162
Centisome position: 51.0
GC content: 64.38
Gene sequence:
>306_bases TTGAGAAGATGGAGCCATCATGAGGAAATCAGAGAAGTTTTTCGCCGGAGGTTCGCGAGCGTGCGGGGCGCATGGTGTTC GAGCACCGAGGTGAGCACGAATCGCAGTGGGCGGCCCGTGGTATCGATCTCCGGCAAGATCGGCAGCACGCCGCAGATGC GGCTGAACGAAGGCGTGACCACGGCCGAGGCCAATCGCGTCACGGAACTGGAGCGCGAAGTGCGCGAGCTCCGCCGCGCC AACGAGATCCCCAAGCTGGCCAGCGCGTTTTTCGCCCAGGCGGAGCTCGACCGCCGGCTGAAGTGA
Upstream 100 bases:
>100_bases CAGGCCACTTAAGTTCGACATACTCGGCAACTTATCATTTATGCGACGTGACAACTGAAGGAATGTTGAACCGCCCCGGT TTTCGCGGAGGCTCCCCCGT
Downstream 100 bases:
>100_bases TGTACGCCTTCGTGGATCGGTACCGCCAGCAGCACGGGGTCGAGCCGATCGTCAGTTCAATGCGCAGCGTCCGAACCAAC TGTGGGTGAGCGACTTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MRRWSHHEEIREVFRRRFASVRGAWCSSTEVSTNRSGRPVVSISGKIGSTPQMRLNEGVTTAEANRVTELEREVRELRRA NEIPKLASAFFAQAELDRRLK
Sequences:
>Translated_101_residues MRRWSHHEEIREVFRRRFASVRGAWCSSTEVSTNRSGRPVVSISGKIGSTPQMRLNEGVTTAEANRVTELEREVRELRRA NEIPKLASAFFAQAELDRRLK >Mature_101_residues MRRWSHHEEIREVFRRRFASVRGAWCSSTEVSTNRSGRPVVSISGKIGSTPQMRLNEGVTTAEANRVTELEREVRELRRA NEIPKLASAFFAQAELDRRLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 11654; Mature: 11654
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWSHHEEIREVFRRRFASVRGAWCSSTEVSTNRSGRPVVSISGKIGSTPQMRLNEGVT CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHCCCCC TAEANRVTELEREVRELRRANEIPKLASAFFAQAELDRRLK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRWSHHEEIREVFRRRFASVRGAWCSSTEVSTNRSGRPVVSISGKIGSTPQMRLNEGVT CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHCCCCC TAEANRVTELEREVRELRRANEIPKLASAFFAQAELDRRLK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]