Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611128
Identifier: 120611128
GI number: 120611128
Start: 2679451
End: 2680092
Strand: Reverse
Name: 120611128
Synonym: Aave_2457
Alternate gene names: NA
Gene position: 2680092-2679451 (Counterclockwise)
Preceding gene: 120611129
Following gene: 120611126
Centisome position: 50.07
GC content: 70.4
Gene sequence:
>642_bases ATGCCATCCCTGCCCCCCGCAGTCCGCCTGGCTGCGCTGTGCCTGGCCAGCGCGGCTGCCGCGCTGCCCGCTACCGCCCA GAACGTCTATCGCATCGTCGGCCCGGACGGCAAGGTGACTTTCTCCGACCGGGCGCCGGACGCGCAATCGGGACCGGCGA CGGTGAACGGCAAGCCTGTCGGTACCTCTGCCAGCGGCCTGCCCTATGAATTGCAGCAGGTCGCTTCGCGGTTTCCCGTC ACGCTCTACACCGGCAACGACTGCGCGCCCTGCACAAGCGCGCGTAATCTGCTGACGAGCCGCGGCGTGCCCTTCACCGA GCGCACCGTGAACACCAACGAGGACGCCGAGGCCCTGCAGCGCCTGAGCGGCTCCACCGCACTGCCTTTCGCCACCATCG GATCGCAGCAGCTCAGCGGCTTCTCCGACACCGAGTGGACACAGTACCTCGATGCCGCGGCGTACCCCAAGCAGTCGCAA CTGCCCCCGAACTACCGGCGGCCGCCTGCCACGCCTCTGGTCAGCGCCAAGCCTGCCACGCCGGCCCCGGCAGCGCCACC TGCCGCACCGCCCGCTCCGGTACAACGACCAGCCGCGCCGCCTGCGCCTTCGCCTGCGAACCCCGCCGGCATCCAGTTCT GA
Upstream 100 bases:
>100_bases CTGGACGCCCTGCTGCGCCACCAGGGCATGGCCCAGCCCGCCTGACGACCACCGCCTGACACCCCGCTGAAACGTCCCAC GCCCGAGGAGACACGCCCCC
Downstream 100 bases:
>100_bases CGTGCATGGGTAACGGTGCGCAACGGCCGCGGGCCGGGCGCGCCGGCTGCCCCCCTCTCAGTACGTGAAAGTCCGGACAC CCTCCGGCGCACCGATCAGC
Product: glutaredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPSLPPAVRLAALCLASAAAALPATAQNVYRIVGPDGKVTFSDRAPDAQSGPATVNGKPVGTSASGLPYELQQVASRFPV TLYTGNDCAPCTSARNLLTSRGVPFTERTVNTNEDAEALQRLSGSTALPFATIGSQQLSGFSDTEWTQYLDAAAYPKQSQ LPPNYRRPPATPLVSAKPATPAPAAPPAAPPAPVQRPAAPPAPSPANPAGIQF
Sequences:
>Translated_213_residues MPSLPPAVRLAALCLASAAAALPATAQNVYRIVGPDGKVTFSDRAPDAQSGPATVNGKPVGTSASGLPYELQQVASRFPV TLYTGNDCAPCTSARNLLTSRGVPFTERTVNTNEDAEALQRLSGSTALPFATIGSQQLSGFSDTEWTQYLDAAAYPKQSQ LPPNYRRPPATPLVSAKPATPAPAAPPAAPPAPVQRPAAPPAPSPANPAGIQF >Mature_212_residues PSLPPAVRLAALCLASAAAALPATAQNVYRIVGPDGKVTFSDRAPDAQSGPATVNGKPVGTSASGLPYELQQVASRFPVT LYTGNDCAPCTSARNLLTSRGVPFTERTVNTNEDAEALQRLSGSTALPFATIGSQQLSGFSDTEWTQYLDAAAYPKQSQL PPNYRRPPATPLVSAKPATPAPAAPPAAPPAPVQRPAAPPAPSPANPAGIQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21882; Mature: 21750
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLPPAVRLAALCLASAAAALPATAQNVYRIVGPDGKVTFSDRAPDAQSGPATVNGKPV CCCCCHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCEEECCCCCCCCCCCCCCCCCCC GTSASGLPYELQQVASRFPVTLYTGNDCAPCTSARNLLTSRGVPFTERTVNTNEDAEALQ CCCCCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH RLSGSTALPFATIGSQQLSGFSDTEWTQYLDAAAYPKQSQLPPNYRRPPATPLVSAKPAT HHCCCCCCCCHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPAAPPAAPPAPVQRPAAPPAPSPANPAGIQF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSLPPAVRLAALCLASAAAALPATAQNVYRIVGPDGKVTFSDRAPDAQSGPATVNGKPV CCCCHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCEEECCCCCCCCCCCCCCCCCCC GTSASGLPYELQQVASRFPVTLYTGNDCAPCTSARNLLTSRGVPFTERTVNTNEDAEALQ CCCCCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH RLSGSTALPFATIGSQQLSGFSDTEWTQYLDAAAYPKQSQLPPNYRRPPATPLVSAKPAT HHCCCCCCCCHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPAAPPAAPPAPVQRPAAPPAPSPANPAGIQF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA