Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611123
Identifier: 120611123
GI number: 120611123
Start: 2676319
End: 2676642
Strand: Direct
Name: 120611123
Synonym: Aave_2452
Alternate gene names: NA
Gene position: 2676319-2676642 (Clockwise)
Preceding gene: 120611122
Following gene: 120611124
Centisome position: 50.0
GC content: 66.67
Gene sequence:
>324_bases ATGAAAGGCTTGTTTATGACCTCTGCATCCGAAACCTTCTCCAATGCACAACAAGAACTGGAAAGGCTGGTCACCGACCT GCGCGGCCTGCTGTCCAACAAGGACCTGGACAGCGTTCCGGAAATCCGCCAGCTGCGCCGCCGGCTGGACGATGGCGTGA ACACGGTGCGTGACTCCGCCGTGCGCGCAGCGCAGGAGGCCGCCAACCAGGCGAAGGAAGCAGCCCGCGTGGCGGACCGC TATGCGCACGACGAGCCCTGGCGCGTTGCCACGGCGGCACTGGCCGCAGGCGCCCTGGTCGGCTTCCTGCTCGCCCGGCG CTGA
Upstream 100 bases:
>100_bases CTCCGCGGCGGGCTGTGGCTTCGCGCTTCATCGTGGCCGGTAATATGGGACATCCGCCTACAGCCGACCTGGGAGGGGCG GATTACCTTTGGGTTCTGCT
Downstream 100 bases:
>100_bases GCGGGGCAGGCGCTCGCCACGCCGGGCGCCGCCATCTCTCTCCTTCTGGCTGGGCACGCACGGCACCCGGCCTTTTCACT GCATCGAAAGGTCCTCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MKGLFMTSASETFSNAQQELERLVTDLRGLLSNKDLDSVPEIRQLRRRLDDGVNTVRDSAVRAAQEAANQAKEAARVADR YAHDEPWRVATAALAAGALVGFLLARR
Sequences:
>Translated_107_residues MKGLFMTSASETFSNAQQELERLVTDLRGLLSNKDLDSVPEIRQLRRRLDDGVNTVRDSAVRAAQEAANQAKEAARVADR YAHDEPWRVATAALAAGALVGFLLARR >Mature_107_residues MKGLFMTSASETFSNAQQELERLVTDLRGLLSNKDLDSVPEIRQLRRRLDDGVNTVRDSAVRAAQEAANQAKEAARVADR YAHDEPWRVATAALAAGALVGFLLARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11780; Mature: 11780
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLFMTSASETFSNAQQELERLVTDLRGLLSNKDLDSVPEIRQLRRRLDDGVNTVRDSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VRAAQEAANQAKEAARVADRYAHDEPWRVATAALAAGALVGFLLARR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKGLFMTSASETFSNAQQELERLVTDLRGLLSNKDLDSVPEIRQLRRRLDDGVNTVRDSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VRAAQEAANQAKEAARVADRYAHDEPWRVATAALAAGALVGFLLARR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA