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The map label for this gene is ygiQ [C]

Identifier: 120611108

GI number: 120611108

Start: 2659666

End: 2662044

Strand: Direct

Name: ygiQ [C]

Synonym: Aave_2437

Alternate gene names: 120611108

Gene position: 2659666-2662044 (Clockwise)

Preceding gene: 120611106

Following gene: 120611112

Centisome position: 49.69

GC content: 68.18

Gene sequence:

>2379_bases
ATGAACGCCCCTGTTGACGTTTCCTTTTTCGCGCGCGCCGCCAAGCCGCTGACGAGCTACCGCCCCTATTGGGCGAAGCG
TTTCGGCACGGCCCCGTTCCTGCCCATGAGCCGCGAGGAGATGCAGCAACTGGGATGGGACAGCTGCGACGTGATCCTGG
TGACGGGCGACGCCTATGTCGATCACCCGAGCTTCGGCATGGCGGTGATCGGCCGCACGCTGGAGGCGCAGGGCTTTCGC
GTGGGCATCATCGCCCAGCCCGACTGGCAGAGCGCCGAGCCCTTCAAGGCGCTGGGCCGTCCCAACCTGTTCTGGGGCGT
GACGGCGGGCAACATGGATTCCATGATCAACCGGTACACGGCCGACCGGAAGATCCGCAGCGACGACGCCTATACGCCGG
GCGACGTGGGTGGCAAGCGCCCCGACCGGGCAGCCATCGTCTACAGCCAGCGTTGCCGCGAGGCATTCAAGGACGTGCCC
ATCATCCTGGGCGGCATCGAAGGCAGCCTGCGCCGCATCGCCCACTACGACTACTGGAGCGACAAGGTGCGCCGCTCCAT
CGTGGTCGATGCCAAATGCGACCTGCTGCTGTACGGCAACGCCGAGCGCGCGCTGGTCGAGGTGGCGCACCGCCTCGCCG
CGCGCGAGCCGGTCGAGCAGATCACCGACGTGCGCGGCACGGCCTTCGTGCGCCGGCCGGGCGACGAGACGGCCGCCGGC
TGGTTCGAGATCGACTCCACCACGGTCGATGAACCGGGCCGTGTCGAGGCCCACGTGAATCCCTATCTCACGACCAGCGA
GCAGGCCTCCGCGCAGGGCAGCATCTGCAGCAAGGAGGAGGGCGCTCCTGCGGCGCAGGATCCGAACCCCGCGGTCCAGC
CCATCCAGTTCGTCGCGAACCCGGCGCTCAAGGCCAAACTGAAAGTGCCCCCGCGCGAAAAGAGCGTCATCCGGCTGCCC
AGCTACGAGCAGGTCAAGAGCGACCCGGTGCTGTACGCGCACGCCAACCGCGTGCTGCACCTGGAAACCAATCCCGGCAA
TGCCCGCGCGCTGGTGCAGGCGCACGGGGAGGGCGCCACGGCGCGCGACGTGTGGATCAACCCGCCGCCCATCCCGCTCA
CCACGGCCGAGATGGACCACGTCTTCGACCTGCCGTATGCCCGGGGCCCGCACCCCAGTTATGCCGACGAGAACGGCAGC
CACGACGGCGCGACGAAGATCCCCGCGTGGGAGATGATCCGCTTCAGCGTGAACATCATGCGCGGCTGCTTCGGCGGCTG
CACGTTCTGCTCGATCACCGAGCACGAGGGCCGCATCATCCAGAGCCGCAGCGAGGACTCGATCATTCAGGAGATCGAGG
ACATCCGCGACAAGGTCAAGGGTTTCACCGGCACCATCTCGGACCTGGGCGGCCCCACGGCCAACATGTACCGCCTGGGC
TGCCGCAGCCCCGAGATCGAGGCCGCCTGCCGCAAGCCCAGCTGCGTCTATCCGGGCATCTGCCAGAACCTCACCACCGA
CCACGGCCCGCTCATCAAGATCTACCGCCGGGGCCGGGCGCTCAAGGGCATCAAGAAGATCCTCATCGGCTCGGGCCTGC
GCTACGACCTGGCCGTGAAGTCGCCCGAGTACGTCCGGGAACTGGTGCAGCACCATGTGGGCGGCTACCTGAAAATCGCA
CCGGAGCACACCGAGCAGGGCCCGCTCACCAAGATGATGAAGCCGGGCATCGGCAGCTATGACCGCTTCAAGCAGATGTT
CGAGCAGTTCAGCGAAGAGGCGGGCAAGAAGCAGTTCCTGATCCCGTACTTCATCGCCGCGCACCCGGGAACCAGCGACG
AGGACATGATGAACCTCGCCATCTGGCTCAAGAAGAACGGCTTCCGCGCCGACCAGGTACAGACCTTCTACCCCAGCCCC
ATGGCCACGGCCACGGCCATGTACCACTCCGGCCGCAATACGCTGACCCGGGTGCGGCGCCAGATGCGCGACGCGGCCGA
GGAGTCGGTGGACATCGTGCGCGGAGAGAAGCGCCGCCGCCTGCACAAGGCCTTCCTGCGCTACCACGATCCGAACAACT
GGCCCCTGCTGCGCGAGGCGCTCAAGGCGATGGGCCGGGCCGACCTGATCGGCAACGGCAAGCACCACCTGATCCCCACC
TTCCAGCCGATGACGGACGGCAGCTACCAGAGCGCCCGGCGCAAGAACAGCACCACGGCGCCCGCCAAGGGGCCGGCACC
CGGCAAGCTGCTCACCCAGCACACGGGCCTGCCACCCCGGGCGGGTGTTCGCGCCGGGCCGCGCGCAGGCGGGCCGTCGT
CGGGCAAGCCCGCGGCCGGGCCGCGTCCGGGCGGTGCGGGGCGCAACAAACCCCGCTGA

Upstream 100 bases:

>100_bases
GTCAGGGAAACCATTTCGTTCCCGTGGTGGAAGGGAGGGACCGGGTACCCCAAGGGCCGTGCCCCTCTAGAATCCAGGGC
CCCGCCCCCACGCCATTCCA

Downstream 100 bases:

>100_bases
CCAAGGCCGGGGCGTCCCGGTTGCCAGTCCGCACCCTGCGTTACGGCCGGGGCTGCGGCCCGGGCAGGCAGCCCTCAGGC
CGCAGGCTGGGTGATGAGGT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 792; Mature: 792

Protein sequence:

>792_residues
MNAPVDVSFFARAAKPLTSYRPYWAKRFGTAPFLPMSREEMQQLGWDSCDVILVTGDAYVDHPSFGMAVIGRTLEAQGFR
VGIIAQPDWQSAEPFKALGRPNLFWGVTAGNMDSMINRYTADRKIRSDDAYTPGDVGGKRPDRAAIVYSQRCREAFKDVP
IILGGIEGSLRRIAHYDYWSDKVRRSIVVDAKCDLLLYGNAERALVEVAHRLAAREPVEQITDVRGTAFVRRPGDETAAG
WFEIDSTTVDEPGRVEAHVNPYLTTSEQASAQGSICSKEEGAPAAQDPNPAVQPIQFVANPALKAKLKVPPREKSVIRLP
SYEQVKSDPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVWINPPPIPLTTAEMDHVFDLPYARGPHPSYADENGS
HDGATKIPAWEMIRFSVNIMRGCFGGCTFCSITEHEGRIIQSRSEDSIIQEIEDIRDKVKGFTGTISDLGGPTANMYRLG
CRSPEIEAACRKPSCVYPGICQNLTTDHGPLIKIYRRGRALKGIKKILIGSGLRYDLAVKSPEYVRELVQHHVGGYLKIA
PEHTEQGPLTKMMKPGIGSYDRFKQMFEQFSEEAGKKQFLIPYFIAAHPGTSDEDMMNLAIWLKKNGFRADQVQTFYPSP
MATATAMYHSGRNTLTRVRRQMRDAAEESVDIVRGEKRRRLHKAFLRYHDPNNWPLLREALKAMGRADLIGNGKHHLIPT
FQPMTDGSYQSARRKNSTTAPAKGPAPGKLLTQHTGLPPRAGVRAGPRAGGPSSGKPAAGPRPGGAGRNKPR

Sequences:

>Translated_792_residues
MNAPVDVSFFARAAKPLTSYRPYWAKRFGTAPFLPMSREEMQQLGWDSCDVILVTGDAYVDHPSFGMAVIGRTLEAQGFR
VGIIAQPDWQSAEPFKALGRPNLFWGVTAGNMDSMINRYTADRKIRSDDAYTPGDVGGKRPDRAAIVYSQRCREAFKDVP
IILGGIEGSLRRIAHYDYWSDKVRRSIVVDAKCDLLLYGNAERALVEVAHRLAAREPVEQITDVRGTAFVRRPGDETAAG
WFEIDSTTVDEPGRVEAHVNPYLTTSEQASAQGSICSKEEGAPAAQDPNPAVQPIQFVANPALKAKLKVPPREKSVIRLP
SYEQVKSDPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVWINPPPIPLTTAEMDHVFDLPYARGPHPSYADENGS
HDGATKIPAWEMIRFSVNIMRGCFGGCTFCSITEHEGRIIQSRSEDSIIQEIEDIRDKVKGFTGTISDLGGPTANMYRLG
CRSPEIEAACRKPSCVYPGICQNLTTDHGPLIKIYRRGRALKGIKKILIGSGLRYDLAVKSPEYVRELVQHHVGGYLKIA
PEHTEQGPLTKMMKPGIGSYDRFKQMFEQFSEEAGKKQFLIPYFIAAHPGTSDEDMMNLAIWLKKNGFRADQVQTFYPSP
MATATAMYHSGRNTLTRVRRQMRDAAEESVDIVRGEKRRRLHKAFLRYHDPNNWPLLREALKAMGRADLIGNGKHHLIPT
FQPMTDGSYQSARRKNSTTAPAKGPAPGKLLTQHTGLPPRAGVRAGPRAGGPSSGKPAAGPRPGGAGRNKPR
>Mature_792_residues
MNAPVDVSFFARAAKPLTSYRPYWAKRFGTAPFLPMSREEMQQLGWDSCDVILVTGDAYVDHPSFGMAVIGRTLEAQGFR
VGIIAQPDWQSAEPFKALGRPNLFWGVTAGNMDSMINRYTADRKIRSDDAYTPGDVGGKRPDRAAIVYSQRCREAFKDVP
IILGGIEGSLRRIAHYDYWSDKVRRSIVVDAKCDLLLYGNAERALVEVAHRLAAREPVEQITDVRGTAFVRRPGDETAAG
WFEIDSTTVDEPGRVEAHVNPYLTTSEQASAQGSICSKEEGAPAAQDPNPAVQPIQFVANPALKAKLKVPPREKSVIRLP
SYEQVKSDPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVWINPPPIPLTTAEMDHVFDLPYARGPHPSYADENGS
HDGATKIPAWEMIRFSVNIMRGCFGGCTFCSITEHEGRIIQSRSEDSIIQEIEDIRDKVKGFTGTISDLGGPTANMYRLG
CRSPEIEAACRKPSCVYPGICQNLTTDHGPLIKIYRRGRALKGIKKILIGSGLRYDLAVKSPEYVRELVQHHVGGYLKIA
PEHTEQGPLTKMMKPGIGSYDRFKQMFEQFSEEAGKKQFLIPYFIAAHPGTSDEDMMNLAIWLKKNGFRADQVQTFYPSP
MATATAMYHSGRNTLTRVRRQMRDAAEESVDIVRGEKRRRLHKAFLRYHDPNNWPLLREALKAMGRADLIGNGKHHLIPT
FQPMTDGSYQSARRKNSTTAPAKGPAPGKLLTQHTGLPPRAGVRAGPRAGGPSSGKPAAGPRPGGAGRNKPR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=777, Percent_Identity=60.7464607464607, Blast_Score=940, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 87477; Mature: 87477

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPVDVSFFARAAKPLTSYRPYWAKRFGTAPFLPMSREEMQQLGWDSCDVILVTGDAYV
CCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEE
DHPSFGMAVIGRTLEAQGFRVGIIAQPDWQSAEPFKALGRPNLFWGVTAGNMDSMINRYT
CCCCCCHHHHCCHHCCCCEEEEEEECCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHH
ADRKIRSDDAYTPGDVGGKRPDRAAIVYSQRCREAFKDVPIILGGIEGSLRRIAHYDYWS
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHH
DKVRRSIVVDAKCDLLLYGNAERALVEVAHRLAAREPVEQITDVRGTAFVRRPGDETAAG
HHHHHEEEEECCCCEEEECCCHHHHHHHHHHHHHHCHHHHHHCCCCCEEEECCCCCCCCC
WFEIDSTTVDEPGRVEAHVNPYLTTSEQASAQGSICSKEEGAPAAQDPNPAVQPIQFVAN
EEEECCCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
PALKAKLKVPPREKSVIRLPSYEQVKSDPVLYAHANRVLHLETNPGNARALVQAHGEGAT
CCCEEEEECCCCCCCEEECCCHHHHCCCCEEEEECCEEEEEECCCCCCEEEEEECCCCCC
ARDVWINPPPIPLTTAEMDHVFDLPYARGPHPSYADENGSHDGATKIPAWEMIRFSVNIM
CCEEECCCCCCCEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RGCFGGCTFCSITEHEGRIIQSRSEDSIIQEIEDIRDKVKGFTGTISDLGGPTANMYRLG
HHHCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHEEEC
CRSPEIEAACRKPSCVYPGICQNLTTDHGPLIKIYRRGRALKGIKKILIGSGLRYDLAVK
CCCCCHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCEEEEEEC
SPEYVRELVQHHVGGYLKIAPEHTEQGPLTKMMKPGIGSYDRFKQMFEQFSEEAGKKQFL
CHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEE
IPYFIAAHPGTSDEDMMNLAIWLKKNGFRADQVQTFYPSPMATATAMYHSGRNTLTRVRR
EEEEEEECCCCCCHHHEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHH
QMRDAAEESVDIVRGEKRRRLHKAFLRYHDPNNWPLLREALKAMGRADLIGNGKHHLIPT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCC
FQPMTDGSYQSARRKNSTTAPAKGPAPGKLLTQHTGLPPRAGVRAGPRAGGPSSGKPAAG
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRPGGAGRNKPR
CCCCCCCCCCCC
>Mature Secondary Structure
MNAPVDVSFFARAAKPLTSYRPYWAKRFGTAPFLPMSREEMQQLGWDSCDVILVTGDAYV
CCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEE
DHPSFGMAVIGRTLEAQGFRVGIIAQPDWQSAEPFKALGRPNLFWGVTAGNMDSMINRYT
CCCCCCHHHHCCHHCCCCEEEEEEECCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHH
ADRKIRSDDAYTPGDVGGKRPDRAAIVYSQRCREAFKDVPIILGGIEGSLRRIAHYDYWS
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHH
DKVRRSIVVDAKCDLLLYGNAERALVEVAHRLAAREPVEQITDVRGTAFVRRPGDETAAG
HHHHHEEEEECCCCEEEECCCHHHHHHHHHHHHHHCHHHHHHCCCCCEEEECCCCCCCCC
WFEIDSTTVDEPGRVEAHVNPYLTTSEQASAQGSICSKEEGAPAAQDPNPAVQPIQFVAN
EEEECCCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
PALKAKLKVPPREKSVIRLPSYEQVKSDPVLYAHANRVLHLETNPGNARALVQAHGEGAT
CCCEEEEECCCCCCCEEECCCHHHHCCCCEEEEECCEEEEEECCCCCCEEEEEECCCCCC
ARDVWINPPPIPLTTAEMDHVFDLPYARGPHPSYADENGSHDGATKIPAWEMIRFSVNIM
CCEEECCCCCCCEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RGCFGGCTFCSITEHEGRIIQSRSEDSIIQEIEDIRDKVKGFTGTISDLGGPTANMYRLG
HHHCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHEEEC
CRSPEIEAACRKPSCVYPGICQNLTTDHGPLIKIYRRGRALKGIKKILIGSGLRYDLAVK
CCCCCHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCEEEEEEC
SPEYVRELVQHHVGGYLKIAPEHTEQGPLTKMMKPGIGSYDRFKQMFEQFSEEAGKKQFL
CHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEE
IPYFIAAHPGTSDEDMMNLAIWLKKNGFRADQVQTFYPSPMATATAMYHSGRNTLTRVRR
EEEEEEECCCCCCHHHEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHH
QMRDAAEESVDIVRGEKRRRLHKAFLRYHDPNNWPLLREALKAMGRADLIGNGKHHLIPT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCC
FQPMTDGSYQSARRKNSTTAPAKGPAPGKLLTQHTGLPPRAGVRAGPRAGGPSSGKPAAG
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRPGGAGRNKPR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]