Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611102
Identifier: 120611102
GI number: 120611102
Start: 2653117
End: 2654256
Strand: Direct
Name: 120611102
Synonym: Aave_2431
Alternate gene names: NA
Gene position: 2653117-2654256 (Clockwise)
Preceding gene: 120611101
Following gene: 120611106
Centisome position: 49.57
GC content: 71.67
Gene sequence:
>1140_bases ATGACCGAACGGGTGGACTTCCTCGTGGTGGGGGCCGGCATTGCCGGCGCCTCGGTCGGCTGGGAACTCGCGCATGCGGC GCCGGGTGCCAGCGTGCTCGTGCTCGAGCGCGAACCCCAGCCCGGCTACCACACCACGGGCCGCTCCGCGGCGCTTTTCA TGGAAACCTACGGCACGCCCCAGATCCGGGCGCTCACCCGTGCCAGCAGGGCGTTCTACGACCATCCTCCCGAGGGCTTC GCCGACGGCCCGATCCTTTCGCCCCGGGGCGTGGTGTACGTCGCGGGTCCGGACCAGCTCGACCTGCTGGATGCGGCGCT GGTGGACGCCCTGCAGCGTTCGCCGAACGTGCAGCGCGCCACCCGCGAGCAATTGCTGGAGTGGCTGCCGTGCCTGCGGC CGGAGGCGGTAGCGGCCGGCATGCGCGAGCCCGGCGCGGCCGACATCGATGTGCATGCCCTGCACCAGGGCTATCTGCGG GGACTGCGCCAGCGCGGTGGCCGCCTGCTGCCGGATGCCGGTGTCACCGCCATCGAAAGGGAGGCCGGCGCCTGGCACGT GCATCTCGCGTCGGGCGCCACGGTGCGGGCGCGTGCCATCGTCAACGCGGCCGGGGCCTGGGCGGACGAGGTGGCCGCCA TGGCCGGTGTCCCGGCCATCGGCCTGGAACCGCGGCGGCGCACGGCTTTCACTTTCCCGGTACCGCCCGGCATGGACGCG TCCGGCTGGCCTGCGGTGGTGGGAATCGACGAGAGCTTCTATTTCAAACCCGATGCGGGGCAACTGCTGGGTTCTCCCGC CAATGCCGATCCGACCCACCCCCACGACGTGGTGCCCGAAGAACTCGACGTGGCGACCGGCATCTGGAATATCGAGCAGA CGACGACCTTCCAGATCCGCAGGCCTTCGCACACCTGGGCGGGGCTGCGATCGTTCGTCGCGGACGGGGACATGGTCGTC GGCTGGGACAACCACGTGGACGGCTTTTTCTGGCTGGCGGGGCAGGGCGGCTACGGCATCCAGAGCGCCGCGGGTGTGGC CCTGCTGGCGCGCAACCTGCTCCTGGCCGAGCCGCTGGCACCCGCCCTGTCTTCCCAGGGCGTCGAGGCGGCCGCCCTGT CGCCAGCGCGGCTGCGCTGA
Upstream 100 bases:
>100_bases GCACGCGGCGAGCCGCGCCCGGACGGCTCGGGCAGCCGGGGGGCCGCCGAGGCGTCGGCGGTCTGACGGATTGCGGTCGA TCGGCAGGAAAGGAATCGAC
Downstream 100 bases:
>100_bases ACGCCTGCCGGAGAGGAGCGCTCAGGCGTAGGTGTTCACCTGGGTGCCGATGGAACCGGACGTGGCCAGCCGGGGCTGGG GCAGGGCTTCCAGCAACTGG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Glycine/D-Amino Acid Oxidase; Amino Acid Oxidase; FAD-Dependent Oxidoreductase; FAD Dependent Oxidoreductase Family; Oxidase; FAD Dependent Oxidoreductase Domain-Containing Protein; FAD-Dependent Glycerol-3-Phosphate Dehydrogenase Protein; Fad Dependent Oxidoreductase; Glycine Oxidase
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTERVDFLVVGAGIAGASVGWELAHAAPGASVLVLEREPQPGYHTTGRSAALFMETYGTPQIRALTRASRAFYDHPPEGF ADGPILSPRGVVYVAGPDQLDLLDAALVDALQRSPNVQRATREQLLEWLPCLRPEAVAAGMREPGAADIDVHALHQGYLR GLRQRGGRLLPDAGVTAIEREAGAWHVHLASGATVRARAIVNAAGAWADEVAAMAGVPAIGLEPRRRTAFTFPVPPGMDA SGWPAVVGIDESFYFKPDAGQLLGSPANADPTHPHDVVPEELDVATGIWNIEQTTTFQIRRPSHTWAGLRSFVADGDMVV GWDNHVDGFFWLAGQGGYGIQSAAGVALLARNLLLAEPLAPALSSQGVEAAALSPARLR
Sequences:
>Translated_379_residues MTERVDFLVVGAGIAGASVGWELAHAAPGASVLVLEREPQPGYHTTGRSAALFMETYGTPQIRALTRASRAFYDHPPEGF ADGPILSPRGVVYVAGPDQLDLLDAALVDALQRSPNVQRATREQLLEWLPCLRPEAVAAGMREPGAADIDVHALHQGYLR GLRQRGGRLLPDAGVTAIEREAGAWHVHLASGATVRARAIVNAAGAWADEVAAMAGVPAIGLEPRRRTAFTFPVPPGMDA SGWPAVVGIDESFYFKPDAGQLLGSPANADPTHPHDVVPEELDVATGIWNIEQTTTFQIRRPSHTWAGLRSFVADGDMVV GWDNHVDGFFWLAGQGGYGIQSAAGVALLARNLLLAEPLAPALSSQGVEAAALSPARLR >Mature_378_residues TERVDFLVVGAGIAGASVGWELAHAAPGASVLVLEREPQPGYHTTGRSAALFMETYGTPQIRALTRASRAFYDHPPEGFA DGPILSPRGVVYVAGPDQLDLLDAALVDALQRSPNVQRATREQLLEWLPCLRPEAVAAGMREPGAADIDVHALHQGYLRG LRQRGGRLLPDAGVTAIEREAGAWHVHLASGATVRARAIVNAAGAWADEVAAMAGVPAIGLEPRRRTAFTFPVPPGMDAS GWPAVVGIDESFYFKPDAGQLLGSPANADPTHPHDVVPEELDVATGIWNIEQTTTFQIRRPSHTWAGLRSFVADGDMVVG WDNHVDGFFWLAGQGGYGIQSAAGVALLARNLLLAEPLAPALSSQGVEAAALSPARLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24797151, Length=277, Percent_Identity=25.6317689530686, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40145; Mature: 40014
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERVDFLVVGAGIAGASVGWELAHAAPGASVLVLEREPQPGYHTTGRSAALFMETYGTP CCCCEEEEEEECCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC QIRALTRASRAFYDHPPEGFADGPILSPRGVVYVAGPDQLDLLDAALVDALQRSPNVQRA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHH TREQLLEWLPCLRPEAVAAGMREPGAADIDVHALHQGYLRGLRQRGGRLLPDAGVTAIER HHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCEEEEC EAGAWHVHLASGATVRARAIVNAAGAWADEVAAMAGVPAIGLEPRRRTAFTFPVPPGMDA CCCEEEEEECCCCEEEEHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC SGWPAVVGIDESFYFKPDAGQLLGSPANADPTHPHDVVPEELDVATGIWNIEQTTTFQIR CCCCEEEECCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCEEECCCCEEEEEE RPSHTWAGLRSFVADGDMVVGWDNHVDGFFWLAGQGGYGIQSAAGVALLARNLLLAEPLA CCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC PALSSQGVEAAALSPARLR HHHHCCCCCHHCCCCHHCC >Mature Secondary Structure TERVDFLVVGAGIAGASVGWELAHAAPGASVLVLEREPQPGYHTTGRSAALFMETYGTP CCCEEEEEEECCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC QIRALTRASRAFYDHPPEGFADGPILSPRGVVYVAGPDQLDLLDAALVDALQRSPNVQRA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHH TREQLLEWLPCLRPEAVAAGMREPGAADIDVHALHQGYLRGLRQRGGRLLPDAGVTAIER HHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCEEEEC EAGAWHVHLASGATVRARAIVNAAGAWADEVAAMAGVPAIGLEPRRRTAFTFPVPPGMDA CCCEEEEEECCCCEEEEHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC SGWPAVVGIDESFYFKPDAGQLLGSPANADPTHPHDVVPEELDVATGIWNIEQTTTFQIR CCCCEEEECCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCEEECCCCEEEEEE RPSHTWAGLRSFVADGDMVVGWDNHVDGFFWLAGQGGYGIQSAAGVALLARNLLLAEPLA CCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC PALSSQGVEAAALSPARLR HHHHCCCCCHHCCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA