Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611042
Identifier: 120611042
GI number: 120611042
Start: 2585328
End: 2586377
Strand: Direct
Name: 120611042
Synonym: Aave_2371
Alternate gene names: NA
Gene position: 2585328-2586377 (Clockwise)
Preceding gene: 120611041
Following gene: 120611043
Centisome position: 48.3
GC content: 69.81
Gene sequence:
>1050_bases GTGAACCGCGGAAGGTTCAACGGATTTGCGATCAACGGTCCCGCCGGGGAGCAGGTTGTTCGCGTCCGCGTTGATGCACG GGGCTACGCACGTATCCGCGCAGGCGGCCGTGTGCTTGCCTATGCGCGCGTGCACAGCGAGCCTGCTGCCAGCTTGGCGG GCCGCCTGGGCCGGGTCGAGGCCCACATCCGTGCCGACGCCATCGCGCGGGCGGCTGTCGTTGGGGCTCTCGGGCACGCG GAGGTCCATGGGCTGATCGCCGCGCGTGGGCGCGCCGTCATCAAGGTGACGCTGCCGCCTGTGCGTGGCGTGGTCAGCGC CAAGGCCCGCGCCAGCATTGGACTGCGCGCACACGTCCTGGCGCGGGGTGGTGCCTCGGGCACGGCCCGCGCCAAGCTCT CGCCGGCCACGCGCCTTGTCCGCCGTGGCCCGGTCCGGTCCACGCCCTTCGCCGGCATCACTGCGGACGGCACGGTGTTC GCGCGCCGCCGCGTCCGATCGCCTGTCGATGCGAGGGCCCAGGCCTTCATCGTGACGCGCACTCGGACCTCTGCCCGGCT GGCGGTGCTACTGCGCGCCGCGGCGGCCGGCACCGCCCGCTTCCACGTCGGCGCGCGTGGTCCAGTTGCCGTGCTCGGGC GAGCGGTCATTGAGATCGACCCCGATGTGTTCAAGCGGTTGCCGTTTGACGAGCCCGCGCCCGAATCGCGCACGTTCCTC GTGCCGCCCACCATGACCACCTTCTATGTGACCGACCAGGGCACCAGCATGTTCAGAGCCAGCCCCCCACAACAGCCCGC CGACGTGCAGGACTACGACATCGAATTCGCCGAGTGGTTTCCGCCCGGCGACGAGATCGTGGCCGTGGCGCTCAAGGTGA TGCCGGCCATGCCCATGCCGCCCAGTTACGCAATCACGGCCCAACGCGTGAAGGTGTGGGTGTACGCGGGCGGCAAGAGC GGCACGAAGTACCAGATTTCCATCGCGGCGACCACCAACGACGGCCGCGTCAAGGAGGTGGAACTGGTCGTACCCATCAA GGAGCAGTGA
Upstream 100 bases:
>100_bases CCCGCGCACGCTCCAGATCAATGACGTGTTCGTGGTGGACAGCCAGACGCTGACGGGGGACTTCACCCTGCAGCTGATGT AACCGCGCGGGCGGCAGGAC
Downstream 100 bases:
>100_bases CATGCCCCAGCTCTACCTGAACAACTTCACCACGCAATTCATCGCGTCCGTCAAGGCCGCGCCGGCCACCGCCAACCCGG CGGGCGAACTGGACTACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNRGRFNGFAINGPAGEQVVRVRVDARGYARIRAGGRVLAYARVHSEPAASLAGRLGRVEAHIRADAIARAAVVGALGHA EVHGLIAARGRAVIKVTLPPVRGVVSAKARASIGLRAHVLARGGASGTARAKLSPATRLVRRGPVRSTPFAGITADGTVF ARRRVRSPVDARAQAFIVTRTRTSARLAVLLRAAAAGTARFHVGARGPVAVLGRAVIEIDPDVFKRLPFDEPAPESRTFL VPPTMTTFYVTDQGTSMFRASPPQQPADVQDYDIEFAEWFPPGDEIVAVALKVMPAMPMPPSYAITAQRVKVWVYAGGKS GTKYQISIAATTNDGRVKEVELVVPIKEQ
Sequences:
>Translated_349_residues MNRGRFNGFAINGPAGEQVVRVRVDARGYARIRAGGRVLAYARVHSEPAASLAGRLGRVEAHIRADAIARAAVVGALGHA EVHGLIAARGRAVIKVTLPPVRGVVSAKARASIGLRAHVLARGGASGTARAKLSPATRLVRRGPVRSTPFAGITADGTVF ARRRVRSPVDARAQAFIVTRTRTSARLAVLLRAAAAGTARFHVGARGPVAVLGRAVIEIDPDVFKRLPFDEPAPESRTFL VPPTMTTFYVTDQGTSMFRASPPQQPADVQDYDIEFAEWFPPGDEIVAVALKVMPAMPMPPSYAITAQRVKVWVYAGGKS GTKYQISIAATTNDGRVKEVELVVPIKEQ >Mature_349_residues MNRGRFNGFAINGPAGEQVVRVRVDARGYARIRAGGRVLAYARVHSEPAASLAGRLGRVEAHIRADAIARAAVVGALGHA EVHGLIAARGRAVIKVTLPPVRGVVSAKARASIGLRAHVLARGGASGTARAKLSPATRLVRRGPVRSTPFAGITADGTVF ARRRVRSPVDARAQAFIVTRTRTSARLAVLLRAAAAGTARFHVGARGPVAVLGRAVIEIDPDVFKRLPFDEPAPESRTFL VPPTMTTFYVTDQGTSMFRASPPQQPADVQDYDIEFAEWFPPGDEIVAVALKVMPAMPMPPSYAITAQRVKVWVYAGGKS GTKYQISIAATTNDGRVKEVELVVPIKEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37198; Mature: 37198
Theoretical pI: Translated: 11.88; Mature: 11.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRGRFNGFAINGPAGEQVVRVRVDARGYARIRAGGRVLAYARVHSEPAASLAGRLGRVE CCCCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCEEEEEEEECCCHHHHHHHHHCCEE AHIRADAIARAAVVGALGHAEVHGLIAARGRAVIKVTLPPVRGVVSAKARASIGLRAHVL EHHHHHHHHHHHHHHHCCCHHHHEEEEECCCEEEEEECCCCCCHHHHHHHHCCCEEEEEE ARGGASGTARAKLSPATRLVRRGPVRSTPFAGITADGTVFARRRVRSPVDARAQAFIVTR EECCCCCCCEEECCHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCCEEEEEEE TRTSARLAVLLRAAAAGTARFHVGARGPVAVLGRAVIEIDPDVFKRLPFDEPAPESRTFL CCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHCEEEEEECHHHHHHCCCCCCCCCCCEEE VPPTMTTFYVTDQGTSMFRASPPQQPADVQDYDIEFAEWFPPGDEIVAVALKVMPAMPMP ECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCC PSYAITAQRVKVWVYAGGKSGTKYQISIAATTNDGRVKEVELVVPIKEQ CCEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEEECCC >Mature Secondary Structure MNRGRFNGFAINGPAGEQVVRVRVDARGYARIRAGGRVLAYARVHSEPAASLAGRLGRVE CCCCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCEEEEEEEECCCHHHHHHHHHCCEE AHIRADAIARAAVVGALGHAEVHGLIAARGRAVIKVTLPPVRGVVSAKARASIGLRAHVL EHHHHHHHHHHHHHHHCCCHHHHEEEEECCCEEEEEECCCCCCHHHHHHHHCCCEEEEEE ARGGASGTARAKLSPATRLVRRGPVRSTPFAGITADGTVFARRRVRSPVDARAQAFIVTR EECCCCCCCEEECCHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCCEEEEEEE TRTSARLAVLLRAAAAGTARFHVGARGPVAVLGRAVIEIDPDVFKRLPFDEPAPESRTFL CCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHCEEEEEECHHHHHHCCCCCCCCCCCEEE VPPTMTTFYVTDQGTSMFRASPPQQPADVQDYDIEFAEWFPPGDEIVAVALKVMPAMPMP ECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCC PSYAITAQRVKVWVYAGGKSGTKYQISIAATTNDGRVKEVELVVPIKEQ CCEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA