Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611041
Identifier: 120611041
GI number: 120611041
Start: 2584893
End: 2585309
Strand: Direct
Name: 120611041
Synonym: Aave_2370
Alternate gene names: NA
Gene position: 2584893-2585309 (Clockwise)
Preceding gene: 120611040
Following gene: 120611042
Centisome position: 48.29
GC content: 66.19
Gene sequence:
>417_bases ATGGCCGGTTTCTCCAACTCCCTCGCCAATGCGGTCATCAACGCCACGCTGCGCCAGCAGGCGTTCCCTGCGATCCGCAC CCCGTACTTCGCGCTGTTCACGGCCGACCCTACCGATGCCTTCACGGCCGGAACCGAGGTTGCCGCATCGTGGTATCGCC GCGTGCCCACCGGCGCGTTTGCCTCGCCCGTGAACGGTGGCACCTACAACGCGGTGCGCGCCGAGTTCCCGCCGGTGAGC GGGGCCCAGGTCACGGTGACGCACATTGGCATCCTGGAGGGCGACTCCCTGAACGATCCCACTGCCACGCTCATGTATTC GGAGCCGCTGGCCAGCCCGCGCACGCTCCAGATCAATGACGTGTTCGTGGTGGACAGCCAGACGCTGACGGGGGACTTCA CCCTGCAGCTGATGTAA
Upstream 100 bases:
>100_bases CGTCCAACGAGGTGGCGCCGACCATGTGACAAGCCTGCCATCCTGGCAGCACATTTTCGTAACCGGGGCGCTGGAGTGCT CGAAACCACAGGAGGCCTCC
Downstream 100 bases:
>100_bases CCGCGCGGGCGGCAGGACGTGAACCGCGGAAGGTTCAACGGATTTGCGATCAACGGTCCCGCCGGGGAGCAGGTTGTTCG CGTCCGCGTTGATGCACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAGFSNSLANAVINATLRQQAFPAIRTPYFALFTADPTDAFTAGTEVAASWYRRVPTGAFASPVNGGTYNAVRAEFPPVS GAQVTVTHIGILEGDSLNDPTATLMYSEPLASPRTLQINDVFVVDSQTLTGDFTLQLM
Sequences:
>Translated_138_residues MAGFSNSLANAVINATLRQQAFPAIRTPYFALFTADPTDAFTAGTEVAASWYRRVPTGAFASPVNGGTYNAVRAEFPPVS GAQVTVTHIGILEGDSLNDPTATLMYSEPLASPRTLQINDVFVVDSQTLTGDFTLQLM >Mature_137_residues AGFSNSLANAVINATLRQQAFPAIRTPYFALFTADPTDAFTAGTEVAASWYRRVPTGAFASPVNGGTYNAVRAEFPPVSG AQVTVTHIGILEGDSLNDPTATLMYSEPLASPRTLQINDVFVVDSQTLTGDFTLQLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14677; Mature: 14545
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFSNSLANAVINATLRQQAFPAIRTPYFALFTADPTDAFTAGTEVAASWYRRVPTGAF CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHCCCCCC ASPVNGGTYNAVRAEFPPVSGAQVTVTHIGILEGDSLNDPTATLMYSEPLASPRTLQIND CCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEE VFVVDSQTLTGDFTLQLM EEEECCCEECCEEEEEEC >Mature Secondary Structure AGFSNSLANAVINATLRQQAFPAIRTPYFALFTADPTDAFTAGTEVAASWYRRVPTGAF CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHCCCCCC ASPVNGGTYNAVRAEFPPVSGAQVTVTHIGILEGDSLNDPTATLMYSEPLASPRTLQIND CCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEE VFVVDSQTLTGDFTLQLM EEEECCCEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA