Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611003
Identifier: 120611003
GI number: 120611003
Start: 2559115
End: 2559606
Strand: Reverse
Name: 120611003
Synonym: Aave_2331
Alternate gene names: NA
Gene position: 2559606-2559115 (Counterclockwise)
Preceding gene: 120611004
Following gene: 120611002
Centisome position: 47.82
GC content: 69.11
Gene sequence:
>492_bases ATGCACCAGACTGCCACCACCCCCGGCTACGCCGCCGCATCCGTCCTGCCGGGCGGGCGCGGGCCCGCACTCCACGTCAC CGGCTTCCAGCTGCGCGATGCCCTGAGCCTGATCGCTCCCGATGGAACCGCAGAACAGCTGTCCGCAATGCTCTGCATCC AGGCCGGGCCCGAGCGCCAAACGGCGCGTGGCGTTGAGCCCCAGGGGCTCTACTGCTGGATGAGCCAGTACCCCGAAGAG GGCACCGTCCGGCTGGACGAAACGGCCAATCCAGACGTGGAGCAAGCCAGCCACGGCTCGGATGCCGTGCGCGTGGCGCG CCGCCTGATCGCCGCGGCCCGCTGGCTGAACCGCCATGTCGATTTCCGCAACCTGTCCGACGCACGGGAAGACGCCCACG CGCTGGCGAACCTCATCTTGCGCGAGACGAAACCGCTGATGGACGCCCACATGCGCACTCTCACCAGCATCAGGACGGAG GGGGCAGGCTGA
Upstream 100 bases:
>100_bases GCAACGCGCGTGCGAGCCCGGCGCCACCGCCGTGTGGATCGACCGCAGCACCGTCGAATGCCTGCGCGAGCGGCCTTGAC CAGCACCAGGAGGCACCCCC
Downstream 100 bases:
>100_bases TGAGCACACGCATTTCCATGTACCCGCCTGGCGGATCCGCCGGCCGACGCAGCGAGCAACCCGAACGCCGCCGCGAGCAG CAGCCCCCTGTGGCTCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MHQTATTPGYAAASVLPGGRGPALHVTGFQLRDALSLIAPDGTAEQLSAMLCIQAGPERQTARGVEPQGLYCWMSQYPEE GTVRLDETANPDVEQASHGSDAVRVARRLIAAARWLNRHVDFRNLSDAREDAHALANLILRETKPLMDAHMRTLTSIRTE GAG
Sequences:
>Translated_163_residues MHQTATTPGYAAASVLPGGRGPALHVTGFQLRDALSLIAPDGTAEQLSAMLCIQAGPERQTARGVEPQGLYCWMSQYPEE GTVRLDETANPDVEQASHGSDAVRVARRLIAAARWLNRHVDFRNLSDAREDAHALANLILRETKPLMDAHMRTLTSIRTE GAG >Mature_163_residues MHQTATTPGYAAASVLPGGRGPALHVTGFQLRDALSLIAPDGTAEQLSAMLCIQAGPERQTARGVEPQGLYCWMSQYPEE GTVRLDETANPDVEQASHGSDAVRVARRLIAAARWLNRHVDFRNLSDAREDAHALANLILRETKPLMDAHMRTLTSIRTE GAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17653; Mature: 17653
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQTATTPGYAAASVLPGGRGPALHVTGFQLRDALSLIAPDGTAEQLSAMLCIQAGPERQ CCCCCCCCCCHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH TARGVEPQGLYCWMSQYPEEGTVRLDETANPDVEQASHGSDAVRVARRLIAAARWLNRHV HHCCCCCCCEEEEHHHCCCCCCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC DFRNLSDAREDAHALANLILRETKPLMDAHMRTLTSIRTEGAG CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHQTATTPGYAAASVLPGGRGPALHVTGFQLRDALSLIAPDGTAEQLSAMLCIQAGPERQ CCCCCCCCCCHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH TARGVEPQGLYCWMSQYPEEGTVRLDETANPDVEQASHGSDAVRVARRLIAAARWLNRHV HHCCCCCCCEEEEHHHCCCCCCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC DFRNLSDAREDAHALANLILRETKPLMDAHMRTLTSIRTEGAG CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA