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The map label for this gene is 120611002

Identifier: 120611002

GI number: 120611002

Start: 2558495

End: 2558983

Strand: Reverse

Name: 120611002

Synonym: Aave_2330

Alternate gene names: NA

Gene position: 2558983-2558495 (Counterclockwise)

Preceding gene: 120611003

Following gene: 120611001

Centisome position: 47.81

GC content: 69.73

Gene sequence:

>489_bases
ATGCAGGCACGGGGCTACGCCGCAATCGGACTACACCGTCCGAAGAACGTGCTGAACATGGGCGAGGTGATGCGGGCGGC
GGGGTGCTACGACGTTCGCCTCGTGGCCGTGGCGGGCCATCGCTTCGCCCGCGCACCCACCGATACGCAGGAGGCCTGGA
AGCACATCCCCACCATCGAGGTGCCGGCGTTGCTGGATGCCATGCCGGTGGGCGCCGTCCCCGTGGCCGTGGAGTTCATC
CCCAGCGCCACGCCCCTGCCGCAATTCGTGCACCCGGAGCGCGCCTTCTACATCCTCGGCCCGGAGGACGGCAGCCTGCC
GGCGGAGATCGTGCAGCAGTGCCGCCATGTCGTATTCGTGCCCACGCGGTTCTGCATGAACCTCGCCGCCACGGTCAACG
TGCTGCTGTACGACCGCCTGGCCAAGCAGCCCCGGCGGCCAGGCGTTCGCCACAGCAGCAGCTCCGAAGCCCCGGTCGCG
ACGGCCTGA

Upstream 100 bases:

>100_bases
CGGATCCGCCGGCCGACGCAGCGAGCAACCCGAACGCCGCCGCGAGCAGCAGCCCCCTGTGGCTCCGCCGCCTGCGGATA
GTGCACCCGCGATCGCCGCC

Downstream 100 bases:

>100_bases
CCGCCCTCCCCCCCCCGCCTGACCCGCGCGGGCCGGGCGAAACCCCACCTTCAAGAAAGCCCATCCATGAATACCAGCGC
ACACGCCGCCCCGGAGGCTG

Product: tRNA/rRNA methyltransferase SpoU

Products: NA

Alternate protein names: RNA Methyltransferase; 23S RRNA Methyltransferase; RNA Methyltransferase TrmH Family; TrmH Family RNA Methyltransferase; Cold-Shock RNA Methyltransferase; rRNA Methylase; TRNA/RRNA MethyltransferaU; SpoU RRNA Methylase Family Protein; rRNA Methyltransferase; rRNA Methylase-Family Protein; SpoU Class RRNA Methylase

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MQARGYAAIGLHRPKNVLNMGEVMRAAGCYDVRLVAVAGHRFARAPTDTQEAWKHIPTIEVPALLDAMPVGAVPVAVEFI
PSATPLPQFVHPERAFYILGPEDGSLPAEIVQQCRHVVFVPTRFCMNLAATVNVLLYDRLAKQPRRPGVRHSSSSEAPVA
TA

Sequences:

>Translated_162_residues
MQARGYAAIGLHRPKNVLNMGEVMRAAGCYDVRLVAVAGHRFARAPTDTQEAWKHIPTIEVPALLDAMPVGAVPVAVEFI
PSATPLPQFVHPERAFYILGPEDGSLPAEIVQQCRHVVFVPTRFCMNLAATVNVLLYDRLAKQPRRPGVRHSSSSEAPVA
TA
>Mature_162_residues
MQARGYAAIGLHRPKNVLNMGEVMRAAGCYDVRLVAVAGHRFARAPTDTQEAWKHIPTIEVPALLDAMPVGAVPVAVEFI
PSATPLPQFVHPERAFYILGPEDGSLPAEIVQQCRHVVFVPTRFCMNLAATVNVLLYDRLAKQPRRPGVRHSSSSEAPVA
TA

Specific function: Unknown

COG id: COG0219

COG function: function code J; Predicted rRNA methylase (SpoU class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17630; Mature: 17630

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARGYAAIGLHRPKNVLNMGEVMRAAGCYDVRLVAVAGHRFARAPTDTQEAWKHIPTIE
CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCHHHHHHHCCCCC
VPALLDAMPVGAVPVAVEFIPSATPLPQFVHPERAFYILGPEDGSLPAEIVQQCRHVVFV
HHHHHHHCCCCCHHHHEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHEEEC
PTRFCMNLAATVNVLLYDRLAKQPRRPGVRHSSSSEAPVATA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQARGYAAIGLHRPKNVLNMGEVMRAAGCYDVRLVAVAGHRFARAPTDTQEAWKHIPTIE
CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCHHHHHHHCCCCC
VPALLDAMPVGAVPVAVEFIPSATPLPQFVHPERAFYILGPEDGSLPAEIVQQCRHVVFV
HHHHHHHCCCCCHHHHEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHEEEC
PTRFCMNLAATVNVLLYDRLAKQPRRPGVRHSSSSEAPVATA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA