Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611000
Identifier: 120611000
GI number: 120611000
Start: 2556847
End: 2557704
Strand: Reverse
Name: 120611000
Synonym: Aave_2328
Alternate gene names: NA
Gene position: 2557704-2556847 (Counterclockwise)
Preceding gene: 120611001
Following gene: 120610999
Centisome position: 47.78
GC content: 70.86
Gene sequence:
>858_bases ATGATTCCCCACACCACTGATGCACGCGCGCGCCAGGCGCTGCGCGACCTCGAGCATGCCGTCGGTGCGTTGGAGCGCCT GCGCACCGATGACCAGCACAAAGACATGGTGCTGGCCGGCCAAGGCCCCGCCATGGACCTTCTGGCGGAGGCTCGGCGGA ATGCGCGCGCCGTTCTGAACGACACAGCCCCGCGGCATGCCGAGAAGCCCGCCGAAACGGCGATGGTCGATGCTGCCATG ACCGAGATGCAGCACATCGTCCCGCCTCTGACGCGCACCCAGTGCAGCCGGCTGGTCCGCGCGGCCATGGCGGCAGCCGG CGGTGCGGCAGCAGCAGCCCCCCAGCGCCCCGCCCTCCCCAGCACCGGCGAGCAGACCGAGGCGCGGAAAGCAGCGGCAG CGCTGGCCACCCTCATCGAGGAAGCTCAGGGCCACGCCATCGCCATCCCGCCAATGGCCGCCACCGCGCTACGCACGGTG CTCCACGCCGCGCCGCCGGCTCGCGAGAAGGTCTACCCCCTGCTGCCCAAGCCTGACCATTCCGTTGACGGTGGCACGCA GACCTTCTACCGCCCAGACCAGATGCGCCGGTACGCGGACGACACGGAAGCGCTCCGTGATGCCTCCGCCGAGCACGGGC CCGTGTACGTCACCCGGCTGCACGTCACCGAACTGCACGGCACGCACCACCGGGATGGCAGTGTGCGCGGCGCGTGGTCG CGGTCCTACGACACGCTGATGCAGAGCCGGCTGCCGCCGCGCTGGATAGACCGGCTCCCACAGCGCGCGGCCCGGGCGGA CATGGCAAGCAAGGCGGGCGCCGCAGCCTGCCCTTCGGACACTGAAAGGACCATATGA
Upstream 100 bases:
>100_bases GTGCTGAACGACATCGCAGAGCTGTTCGGCGATCGACTGCCCGAGCGCGACGTGTTCCCGGTGCAATGAGCCCCGTGAGC CCCAGCAGAAGGAGCAAATC
Downstream 100 bases:
>100_bases ACGACAGCAGCACCACCGCCAGCGGCGCAGCGCAGCCCGACCTGCGGACCGTAGTGAACTTCCTGTGCGGGAACGGCATG CTCCTCGGCCGCTGGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MIPHTTDARARQALRDLEHAVGALERLRTDDQHKDMVLAGQGPAMDLLAEARRNARAVLNDTAPRHAEKPAETAMVDAAM TEMQHIVPPLTRTQCSRLVRAAMAAAGGAAAAAPQRPALPSTGEQTEARKAAAALATLIEEAQGHAIAIPPMAATALRTV LHAAPPAREKVYPLLPKPDHSVDGGTQTFYRPDQMRRYADDTEALRDASAEHGPVYVTRLHVTELHGTHHRDGSVRGAWS RSYDTLMQSRLPPRWIDRLPQRAARADMASKAGAAACPSDTERTI
Sequences:
>Translated_285_residues MIPHTTDARARQALRDLEHAVGALERLRTDDQHKDMVLAGQGPAMDLLAEARRNARAVLNDTAPRHAEKPAETAMVDAAM TEMQHIVPPLTRTQCSRLVRAAMAAAGGAAAAAPQRPALPSTGEQTEARKAAAALATLIEEAQGHAIAIPPMAATALRTV LHAAPPAREKVYPLLPKPDHSVDGGTQTFYRPDQMRRYADDTEALRDASAEHGPVYVTRLHVTELHGTHHRDGSVRGAWS RSYDTLMQSRLPPRWIDRLPQRAARADMASKAGAAACPSDTERTI >Mature_285_residues MIPHTTDARARQALRDLEHAVGALERLRTDDQHKDMVLAGQGPAMDLLAEARRNARAVLNDTAPRHAEKPAETAMVDAAM TEMQHIVPPLTRTQCSRLVRAAMAAAGGAAAAAPQRPALPSTGEQTEARKAAAALATLIEEAQGHAIAIPPMAATALRTV LHAAPPAREKVYPLLPKPDHSVDGGTQTFYRPDQMRRYADDTEALRDASAEHGPVYVTRLHVTELHGTHHRDGSVRGAWS RSYDTLMQSRLPPRWIDRLPQRAARADMASKAGAAACPSDTERTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30824; Mature: 30824
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPHTTDARARQALRDLEHAVGALERLRTDDQHKDMVLAGQGPAMDLLAEARRNARAVLN CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH DTAPRHAEKPAETAMVDAAMTEMQHIVPPLTRTQCSRLVRAAMAAAGGAAAAAPQRPALP CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC STGEQTEARKAAAALATLIEEAQGHAIAIPPMAATALRTVLHAAPPAREKVYPLLPKPDH CCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCC SVDGGTQTFYRPDQMRRYADDTEALRDASAEHGPVYVTRLHVTELHGTHHRDGSVRGAWS CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCHH RSYDTLMQSRLPPRWIDRLPQRAARADMASKAGAAACPSDTERTI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MIPHTTDARARQALRDLEHAVGALERLRTDDQHKDMVLAGQGPAMDLLAEARRNARAVLN CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH DTAPRHAEKPAETAMVDAAMTEMQHIVPPLTRTQCSRLVRAAMAAAGGAAAAAPQRPALP CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC STGEQTEARKAAAALATLIEEAQGHAIAIPPMAATALRTVLHAAPPAREKVYPLLPKPDH CCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCC SVDGGTQTFYRPDQMRRYADDTEALRDASAEHGPVYVTRLHVTELHGTHHRDGSVRGAWS CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCHH RSYDTLMQSRLPPRWIDRLPQRAARADMASKAGAAACPSDTERTI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA