Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611001
Identifier: 120611001
GI number: 120611001
Start: 2557736
End: 2558428
Strand: Reverse
Name: 120611001
Synonym: Aave_2329
Alternate gene names: NA
Gene position: 2558428-2557736 (Counterclockwise)
Preceding gene: 120611002
Following gene: 120611000
Centisome position: 47.8
GC content: 68.4
Gene sequence:
>693_bases ATGAATACCAGCGCACACGCCGCCCCGGAGGCTGCGACCCACACGACGGCCGAACTGCTCCTCCACCTGACCCTCGCCTA CAGCGAACCCGGCAACGCGGCGTTCCCCGACGCACAGGCGCGGATCCGCAAGGGGTTCGATGCCGTCATTGCCGCACTGC GGCGGCAGCCCGGCATCCCCGCGGCCGACATCGCCGCGCTGGTCGATGCCGCCGCGGCGGGCGCGCGGTTCGATGAGATC GCCGCGCCTGTCGCGGGGCTCACGAGCAAGCTCCCCGATGAGGAGTTCTTCAACGCCCTGCGCGAATCGGGCATGTTGGA CGGGCTGGACTTGCGCGAGCGGCCGGCACCGGCCCTGCCGCCCCACCACCCGAAGTTCGTGGAAGCGATGGAGCGCCTGA ACGAACTGCAGGAACTGCATGGCGACGCCGTGGTGCAGATGCCGGAGAACCGGCAGCTGTGGGACCAGGCTGTGCGGCAC GCGCCGCCGCTGTTCCTGCAGGCCATTCGTGAGGTCGCCGCGGAAATGAAGATGCTGCCCGAGACGAAATTCGTGGACGC CAGCGGCCAGCCCGTCTACTCCGCCGAGCAGATCGCGGACATGTTGGGCATGCCGGTGAACGAAGTGCTGAACGACATCG CAGAGCTGTTCGGCGATCGACTGCCCGAGCGCGACGTGTTCCCGGTGCAATGA
Upstream 100 bases:
>100_bases CAGCAGCTCCGAAGCCCCGGTCGCGACGGCCTGACCGCCCTCCCCCCCCCGCCTGACCCGCGCGGGCCGGGCGAAACCCC ACCTTCAAGAAAGCCCATCC
Downstream 100 bases:
>100_bases GCCCCGTGAGCCCCAGCAGAAGGAGCAAATCATGATTCCCCACACCACTGATGCACGCGCGCGCCAGGCGCTGCGCGACC TCGAGCATGCCGTCGGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNTSAHAAPEAATHTTAELLLHLTLAYSEPGNAAFPDAQARIRKGFDAVIAALRRQPGIPAADIAALVDAAAAGARFDEI AAPVAGLTSKLPDEEFFNALRESGMLDGLDLRERPAPALPPHHPKFVEAMERLNELQELHGDAVVQMPENRQLWDQAVRH APPLFLQAIREVAAEMKMLPETKFVDASGQPVYSAEQIADMLGMPVNEVLNDIAELFGDRLPERDVFPVQ
Sequences:
>Translated_230_residues MNTSAHAAPEAATHTTAELLLHLTLAYSEPGNAAFPDAQARIRKGFDAVIAALRRQPGIPAADIAALVDAAAAGARFDEI AAPVAGLTSKLPDEEFFNALRESGMLDGLDLRERPAPALPPHHPKFVEAMERLNELQELHGDAVVQMPENRQLWDQAVRH APPLFLQAIREVAAEMKMLPETKFVDASGQPVYSAEQIADMLGMPVNEVLNDIAELFGDRLPERDVFPVQ >Mature_230_residues MNTSAHAAPEAATHTTAELLLHLTLAYSEPGNAAFPDAQARIRKGFDAVIAALRRQPGIPAADIAALVDAAAAGARFDEI AAPVAGLTSKLPDEEFFNALRESGMLDGLDLRERPAPALPPHHPKFVEAMERLNELQELHGDAVVQMPENRQLWDQAVRH APPLFLQAIREVAAEMKMLPETKFVDASGQPVYSAEQIADMLGMPVNEVLNDIAELFGDRLPERDVFPVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24994; Mature: 24994
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSAHAAPEAATHTTAELLLHLTLAYSEPGNAAFPDAQARIRKGFDAVIAALRRQPGIP CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC AADIAALVDAAAAGARFDEIAAPVAGLTSKLPDEEFFNALRESGMLDGLDLRERPAPALP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC PHHPKFVEAMERLNELQELHGDAVVQMPENRQLWDQAVRHAPPLFLQAIREVAAEMKMLP CCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC ETKFVDASGQPVYSAEQIADMLGMPVNEVLNDIAELFGDRLPERDVFPVQ CCCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNTSAHAAPEAATHTTAELLLHLTLAYSEPGNAAFPDAQARIRKGFDAVIAALRRQPGIP CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC AADIAALVDAAAAGARFDEIAAPVAGLTSKLPDEEFFNALRESGMLDGLDLRERPAPALP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC PHHPKFVEAMERLNELQELHGDAVVQMPENRQLWDQAVRHAPPLFLQAIREVAAEMKMLP CCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC ETKFVDASGQPVYSAEQIADMLGMPVNEVLNDIAELFGDRLPERDVFPVQ CCCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA