Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is tilS [H]
Identifier: 120610995
GI number: 120610995
Start: 2551771
End: 2552814
Strand: Direct
Name: tilS [H]
Synonym: Aave_2323
Alternate gene names: 120610995
Gene position: 2551771-2552814 (Clockwise)
Preceding gene: 120610994
Following gene: 120610996
Centisome position: 47.67
GC content: 73.37
Gene sequence:
>1044_bases ATGACGCTGGCTTTCGATACGGCCATGGACCGTTTCCGGCCGGCGCTGCCCCTGGGCGTGGCGCTGAGCGGCGGGGCGGA TTCGACGGCGCTGCTGCACGCCTGCGCGCAGCGCTGGCCGGGGCAGGTGCATGCGCTGCACGTGCACCATGGATTGCAGG CCGCGGCGGATGGTTTCGAAACTCATTGCCGGGCGCTCTGCGGGCGGCTGGGTGTGCCGCTGCGCATCGCGCGTGTGGAT GCGCGCCATGCTGGGGGTGAGAGCCCCGAGGATGCGGCCCGGCAGCGGCGCTATGAAGCCCTGCGGGACCTGGCCGGCGG CCAGCAGGGAGCCCATCAGGCAGGTACGGACGGGGTCATGCCGGAGATGGAAGCGGGGCAGGGCGGACCGGGAGGCGATG GGGACCCGGATAGGCCCGCGGCCGGGCGACCCGTGCTGGCCTCCGTTGCGCTGGCCCAGCATGCCGACGACCAGGTGGAA ACCGTGTTGCTCGCGCTCTCGCGCGGCGCCGGGGTGGCGGGGCTCGCCGCCATGCCGGCCTTCTGGCGGCGGGGCGGCAT CGACTGGCACCGGCCGCTGCTGGACGTCGCAGGCGCGGACGTACGCGCCTGGCTGACCGCGCGCGGCGAGGGCTGGGTCG AGGATCCGACGAACGCGGACGAGCGCTATACCCGAAACCGCATCCGCGCGGGGCTGCTGCCGGCGCTGCAGGCCGCGTTT CCCCAGTTCCGCGACACCTTCGCGCGCAGTGCCTCGCACGCGGCGGAAGCTGCCGTGCTGCTGCGCGAACTGGCCGGGGC CGATCTGCAGGCCACGGGCCTTCCTCCGCGCATCGCCGTGCTGCGCGCGCTGGGCCGGGAACGCCAGGCCAACCTCCTGC GCCACTGGCTGCGCACGGCGCATGCCACCACGCCCACGGCTGCGCAGTTGGGCGAACTGCTCGACCAGATCGCTGCCTGC GCCACGCGCGGCCACCGCATCCGCATCAAAGTGGGACGGGGCTTCGTGGTGCGCCAGGGCGACGAGCTCGGTTGGTACAA TTGA
Upstream 100 bases:
>100_bases CTGCGCCACGAATGATTGATATGTTCAGGGCATTCGTATCCATGCCTGCTGCACGGCCCTTCGGGGCCGTTTTCGTTTTC CCTGGGCGAGGGGCGGCGCG
Downstream 100 bases:
>100_bases CGGGTTTTGGTCTTCTCTCTCATTCGCACGAAACACGGCGGCGCGCCAAAACACCTCAGCCACAGAGCATAGGGTGCCTA CGAGGTCCCGGGGCCTGTGA
Product: tRNA(Ile)-lysidine synthetase
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTLAFDTAMDRFRPALPLGVALSGGADSTALLHACAQRWPGQVHALHVHHGLQAAADGFETHCRALCGRLGVPLRIARVD ARHAGGESPEDAARQRRYEALRDLAGGQQGAHQAGTDGVMPEMEAGQGGPGGDGDPDRPAAGRPVLASVALAQHADDQVE TVLLALSRGAGVAGLAAMPAFWRRGGIDWHRPLLDVAGADVRAWLTARGEGWVEDPTNADERYTRNRIRAGLLPALQAAF PQFRDTFARSASHAAEAAVLLRELAGADLQATGLPPRIAVLRALGRERQANLLRHWLRTAHATTPTAAQLGELLDQIAAC ATRGHRIRIKVGRGFVVRQGDELGWYN
Sequences:
>Translated_347_residues MTLAFDTAMDRFRPALPLGVALSGGADSTALLHACAQRWPGQVHALHVHHGLQAAADGFETHCRALCGRLGVPLRIARVD ARHAGGESPEDAARQRRYEALRDLAGGQQGAHQAGTDGVMPEMEAGQGGPGGDGDPDRPAAGRPVLASVALAQHADDQVE TVLLALSRGAGVAGLAAMPAFWRRGGIDWHRPLLDVAGADVRAWLTARGEGWVEDPTNADERYTRNRIRAGLLPALQAAF PQFRDTFARSASHAAEAAVLLRELAGADLQATGLPPRIAVLRALGRERQANLLRHWLRTAHATTPTAAQLGELLDQIAAC ATRGHRIRIKVGRGFVVRQGDELGWYN >Mature_346_residues TLAFDTAMDRFRPALPLGVALSGGADSTALLHACAQRWPGQVHALHVHHGLQAAADGFETHCRALCGRLGVPLRIARVDA RHAGGESPEDAARQRRYEALRDLAGGQQGAHQAGTDGVMPEMEAGQGGPGGDGDPDRPAAGRPVLASVALAQHADDQVET VLLALSRGAGVAGLAAMPAFWRRGGIDWHRPLLDVAGADVRAWLTARGEGWVEDPTNADERYTRNRIRAGLLPALQAAFP QFRDTFARSASHAAEAAVLLRELAGADLQATGLPPRIAVLRALGRERQANLLRHWLRTAHATTPTAAQLGELLDQIAACA TRGHRIRIKVGRGFVVRQGDELGWYN
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=327, Percent_Identity=35.474006116208, Blast_Score=131, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012795 - InterPro: IPR015262 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3; PF09179 DUF1946 [H]
EC number: NA
Molecular weight: Translated: 36968; Mature: 36837
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAFDTAMDRFRPALPLGVALSGGADSTALLHACAQRWPGQVHALHVHHGLQAAADGFE CEECHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH THCRALCGRLGVPLRIARVDARHAGGESPEDAARQRRYEALRDLAGGQQGAHQAGTDGVM HHHHHHHHHCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PEMEAGQGGPGGDGDPDRPAAGRPVLASVALAQHADDQVETVLLALSRGAGVAGLAAMPA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH FWRRGGIDWHRPLLDVAGADVRAWLTARGEGWVEDPTNADERYTRNRIRAGLLPALQAAF HHHHCCCCHHHHHHHHCCCCCEEHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH PQFRDTFARSASHAAEAAVLLRELAGADLQATGLPPRIAVLRALGRERQANLLRHWLRTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH HATTPTAAQLGELLDQIAACATRGHRIRIKVGRGFVVRQGDELGWYN CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCC >Mature Secondary Structure TLAFDTAMDRFRPALPLGVALSGGADSTALLHACAQRWPGQVHALHVHHGLQAAADGFE EECHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH THCRALCGRLGVPLRIARVDARHAGGESPEDAARQRRYEALRDLAGGQQGAHQAGTDGVM HHHHHHHHHCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PEMEAGQGGPGGDGDPDRPAAGRPVLASVALAQHADDQVETVLLALSRGAGVAGLAAMPA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH FWRRGGIDWHRPLLDVAGADVRAWLTARGEGWVEDPTNADERYTRNRIRAGLLPALQAAF HHHHCCCCHHHHHHHHCCCCCEEHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH PQFRDTFARSASHAAEAAVLLRELAGADLQATGLPPRIAVLRALGRERQANLLRHWLRTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH HATTPTAAQLGELLDQIAACATRGHRIRIKVGRGFVVRQGDELGWYN CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA