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The map label for this gene is yaeJ [C]

Identifier: 120610977

GI number: 120610977

Start: 2531817

End: 2532263

Strand: Direct

Name: yaeJ [C]

Synonym: Aave_2304

Alternate gene names: 120610977

Gene position: 2531817-2532263 (Clockwise)

Preceding gene: 120610976

Following gene: 120610978

Centisome position: 47.3

GC content: 74.5

Gene sequence:

>447_bases
ATGGCGGACGGTACGCCCCGTATGCCCCCTGCGGCCGGCCGCGCGCCCCTGCGGGTGGACGAGCGCGAGATCGTCTTCAC
CGCCATGCGGGCCCAGGGTCCGGGCGGCCAGAACGTGAACAAGGTGTCGAGCGCCGTGCAACTGCGCTTCGACATCGCGG
CCTCGTCGCTGCCCGAGGACGTCAAGGCCCGGCTGCTGGCCCTGCCCGATGCCCGCATCACGCAGGCAGGCGTGGTGGTC
ATCAAGGCGCAGCAGTTCCGCACGCAGGAGGCCAACCGGCTGGATGCGCTGCAGCGGCTCGACGCCCTCGTGGCCCGTGC
CGCCCGGCCGCCGCGCGTGCGTCGGGCCACCCAGCCTTCCTACGGCGAGCGGCAGCGCCGCCTGCAGGACAAGCGCGAGC
GCTCCGGCACCAAGGCGCTGCGGGGCCGGGTGCGGGACACGGGCTGA

Upstream 100 bases:

>100_bases
GCCGGGCACTGGGTGCAGTTCGAGCGGCCGGGGCCCTTCGAGGAAGCGCTGCGCGCCGCGCTGCACGCCGGTGCCGCGGC
TGCCCGGGGCGCCTGACGCC

Downstream 100 bases:

>100_bases
GCCTTGTCCCGGCCGGGCTGCCTTCCTGCCCGGATTGGTGCGACAGCTGCAACGATGTGTTTGCCGCGCGGGCCTTGGGT
TCGTGGCTGCGCGCGCATAC

Product: class I peptide chain release factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MADGTPRMPPAAGRAPLRVDEREIVFTAMRAQGPGGQNVNKVSSAVQLRFDIAASSLPEDVKARLLALPDARITQAGVVV
IKAQQFRTQEANRLDALQRLDALVARAARPPRVRRATQPSYGERQRRLQDKRERSGTKALRGRVRDTG

Sequences:

>Translated_148_residues
MADGTPRMPPAAGRAPLRVDEREIVFTAMRAQGPGGQNVNKVSSAVQLRFDIAASSLPEDVKARLLALPDARITQAGVVV
IKAQQFRTQEANRLDALQRLDALVARAARPPRVRRATQPSYGERQRRLQDKRERSGTKALRGRVRDTG
>Mature_147_residues
ADGTPRMPPAAGRAPLRVDEREIVFTAMRAQGPGGQNVNKVSSAVQLRFDIAASSLPEDVKARLLALPDARITQAGVVVI
KAQQFRTQEANRLDALQRLDALVARAARPPRVRRATQPSYGERQRRLQDKRERSGTKALRGRVRDTG

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=124, Percent_Identity=51.6129032258064, Blast_Score=125, Evalue=9e-31,
Organism=Drosophila melanogaster, GI19921098, Length=153, Percent_Identity=36.6013071895425, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16304; Mature: 16173

Theoretical pI: Translated: 12.13; Mature: 12.13

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGTPRMPPAAGRAPLRVDEREIVFTAMRAQGPGGQNVNKVSSAVQLRFDIAASSLPED
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH
VKARLLALPDARITQAGVVVIKAQQFRTQEANRLDALQRLDALVARAARPPRVRRATQPS
HHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCC
YGERQRRLQDKRERSGTKALRGRVRDTG
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ADGTPRMPPAAGRAPLRVDEREIVFTAMRAQGPGGQNVNKVSSAVQLRFDIAASSLPED
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH
VKARLLALPDARITQAGVVVIKAQQFRTQEANRLDALQRLDALVARAARPPRVRRATQPS
HHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCC
YGERQRRLQDKRERSGTKALRGRVRDTG
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]