Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610967
Identifier: 120610967
GI number: 120610967
Start: 2523406
End: 2524269
Strand: Direct
Name: 120610967
Synonym: Aave_2293
Alternate gene names: NA
Gene position: 2523406-2524269 (Clockwise)
Preceding gene: 120610964
Following gene: 120610968
Centisome position: 47.14
GC content: 51.04
Gene sequence:
>864_bases ATGTGCACATCTCTAGCACATTTGTTGCAAATGAAATTCATCAGCGAAATAAATGAACCCATAGTCGTTGCGGTTGCCAG AGATAGATATCTATCCCCCATTCATCCATTTGCCGACGGCGTGCATCTGCCTTCCGTTCCCGCTCCTCGATATGGACAGG ATATTACCTATGGCTGTAGAGCGTCGGCGCCGCAGCGGCAGAGTGTCGGGGACACGGTAGACGTGCTGAAACCCAAGATG GAAAAATTGCTGGGAATTTTTGCCAGGGCAGATACCACCGGAGTGGCGCGAACATTATTTTCCGAATTTCTCAGAGAAAA TCGGAAGGGCGTTGAGTATTTTGAAGATCCACGTTTGACGGGGCTGGTCTCCAGTCATGCCAACATGGAGTATTTTTGCA GTGCAGCGCTGTCCGCTCCCAATTCCCCCTATAAGACCCCTGGCAGGATTCGTATTCACCAGGCACTCAAGGATGCTGAT TGGAACATCAGGAACCTGCAGGTGCCGATGGACCTGGGTGTGCCTGCATTTAATGCCGGTAGCCAATTTTTCGCAACCCA GGACTATGGCAACGGCCTCGGTCTGATGATCAACGGCGTCCAGCATGTCTATGTGATAGCCACTGCCTACGGGTATGATC GTGAGAGAGGTCAGTACCAAATAACATTGAAGTTTGTCTTGTACGACGTTGTTGGCCTGGATGATGATGACTTGAGAGAA TATGGCGCTCAATCCGATGGTGGTTTTTCTTTCGCTCAAAGTGTCGGTATCACGGCTTGGTGGCAACTCCAGCACCAATT CGCTTACCCTCCGCTGGTCACCCGGGTGGTATTGACCAGAAGCTACGAAGCGCCTGCAGTATGA
Upstream 100 bases:
>100_bases TTTGTAAATAAATTTTATGAATTAATTCATTGAATTTTTTATAATCATACTTTGATGCTTGATGGACTGGTTGAAAGCTG GGAAATAATATTTGTGAAGG
Downstream 100 bases:
>100_bases AAGAAATGATGCAACAACATTCTTGCGCCCGTTGGGGTTCACTCGGCTTGGCTTCCGTCATGCTAGGCTTGGCGATGATG CCGTTTTTCTATCTCGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MCTSLAHLLQMKFISEINEPIVVAVARDRYLSPIHPFADGVHLPSVPAPRYGQDITYGCRASAPQRQSVGDTVDVLKPKM EKLLGIFARADTTGVARTLFSEFLRENRKGVEYFEDPRLTGLVSSHANMEYFCSAALSAPNSPYKTPGRIRIHQALKDAD WNIRNLQVPMDLGVPAFNAGSQFFATQDYGNGLGLMINGVQHVYVIATAYGYDRERGQYQITLKFVLYDVVGLDDDDLRE YGAQSDGGFSFAQSVGITAWWQLQHQFAYPPLVTRVVLTRSYEAPAV
Sequences:
>Translated_287_residues MCTSLAHLLQMKFISEINEPIVVAVARDRYLSPIHPFADGVHLPSVPAPRYGQDITYGCRASAPQRQSVGDTVDVLKPKM EKLLGIFARADTTGVARTLFSEFLRENRKGVEYFEDPRLTGLVSSHANMEYFCSAALSAPNSPYKTPGRIRIHQALKDAD WNIRNLQVPMDLGVPAFNAGSQFFATQDYGNGLGLMINGVQHVYVIATAYGYDRERGQYQITLKFVLYDVVGLDDDDLRE YGAQSDGGFSFAQSVGITAWWQLQHQFAYPPLVTRVVLTRSYEAPAV >Mature_287_residues MCTSLAHLLQMKFISEINEPIVVAVARDRYLSPIHPFADGVHLPSVPAPRYGQDITYGCRASAPQRQSVGDTVDVLKPKM EKLLGIFARADTTGVARTLFSEFLRENRKGVEYFEDPRLTGLVSSHANMEYFCSAALSAPNSPYKTPGRIRIHQALKDAD WNIRNLQVPMDLGVPAFNAGSQFFATQDYGNGLGLMINGVQHVYVIATAYGYDRERGQYQITLKFVLYDVVGLDDDDLRE YGAQSDGGFSFAQSVGITAWWQLQHQFAYPPLVTRVVLTRSYEAPAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31948; Mature: 31948
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTSLAHLLQMKFISEINEPIVVAVARDRYLSPIHPFADGVHLPSVPAPRYGQDITYGCR CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASAPQRQSVGDTVDVLKPKMEKLLGIFARADTTGVARTLFSEFLRENRKGVEYFEDPRLT CCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCE GLVSSHANMEYFCSAALSAPNSPYKTPGRIRIHQALKDADWNIRNLQVPMDLGVPAFNAG EEHHCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHCCCCCEEEEEEEHHCCCCCCCCC SQFFATQDYGNGLGLMINGVQHVYVIATAYGYDRERGQYQITLKFVLYDVVGLDDDDLRE CCEEEECCCCCCCEEEEECCEEEEEEEEECCCCCCCCCEEEEEEEEEEHHHCCCHHHHHH YGAQSDGGFSFAQSVGITAWWQLQHQFAYPPLVTRVVLTRSYEAPAV HCCCCCCCHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MCTSLAHLLQMKFISEINEPIVVAVARDRYLSPIHPFADGVHLPSVPAPRYGQDITYGCR CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASAPQRQSVGDTVDVLKPKMEKLLGIFARADTTGVARTLFSEFLRENRKGVEYFEDPRLT CCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCE GLVSSHANMEYFCSAALSAPNSPYKTPGRIRIHQALKDADWNIRNLQVPMDLGVPAFNAG EEHHCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHCCCCCEEEEEEEHHCCCCCCCCC SQFFATQDYGNGLGLMINGVQHVYVIATAYGYDRERGQYQITLKFVLYDVVGLDDDDLRE CCEEEECCCCCCCEEEEECCEEEEEEEEECCCCCCCCCEEEEEEEEEEHHHCCCHHHHHH YGAQSDGGFSFAQSVGITAWWQLQHQFAYPPLVTRVVLTRSYEAPAV HCCCCCCCHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA