Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610968
Identifier: 120610968
GI number: 120610968
Start: 2524275
End: 2524781
Strand: Direct
Name: 120610968
Synonym: Aave_2294
Alternate gene names: NA
Gene position: 2524275-2524781 (Clockwise)
Preceding gene: 120610967
Following gene: 120610971
Centisome position: 47.16
GC content: 58.19
Gene sequence:
>507_bases ATGATGCAACAACATTCTTGCGCCCGTTGGGGTTCACTCGGCTTGGCTTCCGTCATGCTAGGCTTGGCGATGATGCCGTT TTTCTATCTCGGTATCGGTGCATGGCAGGAGTTGTCGACTGTCGCGAGTGCGACGGTTTTCCTGGCCGCCTTGGTTTGCC TTGGTTTCATTTGCCTGCGACTGCTGCCCCATGGAAATCCCACTTGGGCCGGAGCGCCCCGTCTGTGGTGGGTCGAGGCT GCCGCTTGGATCATATTGGTTTATCTGGGAGCCATGCTGACAGGCATGCGCCTGCAGACCGGGTTTGCACGGTTCGGGAG CTTCGCTCTGGTGTGGCTGGTGGCCAGCGCAGCGATGTTTCCGGTGGTGGGTTGTTTCTTCCGTAGGTCGGTTTTGGTGC GGCGTGCATCCGCTTGGCGTTTTTCCGCGCTCGCAACCGCAGTCTGGCTGTTGATCGCTTCCAACATCGCCACGGCATTC ATTTTCATGCCACAGAGGTTTGTCTGA
Upstream 100 bases:
>100_bases TCACGGCTTGGTGGCAACTCCAGCACCAATTCGCTTACCCTCCGCTGGTCACCCGGGTGGTATTGACCAGAAGCTACGAA GCGCCTGCAGTATGAAAGAA
Downstream 100 bases:
>100_bases CGAAGCCATCAGCTAGAGCGAGCGGCCTCGCCTCGGGAACACAGTGAGGGCAGGGCAGCTGCCCCGGCCGCTTCGTCAGG ATGAAGCCGCGCGCACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MMQQHSCARWGSLGLASVMLGLAMMPFFYLGIGAWQELSTVASATVFLAALVCLGFICLRLLPHGNPTWAGAPRLWWVEA AAWIILVYLGAMLTGMRLQTGFARFGSFALVWLVASAAMFPVVGCFFRRSVLVRRASAWRFSALATAVWLLIASNIATAF IFMPQRFV
Sequences:
>Translated_168_residues MMQQHSCARWGSLGLASVMLGLAMMPFFYLGIGAWQELSTVASATVFLAALVCLGFICLRLLPHGNPTWAGAPRLWWVEA AAWIILVYLGAMLTGMRLQTGFARFGSFALVWLVASAAMFPVVGCFFRRSVLVRRASAWRFSALATAVWLLIASNIATAF IFMPQRFV >Mature_168_residues MMQQHSCARWGSLGLASVMLGLAMMPFFYLGIGAWQELSTVASATVFLAALVCLGFICLRLLPHGNPTWAGAPRLWWVEA AAWIILVYLGAMLTGMRLQTGFARFGSFALVWLVASAAMFPVVGCFFRRSVLVRRASAWRFSALATAVWLLIASNIATAF IFMPQRFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18485; Mature: 18485
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQQHSCARWGSLGLASVMLGLAMMPFFYLGIGAWQELSTVASATVFLAALVCLGFICLR CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPHGNPTWAGAPRLWWVEAAAWIILVYLGAMLTGMRLQTGFARFGSFALVWLVASAAMF HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVVGCFFRRSVLVRRASAWRFSALATAVWLLIASNIATAFIFMPQRFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC >Mature Secondary Structure MMQQHSCARWGSLGLASVMLGLAMMPFFYLGIGAWQELSTVASATVFLAALVCLGFICLR CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPHGNPTWAGAPRLWWVEAAAWIILVYLGAMLTGMRLQTGFARFGSFALVWLVASAAMF HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVVGCFFRRSVLVRRASAWRFSALATAVWLLIASNIATAFIFMPQRFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA