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The map label for this gene is 120610949

Identifier: 120610949

GI number: 120610949

Start: 2505123

End: 2505575

Strand: Reverse

Name: 120610949

Synonym: Aave_2275

Alternate gene names: NA

Gene position: 2505575-2505123 (Counterclockwise)

Preceding gene: 120610951

Following gene: 120610948

Centisome position: 46.81

GC content: 73.07

Gene sequence:

>453_bases
ATGATTTCTCACGCATCTGCCGCGGCTTCCGCCACTGTCTCCCGTCCCGTGCTGTCGTTCGCCAACCCTCCGGGGCTCCA
TGATCCCGCCCCGAATGGCTATTCCCACCTGGCCGTCGTGCAGGGGCCGGTCCGCACCGTCCACGTGGCCGGCCAGGGCG
GGGAGGATGCCGCTGGCCGGCTGGCCGGAGGATTCGATGCCCAGGTACGCCAGGCGCTGGCCAATCTGTGCACGGCGCTG
GCCGCAGCGGGCGCCGCGCCGAGCGACGTCGCCCGCCTTACCGTGCTGGTGGTGGACCACTCCGAAGAGCGGCTGCGGTC
CTTCGGCGCCGCGCTGCGAGCGTGCTGGGGCGCGGCCGCCCTGCCGGCCTGCACGCTGATTCCGGTGCCGCGCCTCGCGC
TCGACGGCATGCTGTTCGAGATCGACGCCACGGCGGTGCTGCCGGCGGCGTGA

Upstream 100 bases:

>100_bases
TGGAAAAAGCAGTTGACCTCAAGTTTAGTTGAGGTTCCATACTGCAGGGCATGCGGTCGCCGCCCCACGGCGTCCACCCT
TCACGACCCGAGGATTTCCC

Downstream 100 bases:

>100_bases
GCCTCCCGGCCCCGACACCTCCCGCGGGCGGATGGCGCCACGGCGCCCCAGGCCCATTTCCCTTCCACAGACCGTTTCCT
TTGCCCATGCAATCCAGTTC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Ribonuclease; YjgF Family Translation Initiation Inhibitor; Endoribonuclease Family Protein; Translational Inhibitor Protein; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-PSP Superfamily; Exported Endoribonuclease Family Protein

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MISHASAAASATVSRPVLSFANPPGLHDPAPNGYSHLAVVQGPVRTVHVAGQGGEDAAGRLAGGFDAQVRQALANLCTAL
AAAGAAPSDVARLTVLVVDHSEERLRSFGAALRACWGAAALPACTLIPVPRLALDGMLFEIDATAVLPAA

Sequences:

>Translated_150_residues
MISHASAAASATVSRPVLSFANPPGLHDPAPNGYSHLAVVQGPVRTVHVAGQGGEDAAGRLAGGFDAQVRQALANLCTAL
AAAGAAPSDVARLTVLVVDHSEERLRSFGAALRACWGAAALPACTLIPVPRLALDGMLFEIDATAVLPAA
>Mature_150_residues
MISHASAAASATVSRPVLSFANPPGLHDPAPNGYSHLAVVQGPVRTVHVAGQGGEDAAGRLAGGFDAQVRQALANLCTAL
AAAGAAPSDVARLTVLVVDHSEERLRSFGAALRACWGAAALPACTLIPVPRLALDGMLFEIDATAVLPAA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15064; Mature: 15064

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISHASAAASATVSRPVLSFANPPGLHDPAPNGYSHLAVVQGPVRTVHVAGQGGEDAAGR
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCC
LAGGFDAQVRQALANLCTALAAAGAAPSDVARLTVLVVDHSEERLRSFGAALRACWGAAA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCHHH
LPACTLIPVPRLALDGMLFEIDATAVLPAA
CCHHHHCCCCHHHHCCEEEEECCCEECCCC
>Mature Secondary Structure
MISHASAAASATVSRPVLSFANPPGLHDPAPNGYSHLAVVQGPVRTVHVAGQGGEDAAGR
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCC
LAGGFDAQVRQALANLCTALAAAGAAPSDVARLTVLVVDHSEERLRSFGAALRACWGAAA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCHHH
LPACTLIPVPRLALDGMLFEIDATAVLPAA
CCHHHHCCCCHHHHCCEEEEECCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA