Click here to switch to the map view.

The map label for this gene is srpB [H]

Identifier: 120610951

GI number: 120610951

Start: 2506317

End: 2506934

Strand: Reverse

Name: srpB [H]

Synonym: Aave_2277

Alternate gene names: 120610951

Gene position: 2506934-2506317 (Counterclockwise)

Preceding gene: 120610952

Following gene: 120610949

Centisome position: 46.83

GC content: 75.89

Gene sequence:

>618_bases
ATGACGGAGTGGTGGGAGGTGATCCTGGCCACGGCGGCCGGCGAATTCTCCGACCTGCCCGACCTGGAGCAGGCCACGCG
CATCGTGGTGCGCCTGGGCATGGCCGGGCTGCTGGGCGGGCTGCTGGGCTGGGAGCGCGAGCACCGTGGCAAGGCCGCCG
GGGTGCGCACGCACATGCTGGTGTCGATGGGCGCGGCGCTGTTCGTGCTGGTGGCCGAGCAGGAAGGCATCGCGCCCGCG
GACAACAGCCGCGTGCTGCAGGGCATCATCGCGGGCGTGGGCTTTCTGGGCGCGGGCACCATCCTCAAGAGCGACGGCGC
GCACCAGATCCGGGGGCTCACCACCGCCGCCGGCATCTGGCTCACCGCGGCGATCGGCGTGGCGGCGGGGCTGGGCCGCG
AGGCGACCGCGCTGCTGAGCACGCTGCTGGCCCTGCTGGTGCTGGCCGCGGAGCCGATCGCGCAGCGGCTGCTGTACGGG
CGCAGCGCCCCCGCGAAGGACGACGCGGCGGCAGCCGGGGAACGCCGGGCCGCGGCAGGGGCGCGATCGCCCTCGTCGGC
GCAGGACCATGGCAGCGAGACCGGCTCCACGGGCGGCGGGCCGCCCGCCGCGTCCTGA

Upstream 100 bases:

>100_bases
CCGAAGACTTGATTCCCGCCATGCACAGCACCGCATCCCGCCGCCCTGACAGCAGGAGACTCCAGGCACCTTCCGGCCCA
TGCCGGTGCGGAGGCGCCGC

Downstream 100 bases:

>100_bases
AGTTTTCCAGGCCCCGCCTTTCGCAGGCCCGGCAGCGCGGACAGCCGGGGCCGCGGAGGGTCAGCGTGTCCGCCGGCGCG
CGGCCGGGTCGGGGGAGAAA

Product: MgtC/SapB transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTEWWEVILATAAGEFSDLPDLEQATRIVVRLGMAGLLGGLLGWEREHRGKAAGVRTHMLVSMGAALFVLVAEQEGIAPA
DNSRVLQGIIAGVGFLGAGTILKSDGAHQIRGLTTAAGIWLTAAIGVAAGLGREATALLSTLLALLVLAAEPIAQRLLYG
RSAPAKDDAAAAGERRAAAGARSPSSAQDHGSETGSTGGGPPAAS

Sequences:

>Translated_205_residues
MTEWWEVILATAAGEFSDLPDLEQATRIVVRLGMAGLLGGLLGWEREHRGKAAGVRTHMLVSMGAALFVLVAEQEGIAPA
DNSRVLQGIIAGVGFLGAGTILKSDGAHQIRGLTTAAGIWLTAAIGVAAGLGREATALLSTLLALLVLAAEPIAQRLLYG
RSAPAKDDAAAAGERRAAAGARSPSSAQDHGSETGSTGGGPPAAS
>Mature_204_residues
TEWWEVILATAAGEFSDLPDLEQATRIVVRLGMAGLLGGLLGWEREHRGKAAGVRTHMLVSMGAALFVLVAEQEGIAPAD
NSRVLQGIIAGVGFLGAGTILKSDGAHQIRGLTTAAGIWLTAAIGVAAGLGREATALLSTLLALLVLAAEPIAQRLLYGR
SAPAKDDAAAAGERRAAAGARSPSSAQDHGSETGSTGGGPPAAS

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=129, Percent_Identity=43.4108527131783, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 20694; Mature: 20563

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEWWEVILATAAGEFSDLPDLEQATRIVVRLGMAGLLGGLLGWEREHRGKAAGVRTHML
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHH
VSMGAALFVLVAEQEGIAPADNSRVLQGIIAGVGFLGAGTILKSDGAHQIRGLTTAAGIW
HHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHH
LTAAIGVAAGLGREATALLSTLLALLVLAAEPIAQRLLYGRSAPAKDDAAAAGERRAAAG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHCC
ARSPSSAQDHGSETGSTGGGPPAAS
CCCCCCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEWWEVILATAAGEFSDLPDLEQATRIVVRLGMAGLLGGLLGWEREHRGKAAGVRTHML
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHH
VSMGAALFVLVAEQEGIAPADNSRVLQGIIAGVGFLGAGTILKSDGAHQIRGLTTAAGIW
HHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHH
LTAAIGVAAGLGREATALLSTLLALLVLAAEPIAQRLLYGRSAPAKDDAAAAGERRAAAG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHCC
ARSPSSAQDHGSETGSTGGGPPAAS
CCCCCCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]