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The map label for this gene is dgoA [H]

Identifier: 120610919

GI number: 120610919

Start: 2468613

End: 2469332

Strand: Reverse

Name: dgoA [H]

Synonym: Aave_2245

Alternate gene names: 120610919

Gene position: 2469332-2468613 (Counterclockwise)

Preceding gene: 120610920

Following gene: 120610918

Centisome position: 46.13

GC content: 75.28

Gene sequence:

>720_bases
ATGACCACCATCGACCACGCCCTGTTCCACGCCCTGCAGCGCTGCGGCCTCATCGCCATCCTGCGCGGCATCCAGCCCCA
TGAGGCCGCACCTGTCGGCCAGGCCCTGTACGACGCGGGCTTGCGCATCATCGAGGTGCCGCTCAATTCCCCCGAGCCGC
TGGCCAGCATCCGCGCCCTGCGGGACGCCCTGCCCGCCGACTGCGTGGTCGGCGCAGGCACGGTGCTCTCCGCACAGGAC
TGCGCCGACGTGGCCGGGGCCGGCGGGCAGATCATCGTCATGCCGCACAGCGACCCGGCCGTGATCCGCGCCGCGCGCGC
GGCCGGCCTGGCCTGCGCGCCCGGCGTGGCGACGCTGACCGAGGCCTATGCCGCGCTGGCCGCCGGCGCCAACCTGCTCA
AGCTCTTCCCGGCGGAAGCGCTTCCGCCCGCCGTGCTCAAGGCCTGGCGCGCGGTGATCCCGCACAGCGTGGCGCTGGCG
CCCGTCGGCGGCATTGCGCCGGAAAGCATCGCGCCCTATGCGGCGGCGGGGGCCAGCGGCTTCGGCCTGGGCTCGGCCCT
CTACCGCCCCGGCAACAGCGCGGCCGACGTGGCCCGCAAGGCCGTCGCCTTCATCCAGGCCTGGCACGACGCCTACGGCA
TGGCCCGCACCTGCGGACAGGGCGCCGCGCCGGCCGCCGCGGCCACCCGTTCCTCTCCCGACGCAGCCACCGTTTCCTGA

Upstream 100 bases:

>100_bases
CCGCCCAGGCCACCCCCACCGGTCTCTGGCAGATCGCCCGGGCCGCCGGCCTGCCGGCCCCGGACGCGCCGCAACCTTCA
TCCGCAGAAAGCCTTGCAGC

Downstream 100 bases:

>100_bases
GATTCCCCCCCCTCCCATGAAGATCACCCGATTGACCACGTTCCTGGTGCCGCCGCGCTGGTGCTTCCTGAAGATCGAAA
CCGACGAAGGCATCGACGGC

Product: 2-keto-3-deoxy-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTTIDHALFHALQRCGLIAILRGIQPHEAAPVGQALYDAGLRIIEVPLNSPEPLASIRALRDALPADCVVGAGTVLSAQD
CADVAGAGGQIIVMPHSDPAVIRAARAAGLACAPGVATLTEAYAALAAGANLLKLFPAEALPPAVLKAWRAVIPHSVALA
PVGGIAPESIAPYAAAGASGFGLGSALYRPGNSAADVARKAVAFIQAWHDAYGMARTCGQGAAPAAAATRSSPDAATVS

Sequences:

>Translated_239_residues
MTTIDHALFHALQRCGLIAILRGIQPHEAAPVGQALYDAGLRIIEVPLNSPEPLASIRALRDALPADCVVGAGTVLSAQD
CADVAGAGGQIIVMPHSDPAVIRAARAAGLACAPGVATLTEAYAALAAGANLLKLFPAEALPPAVLKAWRAVIPHSVALA
PVGGIAPESIAPYAAAGASGFGLGSALYRPGNSAADVARKAVAFIQAWHDAYGMARTCGQGAAPAAAATRSSPDAATVS
>Mature_238_residues
TTIDHALFHALQRCGLIAILRGIQPHEAAPVGQALYDAGLRIIEVPLNSPEPLASIRALRDALPADCVVGAGTVLSAQDC
ADVAGAGGQIIVMPHSDPAVIRAARAAGLACAPGVATLTEAYAALAAGANLLKLFPAEALPPAVLKAWRAVIPHSVALAP
VGGIAPESIAPYAAAGASGFGLGSALYRPGNSAADVARKAVAFIQAWHDAYGMARTCGQGAAPAAAATRSSPDAATVS

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=195, Percent_Identity=46.6666666666667, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1788156, Length=151, Percent_Identity=35.0993377483444, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 23830; Mature: 23698

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIDHALFHALQRCGLIAILRGIQPHEAAPVGQALYDAGLRIIEVPLNSPEPLASIRAL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
RDALPADCVVGAGTVLSAQDCADVAGAGGQIIVMPHSDPAVIRAARAAGLACAPGVATLT
HHCCCCHHHHCCCCEECHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHH
EAYAALAAGANLLKLFPAEALPPAVLKAWRAVIPHSVALAPVGGIAPESIAPYAAAGASG
HHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHCCCCC
FGLGSALYRPGNSAADVARKAVAFIQAWHDAYGMARTCGQGAAPAAAATRSSPDAATVS
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TTIDHALFHALQRCGLIAILRGIQPHEAAPVGQALYDAGLRIIEVPLNSPEPLASIRAL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
RDALPADCVVGAGTVLSAQDCADVAGAGGQIIVMPHSDPAVIRAARAAGLACAPGVATLT
HHCCCCHHHHCCCCEECHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHH
EAYAALAAGANLLKLFPAEALPPAVLKAWRAVIPHSVALAPVGGIAPESIAPYAAAGASG
HHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHCCCCC
FGLGSALYRPGNSAADVARKAVAFIQAWHDAYGMARTCGQGAAPAAAATRSSPDAATVS
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]