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The map label for this gene is yccS [H]

Identifier: 120610917

GI number: 120610917

Start: 2465107

End: 2467413

Strand: Direct

Name: yccS [H]

Synonym: Aave_2243

Alternate gene names: 120610917

Gene position: 2465107-2467413 (Clockwise)

Preceding gene: 120610915

Following gene: 120610931

Centisome position: 46.05

GC content: 75.73

Gene sequence:

>2307_bases
ATGAGGTTTCATTCGAATCACCGCCTGCGGGCGGCCGTGCGCGTGGCCCTGAGCCACTATGTGGCCAACGGGGTGTCCGC
GGCGCTGGGCCTGCTGCTCATCTCCGTGGCCGTGCATGTCTGGCTGGGGCCCGCGGCGGCGGCGGCCGCGTCGGTGGGCG
TGATCGTCTGCTCGCCGCCGGACCTGCCCGGCCCGCGGCGCGGCAAGCTCTGGCAGATGCTGCCCGCACCGCTGCTGGGC
ATTCCCCTGTTCTTCGGGGTGCAGTGGCTGCAGGGCGATCCGCTGCACCTGGGCCTGCTGCTGGTGCCCGGCACGTTCCT
GGCCTTCCTCGCCATGGCCTGGGGCCGGCGCGGCATCCCGATCGCGGTGGCGGTGATGTTCTCCATGGTGTTTTCGATGG
CCGCGGCCCCGCGCGTGCCGCCCGGGGGCGACCCGTTGCCCGCCGCGCTGGCGGTCACCGCGCATTTCGCGCTGGGCGCG
GGGCTGTACGTGCTCTACGCGGTGGTGGCGAACCGCCTGCTCAACGCGCGCTACCGGGTGCAGCTCGTGGCGGACACGCT
GTATTCGCTGGCGGCGCTCATGCGCGTGCAGGCGCGGCTGTTCGACAGCGCGCCGGCCGGCGTCGGCGCGTCGCCGGATG
CCGCCGCGCGCGCGCAGGACGCGGAGCGCGGCGCCCAGGGGCAGGGCGCCGCCGGGGCGCGGGACGGCTCGGCGGAGGCA
CCCCATGCCCTGACCGGACTGCTGCTGCGCCGGCAGGCGGCGCTGGCGGAGCAATTGCAGGGCGCGCGCAACATCGTGCT
GGAGTCCCCCTCCACGCCGGCCCGCCAGCGGCTGGCGGCCATGCTGGTGCAGGTGCTGGAGACGCGCGACCACCTGCTGG
CCTGCGAACTGGACGTGGAGGCGCTCAAGGCGCACCCGGGCCACGTGCCGGTGCTGCATGCGCTGCGCGGCGTGCTGCTC
GATACGGCCGCGGAATTCGCCCGGCTCGCGGACGCGCTGCTGCGCGGCAGCCGGCCCGCGCCCTTCGCCGATGCGCGGCC
CGCGCTGGCGGAGCTGCGCTGGAGCGATCCGCTGCCGCCCGCACCGGCGGCGGCGGGCCCTTCGCCGCACGCGCTGGCCC
GGGGGCTGGCGGACCGGGTCGGGCACATCAACGACGAGGCGCTGCGGATGAATGCGCTCGCACGCGGCGAGGCCCCGCCG
GACCTGGCTGTGGTGCGGGCCAGCTGGCAGATGTTCGTCAGCCCCACGGCCTGGTCCTGGGCGCCGCTGGCCACGCTCTG
GCGCTGGGATGCGCCGCCGCTGCGGCATGCGGTGCGCGCCGCGCTGGCCATCGCCGCGGGCTTCCTGGTGGCGCAGGCGC
TGCCCTGGGGCACGCACGCCTACTGGATCCTGCTCACCATCGTGGTGGTGCTGCGCGGCAGCCTGGCGCAGACGCTGGAG
CGCCGCAACAGCCGCGTGGCAGGCACGCTGCTGGGCTGCGTGCTGGCGGCGGCCCTGCTGGCGGCGCACCTGTCGTCGTG
GCAGCTGGTGCTGTGCCTGACGGTGGCGCAGGCCATGGCCCATGCCTTCGCGGTGCGGCGCTACCTGGTCACCGCGGTGG
CGGCGACGGTGCTGGGCCTGGTGCAGTCGCACATGCTGCACGGCGGGGCGATCAGCCCGGCCTTCGACCTGCTGGAGCGG
CTGGCCGACACGCTGATCGGCACCGGCATCGCCTGGGCGTTCTCGTATGTGCTGCCCTCCTGGGAGCGCTCGCAGATTCC
GGCGCTGGTGCAGCGCACGCTGGTGGCGCAGGCGCGGCACGCGCGCGAGGCGCTGGCGCTGGGCCAGCTGCGCGCGGTGG
ACAATGCCCCCGAACTGGCCTGGCGGCTGGCGCGGCGCGAGGCCTACGACAGCCTGTCGGCCCTCGTGCAGGCCACCGAG
CGGGCCATGGCCGAGCCCCGTGCCGTGCAGCCGCCCGTGGTGGCACTGGAGCATTTGCAGGCGCGCTGCTACCAGCTGCT
GGCGCAGCTCACCGCGATCAAGACCATGCTGCTGCTGCGGCGCGGGCGCCTGGATGCCGGGGCGCTGCAGGCGTGCCTCG
CGCAGACGGCCGAGGCGATCTCGCGCCGGCTGGAAGGACTGGAGGACGCTGCCGCCACGGCGGCGGATGCCGCGCGGCCC
TCGCTCCCCGGCGAGGCGCAGTCCTGGCCCGATCCGCACGACGGCGACCTCGGCCCCTGGATGGTGCGCCGCCTGGCGCT
GGCCACCGAACGGGCCGGGCAGGTGCGCGCCGCGGCGCGCGAGGCCGTGGCGACCGGCGGATCCTAG

Upstream 100 bases:

>100_bases
CTGGAAGGGAGGGGCTGCAGCCCGGCCGTGCGCATGCTACACGCGGCGGATGCCCCCGGGGCGGCCGGGGGGCGCACCGC
TGCAGTACCCTCGGCAGGGT

Downstream 100 bases:

>100_bases
CGCCGGCGGGGGCGCAGGCCGCCCGTGGCGGGCATCACCATTCCGCGAGGCTGCCGTCCCGGTGGCGCCACACCGGGTTG
CGCCAGCGGTGGCCCTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 768; Mature: 768

Protein sequence:

>768_residues
MRFHSNHRLRAAVRVALSHYVANGVSAALGLLLISVAVHVWLGPAAAAAASVGVIVCSPPDLPGPRRGKLWQMLPAPLLG
IPLFFGVQWLQGDPLHLGLLLVPGTFLAFLAMAWGRRGIPIAVAVMFSMVFSMAAAPRVPPGGDPLPAALAVTAHFALGA
GLYVLYAVVANRLLNARYRVQLVADTLYSLAALMRVQARLFDSAPAGVGASPDAAARAQDAERGAQGQGAAGARDGSAEA
PHALTGLLLRRQAALAEQLQGARNIVLESPSTPARQRLAAMLVQVLETRDHLLACELDVEALKAHPGHVPVLHALRGVLL
DTAAEFARLADALLRGSRPAPFADARPALAELRWSDPLPPAPAAAGPSPHALARGLADRVGHINDEALRMNALARGEAPP
DLAVVRASWQMFVSPTAWSWAPLATLWRWDAPPLRHAVRAALAIAAGFLVAQALPWGTHAYWILLTIVVVLRGSLAQTLE
RRNSRVAGTLLGCVLAAALLAAHLSSWQLVLCLTVAQAMAHAFAVRRYLVTAVAATVLGLVQSHMLHGGAISPAFDLLER
LADTLIGTGIAWAFSYVLPSWERSQIPALVQRTLVAQARHAREALALGQLRAVDNAPELAWRLARREAYDSLSALVQATE
RAMAEPRAVQPPVVALEHLQARCYQLLAQLTAIKTMLLLRRGRLDAGALQACLAQTAEAISRRLEGLEDAAATAADAARP
SLPGEAQSWPDPHDGDLGPWMVRRLALATERAGQVRAAAREAVATGGS

Sequences:

>Translated_768_residues
MRFHSNHRLRAAVRVALSHYVANGVSAALGLLLISVAVHVWLGPAAAAAASVGVIVCSPPDLPGPRRGKLWQMLPAPLLG
IPLFFGVQWLQGDPLHLGLLLVPGTFLAFLAMAWGRRGIPIAVAVMFSMVFSMAAAPRVPPGGDPLPAALAVTAHFALGA
GLYVLYAVVANRLLNARYRVQLVADTLYSLAALMRVQARLFDSAPAGVGASPDAAARAQDAERGAQGQGAAGARDGSAEA
PHALTGLLLRRQAALAEQLQGARNIVLESPSTPARQRLAAMLVQVLETRDHLLACELDVEALKAHPGHVPVLHALRGVLL
DTAAEFARLADALLRGSRPAPFADARPALAELRWSDPLPPAPAAAGPSPHALARGLADRVGHINDEALRMNALARGEAPP
DLAVVRASWQMFVSPTAWSWAPLATLWRWDAPPLRHAVRAALAIAAGFLVAQALPWGTHAYWILLTIVVVLRGSLAQTLE
RRNSRVAGTLLGCVLAAALLAAHLSSWQLVLCLTVAQAMAHAFAVRRYLVTAVAATVLGLVQSHMLHGGAISPAFDLLER
LADTLIGTGIAWAFSYVLPSWERSQIPALVQRTLVAQARHAREALALGQLRAVDNAPELAWRLARREAYDSLSALVQATE
RAMAEPRAVQPPVVALEHLQARCYQLLAQLTAIKTMLLLRRGRLDAGALQACLAQTAEAISRRLEGLEDAAATAADAARP
SLPGEAQSWPDPHDGDLGPWMVRRLALATERAGQVRAAAREAVATGGS
>Mature_768_residues
MRFHSNHRLRAAVRVALSHYVANGVSAALGLLLISVAVHVWLGPAAAAAASVGVIVCSPPDLPGPRRGKLWQMLPAPLLG
IPLFFGVQWLQGDPLHLGLLLVPGTFLAFLAMAWGRRGIPIAVAVMFSMVFSMAAAPRVPPGGDPLPAALAVTAHFALGA
GLYVLYAVVANRLLNARYRVQLVADTLYSLAALMRVQARLFDSAPAGVGASPDAAARAQDAERGAQGQGAAGARDGSAEA
PHALTGLLLRRQAALAEQLQGARNIVLESPSTPARQRLAAMLVQVLETRDHLLACELDVEALKAHPGHVPVLHALRGVLL
DTAAEFARLADALLRGSRPAPFADARPALAELRWSDPLPPAPAAAGPSPHALARGLADRVGHINDEALRMNALARGEAPP
DLAVVRASWQMFVSPTAWSWAPLATLWRWDAPPLRHAVRAALAIAAGFLVAQALPWGTHAYWILLTIVVVLRGSLAQTLE
RRNSRVAGTLLGCVLAAALLAAHLSSWQLVLCLTVAQAMAHAFAVRRYLVTAVAATVLGLVQSHMLHGGAISPAFDLLER
LADTLIGTGIAWAFSYVLPSWERSQIPALVQRTLVAQARHAREALALGQLRAVDNAPELAWRLARREAYDSLSALVQATE
RAMAEPRAVQPPVVALEHLQARCYQLLAQLTAIKTMLLLRRGRLDAGALQACLAQTAEAISRRLEGLEDAAATAADAARP
SLPGEAQSWPDPHDGDLGPWMVRRLALATERAGQVRAAAREAVATGGS

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=237, Percent_Identity=30.379746835443, Blast_Score=81, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81313; Mature: 81313

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFHSNHRLRAAVRVALSHYVANGVSAALGLLLISVAVHVWLGPAAAAAASVGVIVCSPP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCEEEECCC
DLPGPRRGKLWQMLPAPLLGIPLFFGVQWLQGDPLHLGLLLVPGTFLAFLAMAWGRRGIP
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCH
IAVAVMFSMVFSMAAAPRVPPGGDPLPAALAVTAHFALGAGLYVLYAVVANRLLNARYRV
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLVADTLYSLAALMRVQARLFDSAPAGVGASPDAAARAQDAERGAQGQGAAGARDGSAEA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PHALTGLLLRRQAALAEQLQGARNIVLESPSTPARQRLAAMLVQVLETRDHLLACELDVE
CHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHH
ALKAHPGHVPVLHALRGVLLDTAAEFARLADALLRGSRPAPFADARPALAELRWSDPLPP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCC
APAAAGPSPHALARGLADRVGHINDEALRMNALARGEAPPDLAVVRASWQMFVSPTAWSW
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCH
APLATLWRWDAPPLRHAVRAALAIAAGFLVAQALPWGTHAYWILLTIVVVLRGSLAQTLE
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRNSRVAGTLLGCVLAAALLAAHLSSWQLVLCLTVAQAMAHAFAVRRYLVTAVAATVLGL
HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSHMLHGGAISPAFDLLERLADTLIGTGIAWAFSYVLPSWERSQIPALVQRTLVAQARH
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AREALALGQLRAVDNAPELAWRLARREAYDSLSALVQATERAMAEPRAVQPPVVALEHLQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ARCYQLLAQLTAIKTMLLLRRGRLDAGALQACLAQTAEAISRRLEGLEDAAATAADAARP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLPGEAQSWPDPHDGDLGPWMVRRLALATERAGQVRAAAREAVATGGS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRFHSNHRLRAAVRVALSHYVANGVSAALGLLLISVAVHVWLGPAAAAAASVGVIVCSPP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCEEEECCC
DLPGPRRGKLWQMLPAPLLGIPLFFGVQWLQGDPLHLGLLLVPGTFLAFLAMAWGRRGIP
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCH
IAVAVMFSMVFSMAAAPRVPPGGDPLPAALAVTAHFALGAGLYVLYAVVANRLLNARYRV
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLVADTLYSLAALMRVQARLFDSAPAGVGASPDAAARAQDAERGAQGQGAAGARDGSAEA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PHALTGLLLRRQAALAEQLQGARNIVLESPSTPARQRLAAMLVQVLETRDHLLACELDVE
CHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHH
ALKAHPGHVPVLHALRGVLLDTAAEFARLADALLRGSRPAPFADARPALAELRWSDPLPP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCC
APAAAGPSPHALARGLADRVGHINDEALRMNALARGEAPPDLAVVRASWQMFVSPTAWSW
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCH
APLATLWRWDAPPLRHAVRAALAIAAGFLVAQALPWGTHAYWILLTIVVVLRGSLAQTLE
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRNSRVAGTLLGCVLAAALLAAHLSSWQLVLCLTVAQAMAHAFAVRRYLVTAVAATVLGL
HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSHMLHGGAISPAFDLLERLADTLIGTGIAWAFSYVLPSWERSQIPALVQRTLVAQARH
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AREALALGQLRAVDNAPELAWRLARREAYDSLSALVQATERAMAEPRAVQPPVVALEHLQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ARCYQLLAQLTAIKTMLLLRRGRLDAGALQACLAQTAEAISRRLEGLEDAAATAADAARP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLPGEAQSWPDPHDGDLGPWMVRRLALATERAGQVRAAAREAVATGGS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]