The gene/protein map for NC_008752 is currently unavailable.
Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is yegQ [C]

Identifier: 120610888

GI number: 120610888

Start: 2434707

End: 2436110

Strand: Reverse

Name: yegQ [C]

Synonym: Aave_2214

Alternate gene names: 120610888

Gene position: 2436110-2434707 (Counterclockwise)

Preceding gene: 120610889

Following gene: 120610886

Centisome position: 45.51

GC content: 70.3

Gene sequence:

>1404_bases
ATGACGCTCCGCCCGCCCGAACTGCTGCTGCCCGCCGGCTCCCTCGACAGGATGCGCACGGCCTACGATTTCGGCGCCGA
CGCCGTCTATGCGGGCCAGCCGCGCTATTCCCTGCGGGCACGCAACAACGAATTCCGGCTCGAACAGATCGGCCAGGGCA
TCCGCGAGGCGCATGCGCGCGGCCGCAAGTTCTTCGTGACCAGCAACCTGCTGCCGCACGACGACAAGGTGCGCACCTAC
CTGCGCGACATCGAGCCGGTGATCGCCCTGGGGCCCGACGCGCTCATCATGGCCGACCCGGGCCTCATCATGCTGGTGCG
CGAGCGCTGGCCCGACATGCCCATCCACCTGTCGGTACAGGCCAACACGGTGAACGCGATGGCCGTGAAGTTCTGGCAGC
GCATGGGCCTGGCGCGCATCATCCTCTCACGCGAACTGAGCCTGGACGAGATCGAGGGCATACGACAGCAGTGCCCGGAG
ATCGAGCTGGAAGTGTTCGTGCATGGCGCACTGTGCATCGCCTACTCCGGCCGCTGCCTGCTATCGGGCTATTTCAACCG
GCGCGATGCCAACCAGGGCACCTGCACCAATGCCTGCCGCTGGAGCTATGCGGCATCGCCGGGCACGGACGCCACCGACA
GCGGCGAGGTCCGGCCGCTGCCGCTGGACGGCGGCTTCGATCCGCAGGCGGAGCAGGCCCGGGCCGACGGCGCCTTCGCG
GCCTGCGGCGGCGCGCCCCGCCATCCGCTGGCCGACCACGCCTACCTGCTGGAAGAAAAGGAACGCCCCGGCGAGCTGAT
GCCGGTGATGGAAGACGAACACGGCACCTACATCCTCAACAGCCGCGACCTGCGCGCCGTGGAGCACGTGCACCGGCTCG
TGGCCATGGGCGTGGATTCCCTCAAGATCGAAGGCCGCACCAAGAGCCGCTACTACGTGGCGCGCACCGCCCAGGTGTAC
CGCCGCGCCATCGACGATGCGGTGGCGGGCCGGGATTTCGATCCCGCCCTGCTGGTGGAACTCGACGGGCTGGCCCACCG
CGGCTACACGGCCGGCTTCCTGCAGCGCCATCCGGCGCAGGACCTGCAGAACTATGGCACGGGCAGTTCGCAGCCCGTGC
GCAGCCTGTTCGTGGGCGAGGTGGTGGCCTGCGGCGGAGGCTGGGCCGAGGTGGAGACCAGGAACCGCTTCGCGGTCGGC
GACCGGCTGGAAATCATCCACCCCGCGGGCAACCGCACGGTCCGCCTGGAACGCATGCGGGCGGCCGCGAGCGGCGAGCC
CCTGCACGTGGCGGCGGGCAGTCCGCTGCGCGTGCGCATTCCGCTGGAAGGCCCGGCGGAAGGCGCGATGCTCGCGCGCA
TCCTCGATCCGGCCACCGCGGAGCCCGCGCAGGCACGGCCCTGA

Upstream 100 bases:

>100_bases
GCGGGGCCGGAGGCTGAGGACAAAAGCCTGCGCCAGGTCAAGGAGCGCGCCGCGGCCGGGCGCCACAATCGCGCGCTCCA
CCGCGCCCTGCCCTGCTCCC

Downstream 100 bases:

>100_bases
CGGCGCGCGCAGGCAGCGTCAGGCCGTGCGCGGCTGCCCCGCCGCGAAGCCGGCCGGGTCCTGGTGGCGCAGCCCCATCC
ACTGCAGCTCCCCCAGCACC

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MTLRPPELLLPAGSLDRMRTAYDFGADAVYAGQPRYSLRARNNEFRLEQIGQGIREAHARGRKFFVTSNLLPHDDKVRTY
LRDIEPVIALGPDALIMADPGLIMLVRERWPDMPIHLSVQANTVNAMAVKFWQRMGLARIILSRELSLDEIEGIRQQCPE
IELEVFVHGALCIAYSGRCLLSGYFNRRDANQGTCTNACRWSYAASPGTDATDSGEVRPLPLDGGFDPQAEQARADGAFA
ACGGAPRHPLADHAYLLEEKERPGELMPVMEDEHGTYILNSRDLRAVEHVHRLVAMGVDSLKIEGRTKSRYYVARTAQVY
RRAIDDAVAGRDFDPALLVELDGLAHRGYTAGFLQRHPAQDLQNYGTGSSQPVRSLFVGEVVACGGGWAEVETRNRFAVG
DRLEIIHPAGNRTVRLERMRAAASGEPLHVAAGSPLRVRIPLEGPAEGAMLARILDPATAEPAQARP

Sequences:

>Translated_467_residues
MTLRPPELLLPAGSLDRMRTAYDFGADAVYAGQPRYSLRARNNEFRLEQIGQGIREAHARGRKFFVTSNLLPHDDKVRTY
LRDIEPVIALGPDALIMADPGLIMLVRERWPDMPIHLSVQANTVNAMAVKFWQRMGLARIILSRELSLDEIEGIRQQCPE
IELEVFVHGALCIAYSGRCLLSGYFNRRDANQGTCTNACRWSYAASPGTDATDSGEVRPLPLDGGFDPQAEQARADGAFA
ACGGAPRHPLADHAYLLEEKERPGELMPVMEDEHGTYILNSRDLRAVEHVHRLVAMGVDSLKIEGRTKSRYYVARTAQVY
RRAIDDAVAGRDFDPALLVELDGLAHRGYTAGFLQRHPAQDLQNYGTGSSQPVRSLFVGEVVACGGGWAEVETRNRFAVG
DRLEIIHPAGNRTVRLERMRAAASGEPLHVAAGSPLRVRIPLEGPAEGAMLARILDPATAEPAQARP
>Mature_466_residues
TLRPPELLLPAGSLDRMRTAYDFGADAVYAGQPRYSLRARNNEFRLEQIGQGIREAHARGRKFFVTSNLLPHDDKVRTYL
RDIEPVIALGPDALIMADPGLIMLVRERWPDMPIHLSVQANTVNAMAVKFWQRMGLARIILSRELSLDEIEGIRQQCPEI
ELEVFVHGALCIAYSGRCLLSGYFNRRDANQGTCTNACRWSYAASPGTDATDSGEVRPLPLDGGFDPQAEQARADGAFAA
CGGAPRHPLADHAYLLEEKERPGELMPVMEDEHGTYILNSRDLRAVEHVHRLVAMGVDSLKIEGRTKSRYYVARTAQVYR
RAIDDAVAGRDFDPALLVELDGLAHRGYTAGFLQRHPAQDLQNYGTGSSQPVRSLFVGEVVACGGGWAEVETRNRFAVGD
RLEIIHPAGNRTVRLERMRAAASGEPLHVAAGSPLRVRIPLEGPAEGAMLARILDPATAEPAQARP

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=442, Percent_Identity=58.1447963800905, Blast_Score=492, Evalue=1e-140,
Organism=Escherichia coli, GI1789548, Length=337, Percent_Identity=31.7507418397626, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI87081910, Length=198, Percent_Identity=39.8989898989899, Blast_Score=132, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 51441; Mature: 51310

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRPPELLLPAGSLDRMRTAYDFGADAVYAGQPRYSLRARNNEFRLEQIGQGIREAHAR
CCCCCCCCEECCCCHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHC
GRKFFVTSNLLPHDDKVRTYLRDIEPVIALGPDALIMADPGLIMLVRERWPDMPIHLSVQ
CCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCEEEEECCCEEEEEHHHCCCCCEEEEEE
ANTVNAMAVKFWQRMGLARIILSRELSLDEIEGIRQQCPEIELEVFVHGALCIAYSGRCL
CCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEE
LSGYFNRRDANQGTCTNACRWSYAASPGTDATDSGEVRPLPLDGGFDPQAEQARADGAFA
EEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCEE
ACGGAPRHPLADHAYLLEEKERPGELMPVMEDEHGTYILNSRDLRAVEHVHRLVAMGVDS
ECCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHHCCCC
LKIEGRTKSRYYVARTAQVYRRAIDDAVAGRDFDPALLVELDGLAHRGYTAGFLQRHPAQ
EEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCHH
DLQNYGTGSSQPVRSLFVGEVVACGGGWAEVETRNRFAVGDRLEIIHPAGNRTVRLERMR
HHHHCCCCCCCHHHHHHHHHHEECCCCEEEEECCCEEEECCCEEEEECCCCCEEEEEEHH
AAASGEPLHVAAGSPLRVRIPLEGPAEGAMLARILDPATAEPAQARP
HHCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TLRPPELLLPAGSLDRMRTAYDFGADAVYAGQPRYSLRARNNEFRLEQIGQGIREAHAR
CCCCCCCEECCCCHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHC
GRKFFVTSNLLPHDDKVRTYLRDIEPVIALGPDALIMADPGLIMLVRERWPDMPIHLSVQ
CCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCEEEEECCCEEEEEHHHCCCCCEEEEEE
ANTVNAMAVKFWQRMGLARIILSRELSLDEIEGIRQQCPEIELEVFVHGALCIAYSGRCL
CCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEE
LSGYFNRRDANQGTCTNACRWSYAASPGTDATDSGEVRPLPLDGGFDPQAEQARADGAFA
EEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCEE
ACGGAPRHPLADHAYLLEEKERPGELMPVMEDEHGTYILNSRDLRAVEHVHRLVAMGVDS
ECCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHHCCCC
LKIEGRTKSRYYVARTAQVYRRAIDDAVAGRDFDPALLVELDGLAHRGYTAGFLQRHPAQ
EEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCHH
DLQNYGTGSSQPVRSLFVGEVVACGGGWAEVETRNRFAVGDRLEIIHPAGNRTVRLERMR
HHHHCCCCCCCHHHHHHHHHHEECCCCEEEEECCCEEEECCCEEEEECCCCCEEEEEEHH
AAASGEPLHVAAGSPLRVRIPLEGPAEGAMLARILDPATAEPAQARP
HHCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]