| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610874
Identifier: 120610874
GI number: 120610874
Start: 2420844
End: 2421137
Strand: Reverse
Name: 120610874
Synonym: Aave_2200
Alternate gene names: NA
Gene position: 2421137-2420844 (Counterclockwise)
Preceding gene: 120610875
Following gene: 120610873
Centisome position: 45.23
GC content: 68.03
Gene sequence:
>294_bases ATGGCCGAAGACGTGCTCGACGACCGCGAAGTCGCCAAGCTCCGGTGGCGCTGCCGCCGGGGCCTGGTGGAGAACGACCT CTTCATCGAGCAGTTCTTCGCCAACCATGGCTCCCGCCTGACGCACCGCCAGGCACAGGGCATCACCATCCTGATGGACC TCGCCGACAACGACCTGCTGGACCTGCTGCTGCGGCGCAAGGAACCGGCGGGCGAGGTCGATACCGCCGAGGTCAGGGAC GTGCTCGAACTGCTGCGCCACCGCGCGCCGGCAACTCCTCCGCTTGCGGGCTAA
Upstream 100 bases:
>100_bases TCATGAACTGCGTGGACGTGTGCCCGAAGGGACTCAATCCGACGAAGGCCATCGGTAAGATCAAGGAACTGATGGTGCGC CGCGCCGTCTGACTTTGCAC
Downstream 100 bases:
>100_bases CCACTACCACCCAAGGAAACTCAGAATGAAACTGGCAGACAACAAAGCAACGCTCTCGTTCAGCAATGGCAGCCCGAGCG TGGAATTGCCCGTGTACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MAEDVLDDREVAKLRWRCRRGLVENDLFIEQFFANHGSRLTHRQAQGITILMDLADNDLLDLLLRRKEPAGEVDTAEVRD VLELLRHRAPATPPLAG
Sequences:
>Translated_97_residues MAEDVLDDREVAKLRWRCRRGLVENDLFIEQFFANHGSRLTHRQAQGITILMDLADNDLLDLLLRRKEPAGEVDTAEVRD VLELLRHRAPATPPLAG >Mature_96_residues AEDVLDDREVAKLRWRCRRGLVENDLFIEQFFANHGSRLTHRQAQGITILMDLADNDLLDLLLRRKEPAGEVDTAEVRDV LELLRHRAPATPPLAG
Specific function: Unknown
COG id: COG2938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11085; Mature: 10954
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDVLDDREVAKLRWRCRRGLVENDLFIEQFFANHGSRLTHRQAQGITILMDLADNDLL CCCCHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCHHH DLLLRRKEPAGEVDTAEVRDVLELLRHRAPATPPLAG HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AEDVLDDREVAKLRWRCRRGLVENDLFIEQFFANHGSRLTHRQAQGITILMDLADNDLL CCCHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCHHH DLLLRRKEPAGEVDTAEVRDVLELLRHRAPATPPLAG HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA