Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610859
Identifier: 120610859
GI number: 120610859
Start: 2402930
End: 2403595
Strand: Direct
Name: 120610859
Synonym: Aave_2185
Alternate gene names: NA
Gene position: 2402930-2403595 (Clockwise)
Preceding gene: 120610853
Following gene: 120610860
Centisome position: 44.89
GC content: 64.11
Gene sequence:
>666_bases ATGACTTTTCGTCCCAAGTATGTGACTTTCGACTGCTATGGCACGCTCACCCGCTTTCGCATGGGTGAGCTGACGCGCGA GTTGTTCGCCGATCGGATTCCGGCGGAGCGCATGGAGCAGTTCATCGCCGATTTCACCGCCTACCGCTTCGACGAAGTGC TGGGCGACTGGCAGCCCTACGAGGTGGTGCTGAAGAATGCCGTGCGCCGCCTGTGCAAGAAGTGGAAGATCCAGTACTTC GACACCGACGGCCAGACTTACTACGACGCCGTGCCCACCTGGGACCCCCACGCCGACGTGCCGGCCGGCCTCGCCAAGGT GGCCAAGGAGATTCCGCTGGTCATCCTCTCGAACGCTGCCGACGAGCAGATCCAGAAGAACGTGGCCATGCTGGGCGCGC CGTTCCACCGCGTCTACACCGCGCAGCAGGCCCAGGCCTACAAGCCCCGGCTCAAGGCCTTCGAATACATGCTCGACTCG CTGGGCTGCAATCCCGAGGACGTGCTGCACGTGTCTTCCAGCCTGCGCTACGACCTGATGTCGGCCGACGACATCGGCAT CGTCCACAAGGTGTTCGTGAACCGCGGCCACGGCCCCGGCAACCCTGCCTACCGCTACACCGAGATCCAGGACATCGGCG GCCTGCCCGGCGTGGTGGGGCTCTGA
Upstream 100 bases:
>100_bases CGCGGTGCTCCAATGTCTTCGACATCACTTTGTCGCAAATCGGCAAGCAACGGTGCGGCCAGCGACGTTCGACCACCGAA CCCATGAAGGAACAGAAACC
Downstream 100 bases:
>100_bases CGCGCCCTTTCCCCCTCCGCCCCTTGAAACCCTGTCCGCACACCTGCCCGCCATGAAGCTCGATTCCTACTGGCTCGATT CACTGCCGCCCCTGGCGGTG
Product: haloacid dehalogenase
Products: NA
Alternate protein names: HAD Family Hydrolase; Hydrolase; Haloalkanoic Acid Dehalogenase; Dehalogenase; Haloacid Dehalogenase I; 2-Haloacid Dehalogenase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase; 2-Haloacid Halidohydrolase IVA; 2-Haloalkanoic Acid Dehalogenase; Haloacid Dehydrogenase; 2-Haloacid Halidohydrolase Type II; HAD-Superfamily Hydrolase; Dehalogenase Protein; Haloacid Dehalogenase Type II Truncated; 2-Haloacid Halidohydrolase IVa; HAD Superfamily Haloalkanoic Acid Dehalogenase
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTFRPKYVTFDCYGTLTRFRMGELTRELFADRIPAERMEQFIADFTAYRFDEVLGDWQPYEVVLKNAVRRLCKKWKIQYF DTDGQTYYDAVPTWDPHADVPAGLAKVAKEIPLVILSNAADEQIQKNVAMLGAPFHRVYTAQQAQAYKPRLKAFEYMLDS LGCNPEDVLHVSSSLRYDLMSADDIGIVHKVFVNRGHGPGNPAYRYTEIQDIGGLPGVVGL
Sequences:
>Translated_221_residues MTFRPKYVTFDCYGTLTRFRMGELTRELFADRIPAERMEQFIADFTAYRFDEVLGDWQPYEVVLKNAVRRLCKKWKIQYF DTDGQTYYDAVPTWDPHADVPAGLAKVAKEIPLVILSNAADEQIQKNVAMLGAPFHRVYTAQQAQAYKPRLKAFEYMLDS LGCNPEDVLHVSSSLRYDLMSADDIGIVHKVFVNRGHGPGNPAYRYTEIQDIGGLPGVVGL >Mature_220_residues TFRPKYVTFDCYGTLTRFRMGELTRELFADRIPAERMEQFIADFTAYRFDEVLGDWQPYEVVLKNAVRRLCKKWKIQYFD TDGQTYYDAVPTWDPHADVPAGLAKVAKEIPLVILSNAADEQIQKNVAMLGAPFHRVYTAQQAQAYKPRLKAFEYMLDSL GCNPEDVLHVSSSLRYDLMSADDIGIVHKVFVNRGHGPGNPAYRYTEIQDIGGLPGVVGL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25166; Mature: 25035
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFRPKYVTFDCYGTLTRFRMGELTRELFADRIPAERMEQFIADFTAYRFDEVLGDWQPY CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHH EVVLKNAVRRLCKKWKIQYFDTDGQTYYDAVPTWDPHADVPAGLAKVAKEIPLVILSNAA HHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCH DEQIQKNVAMLGAPFHRVYTAQQAQAYKPRLKAFEYMLDSLGCNPEDVLHVSSSLRYDLM HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC SADDIGIVHKVFVNRGHGPGNPAYRYTEIQDIGGLPGVVGL CCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCC >Mature Secondary Structure TFRPKYVTFDCYGTLTRFRMGELTRELFADRIPAERMEQFIADFTAYRFDEVLGDWQPY CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHH EVVLKNAVRRLCKKWKIQYFDTDGQTYYDAVPTWDPHADVPAGLAKVAKEIPLVILSNAA HHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCH DEQIQKNVAMLGAPFHRVYTAQQAQAYKPRLKAFEYMLDSLGCNPEDVLHVSSSLRYDLM HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC SADDIGIVHKVFVNRGHGPGNPAYRYTEIQDIGGLPGVVGL CCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA