Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ordL [H]
Identifier: 120610860
GI number: 120610860
Start: 2403648
End: 2404937
Strand: Direct
Name: ordL [H]
Synonym: Aave_2186
Alternate gene names: 120610860
Gene position: 2403648-2404937 (Clockwise)
Preceding gene: 120610859
Following gene: 120610861
Centisome position: 44.9
GC content: 71.71
Gene sequence:
>1290_bases ATGAAGCTCGATTCCTACTGGCTCGATTCACTGCCGCCCCTGGCGGTGCCCACGCCCGGCCTGCCTGCCCGGGTGGACGT GGCCATCGTGGGAGCGGGTTTCACCGGACTGTCCGCTGCCCACGCGCTGGCGGGCAAAGGCGCCAGCGTGGCGGTCCTGG ACGCGGGGGCCACCGTGGCGCCCGAGGCTTCGGGGCGCAATGGCGGCCACGTGAACAACGGGCTGGCCGTGGACTACGCG GACGTGGCCGCCCGCGTCGGAGTGGAGCAGGCACGCGCCTGGTACCACGCCTACGATGCCGCGGTGGACACGGTGGCGCG GCTGGTGCGCGAGGAGTCCATCGACTGCGATTTCCTGCGGCACGGCAAGCTCAAGCTCGCTACCCGGCCGCAGCACCTGG ACGCGCTGCGGCGCAGCGCGGAACGGCTCATCGCCGATGGCGTGGATACCGACGTCGAGGTGCTCGACGCGGACCGCGTG GCCGCGGAAGTGCAGAGCGACCGCTTCATCGGCGGCCTGCTCTACAAGCGCAGCGGCCAGATGCACATGGGGCGCTTCGC CCAGGGCCTGGCCCGCGCCGCGGTGCGCCGCGGCGCGCAGATCCACCTGGATACCCGCGTGGACCGCCTCGAGCGGCTGC AGGGTCAGGCCCACCGCCTGCACACCTCCCGCGGCACGGTCGAGGCGAAGCAGGTGCTGCTGGCCACCGGTGCCTCGCGC CACGGCGGCTACGGCACGTTCGGCTGGCTGCGCCGTCGCATCGTGCCGATCGGCAGCTTCATCGTGGTGACCGAGCCGCT GGGCGCGGAGCGCGCGCAGGCCCTGCTGGCCGGCCGCCGCACCTACGTGACCATCGCCAACATCCACCATTACTTCCGGC TCACTGCCGACCACCGCCTGGTGTTCGGCGGACGCGCGAAGTTCGCTGTTTCCAGCCCGCAGCAGGATGCGGCCAGCGGC GAGATCCTGCGCCAGGGGCTCGCGGAGACCTTTCCGCACCTCGGGAAGGTGCGCATCGACCACTGCTGGGGCGGCCTCGT GGACATGACGCAGGACCGCCTGCCCCATGCCGGCGAGCGCGACGGCGTCTTCCATTCGATGGGCTACAGCGGGCATGGCA CGCAGATGTCCGTCCACATGGGCCAGTGCATGGCCGAGGTGATGGCCGGCAATGCCGCGGCCAATCCATGGCGCGGCCGC GAGTGGCCAGCCATTCCCGGGCATCTCGGGCCGCCCTGGTTCCTGCCGGCCGTGGGGCTGTACTACCGCCTCAAGGACCG GATCGGCTGA
Upstream 100 bases:
>100_bases ACCGAGATCCAGGACATCGGCGGCCTGCCCGGCGTGGTGGGGCTCTGACGCGCCCTTTCCCCCTCCGCCCCTTGAAACCC TGTCCGCACACCTGCCCGCC
Downstream 100 bases:
>100_bases CGCCCGCCGCCACCCACCCGTTTTCTCCACCGTCCCTTCCCTTTTTTTCCCAGGCCCCAAGGAGTCCACCATGAGCGACA AAATCCCCGAGTTCGACCGC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKLDSYWLDSLPPLAVPTPGLPARVDVAIVGAGFTGLSAAHALAGKGASVAVLDAGATVAPEASGRNGGHVNNGLAVDYA DVAARVGVEQARAWYHAYDAAVDTVARLVREESIDCDFLRHGKLKLATRPQHLDALRRSAERLIADGVDTDVEVLDADRV AAEVQSDRFIGGLLYKRSGQMHMGRFAQGLARAAVRRGAQIHLDTRVDRLERLQGQAHRLHTSRGTVEAKQVLLATGASR HGGYGTFGWLRRRIVPIGSFIVVTEPLGAERAQALLAGRRTYVTIANIHHYFRLTADHRLVFGGRAKFAVSSPQQDAASG EILRQGLAETFPHLGKVRIDHCWGGLVDMTQDRLPHAGERDGVFHSMGYSGHGTQMSVHMGQCMAEVMAGNAAANPWRGR EWPAIPGHLGPPWFLPAVGLYYRLKDRIG
Sequences:
>Translated_429_residues MKLDSYWLDSLPPLAVPTPGLPARVDVAIVGAGFTGLSAAHALAGKGASVAVLDAGATVAPEASGRNGGHVNNGLAVDYA DVAARVGVEQARAWYHAYDAAVDTVARLVREESIDCDFLRHGKLKLATRPQHLDALRRSAERLIADGVDTDVEVLDADRV AAEVQSDRFIGGLLYKRSGQMHMGRFAQGLARAAVRRGAQIHLDTRVDRLERLQGQAHRLHTSRGTVEAKQVLLATGASR HGGYGTFGWLRRRIVPIGSFIVVTEPLGAERAQALLAGRRTYVTIANIHHYFRLTADHRLVFGGRAKFAVSSPQQDAASG EILRQGLAETFPHLGKVRIDHCWGGLVDMTQDRLPHAGERDGVFHSMGYSGHGTQMSVHMGQCMAEVMAGNAAANPWRGR EWPAIPGHLGPPWFLPAVGLYYRLKDRIG >Mature_429_residues MKLDSYWLDSLPPLAVPTPGLPARVDVAIVGAGFTGLSAAHALAGKGASVAVLDAGATVAPEASGRNGGHVNNGLAVDYA DVAARVGVEQARAWYHAYDAAVDTVARLVREESIDCDFLRHGKLKLATRPQHLDALRRSAERLIADGVDTDVEVLDADRV AAEVQSDRFIGGLLYKRSGQMHMGRFAQGLARAAVRRGAQIHLDTRVDRLERLQGQAHRLHTSRGTVEAKQVLLATGASR HGGYGTFGWLRRRIVPIGSFIVVTEPLGAERAQALLAGRRTYVTIANIHHYFRLTADHRLVFGGRAKFAVSSPQQDAASG EILRQGLAETFPHLGKVRIDHCWGGLVDMTQDRLPHAGERDGVFHSMGYSGHGTQMSVHMGQCMAEVMAGNAAANPWRGR EWPAIPGHLGPPWFLPAVGLYYRLKDRIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=409, Percent_Identity=31.0513447432763, Blast_Score=163, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46383; Mature: 46383
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDSYWLDSLPPLAVPTPGLPARVDVAIVGAGFTGLSAAHALAGKGASVAVLDAGATVA CCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCEEC PEASGRNGGHVNNGLAVDYADVAARVGVEQARAWYHAYDAAVDTVARLVREESIDCDFLR CCCCCCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH HGKLKLATRPQHLDALRRSAERLIADGVDTDVEVLDADRVAAEVQSDRFIGGLLYKRSGQ CCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCHHHHHEECCCCC MHMGRFAQGLARAAVRRGAQIHLDTRVDRLERLQGQAHRLHTSRGTVEAKQVLLATGASR CHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCC HGGYGTFGWLRRRIVPIGSFIVVTEPLGAERAQALLAGRRTYVTIANIHHYFRLTADHRL CCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEEEEEEEEEEECCCEE VFGGRAKFAVSSPQQDAASGEILRQGLAETFPHLGKVRIDHCWGGLVDMTQDRLPHAGER EECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHCCCHHHHHHHHCCCCCCC DGVFHSMGYSGHGTQMSVHMGQCMAEVMAGNAAANPWRGREWPAIPGHLGPPWFLPAVGL CCCEEECCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH YYRLKDRIG HHHHHHHCC >Mature Secondary Structure MKLDSYWLDSLPPLAVPTPGLPARVDVAIVGAGFTGLSAAHALAGKGASVAVLDAGATVA CCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCEEC PEASGRNGGHVNNGLAVDYADVAARVGVEQARAWYHAYDAAVDTVARLVREESIDCDFLR CCCCCCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH HGKLKLATRPQHLDALRRSAERLIADGVDTDVEVLDADRVAAEVQSDRFIGGLLYKRSGQ CCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCHHHHHEECCCCC MHMGRFAQGLARAAVRRGAQIHLDTRVDRLERLQGQAHRLHTSRGTVEAKQVLLATGASR CHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCC HGGYGTFGWLRRRIVPIGSFIVVTEPLGAERAQALLAGRRTYVTIANIHHYFRLTADHRL CCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEEEEEEEEEEECCCEE VFGGRAKFAVSSPQQDAASGEILRQGLAETFPHLGKVRIDHCWGGLVDMTQDRLPHAGER EECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHCCCHHHHHHHHCCCCCCC DGVFHSMGYSGHGTQMSVHMGQCMAEVMAGNAAANPWRGREWPAIPGHLGPPWFLPAVGL CCCEEECCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH YYRLKDRIG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]