Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610852
Identifier: 120610852
GI number: 120610852
Start: 2395515
End: 2396213
Strand: Direct
Name: 120610852
Synonym: Aave_2178
Alternate gene names: NA
Gene position: 2395515-2396213 (Clockwise)
Preceding gene: 120610850
Following gene: 120610853
Centisome position: 44.75
GC content: 67.53
Gene sequence:
>699_bases ATGGCCTTGCGTGATTTCAAAGTGCTCACCTTCGACGTCGTCGGCACCCTCATCGATTTCGAGGGCGGCATGCTGGCTTA CCTGCGCGAGGCGGCGCCGGGTTCGCCCGTGTCCGACGAGGCGTTCCTCGCGGCGTACCGCACGGCCAGGAAGAGCGGCG ATACCGATGCGTATCCCGATGACCTCGTGCGCTGCTGGCATGCGATCGCACCGCAACTGGGCCTGCCCGACAGCGATGCG ATCGCACAGGGTTTGCGCGATTCCGTGCCGCGCTGGCCGGCGTTCCCGGACGCGCCCGAGGCGCTGCAGCGCCTGCGCCG GCATTTCAAGCTGGTGACGATGACCAATGCGCAGGCGTGGGCGCTGGCGCATTTCGACCGCACGCTCGGCTCGCCCTTCG ACCTGCTGCTGTCCGCCGACGATGCGCTGTGCGAGAAGCCCGACGCACGTTATTTCGCCTATGCGCGCGGCCGCTATGAA GCCGCCTGGGGTTTCCGGCAGGCGGACAATCTGCATGTGGCGCAGAGCCAGTACCATGACATCGGCATCGCGCGGCGGCT GGGCATCCGCAGCTGCTGGATCGAGCGGCGCCACGGCATGGAGGGCTCCGGCGGCACCATCGAATCCGAGCACACCGTGC CGGACTACCATTTTCTGACGCTGGCGCAGCTGGCCGACGCGGTAGAGGCGGGGCAATGA
Upstream 100 bases:
>100_bases CCATGGCATGGGCCGCACCGCCGCTCATGGCGAGCCGCCTGGTTCCCTTTTTCCGTTCCGTTCCCTCCCCGTTGTTGGCA ATTACCCAGGAGTTCAACCC
Downstream 100 bases:
>100_bases GCCTGGAGGACGTTGCGCGGCCCGTGGCCGACCTGCTGCCCGATCTGGTCACCCTGCGCCGCGATCTGCATGCCCATCCC GAGCTGGCCTACCAGGAGCG
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD Family Hydrolase; 2-Haloalkanoic Acid Dehalogenase; HAD-Superfamily Hydrolase; Hydrolase; Haloalkanoic Acid Dehalogenase; 2-Haloacid Halidohydrolase IVA; Haloacid Dehalogenase I; 2-Haloacid Dehalogenase; 2-Haloacid Dehalogenase Protein; Haloacid Dehalogenase-Like Hydrolase; 2-Haloalkanoic Acid Dehalogenase Protein; Hydrolase Of HAD Superfamily; Haloacid Dehalogenase
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MALRDFKVLTFDVVGTLIDFEGGMLAYLREAAPGSPVSDEAFLAAYRTARKSGDTDAYPDDLVRCWHAIAPQLGLPDSDA IAQGLRDSVPRWPAFPDAPEALQRLRRHFKLVTMTNAQAWALAHFDRTLGSPFDLLLSADDALCEKPDARYFAYARGRYE AAWGFRQADNLHVAQSQYHDIGIARRLGIRSCWIERRHGMEGSGGTIESEHTVPDYHFLTLAQLADAVEAGQ
Sequences:
>Translated_232_residues MALRDFKVLTFDVVGTLIDFEGGMLAYLREAAPGSPVSDEAFLAAYRTARKSGDTDAYPDDLVRCWHAIAPQLGLPDSDA IAQGLRDSVPRWPAFPDAPEALQRLRRHFKLVTMTNAQAWALAHFDRTLGSPFDLLLSADDALCEKPDARYFAYARGRYE AAWGFRQADNLHVAQSQYHDIGIARRLGIRSCWIERRHGMEGSGGTIESEHTVPDYHFLTLAQLADAVEAGQ >Mature_231_residues ALRDFKVLTFDVVGTLIDFEGGMLAYLREAAPGSPVSDEAFLAAYRTARKSGDTDAYPDDLVRCWHAIAPQLGLPDSDAI AQGLRDSVPRWPAFPDAPEALQRLRRHFKLVTMTNAQAWALAHFDRTLGSPFDLLLSADDALCEKPDARYFAYARGRYEA AWGFRQADNLHVAQSQYHDIGIARRLGIRSCWIERRHGMEGSGGTIESEHTVPDYHFLTLAQLADAVEAGQ
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25793; Mature: 25662
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRDFKVLTFDVVGTLIDFEGGMLAYLREAAPGSPVSDEAFLAAYRTARKSGDTDAYPD CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH DLVRCWHAIAPQLGLPDSDAIAQGLRDSVPRWPAFPDAPEALQRLRRHFKLVTMTNAQAW HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCHH ALAHFDRTLGSPFDLLLSADDALCEKPDARYFAYARGRYEAAWGFRQADNLHVAQSQYHD HHHHHHHHHCCCHHEEEECCHHHHCCCCCCEEEEECCCCHHHCCCCCCCCEEHHHHHHHH IGIARRLGIRSCWIERRHGMEGSGGTIESEHTVPDYHFLTLAQLADAVEAGQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALRDFKVLTFDVVGTLIDFEGGMLAYLREAAPGSPVSDEAFLAAYRTARKSGDTDAYPD CCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH DLVRCWHAIAPQLGLPDSDAIAQGLRDSVPRWPAFPDAPEALQRLRRHFKLVTMTNAQAW HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCHH ALAHFDRTLGSPFDLLLSADDALCEKPDARYFAYARGRYEAAWGFRQADNLHVAQSQYHD HHHHHHHHHCCCHHEEEECCHHHHCCCCCCEEEEECCCCHHHCCCCCCCCEEHHHHHHHH IGIARRLGIRSCWIERRHGMEGSGGTIESEHTVPDYHFLTLAQLADAVEAGQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA