Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610845
Identifier: 120610845
GI number: 120610845
Start: 2387155
End: 2388108
Strand: Direct
Name: 120610845
Synonym: Aave_2171
Alternate gene names: NA
Gene position: 2387155-2388108 (Clockwise)
Preceding gene: 120610844
Following gene: 120610846
Centisome position: 44.6
GC content: 67.51
Gene sequence:
>954_bases ATGCGCACCCTGCCGCCCGTTTTCCAGAAACTTTCGCTGCCGGTCATCGGCTCGCCGCTGTTCATCATCAGCAATCCGAA GCTGGTGATCGCGCAGTGCCAGGCCGGCATCGTCGGCTCCATGCCGGCGCTCAACGCCCGGCCTGCCGAACTGCTGGACG AATGGCTCGCCGAGATCACCGAAGCGCTCGCGGCCTGGGACCGCGCCCATCCGGAATCGCCCGCCGCACCGTTCGCCATC AACCAGATCGTGCACAAGAGCAACGACCGGCTGGAGCACGACATGGAGGTCTGCGCCAAGTACAAGGTGCCGATCGTCAT CACGTCCCTGGGCGCGCGCGAGGACGTGAACCAGGCCGTGCACGGCTGGGGCGGCGTGGTGCTGCACGACATCATCAACA ACAAGTTCGCCCACAAGGCCATCGAGAAGGGTGCCGACGGCCTGATCGCCGTGGCGGCGGGCGCGGGCGGCCACGCGGGC ATCAAGAGCCCGTTCGCGCTCATCCAGGAAATCCGCCAGTGGTTCGAGGGGCCGCTGGCGCTCTCGGGCTCGATCGCCTC CGGCGGCGCCATCCTGGCCGCGCAGGCCATGGGCGCCGACTTCGCCTATATCGGCTCGGCGTTCATCGCCACGCACGAGG CGCGCGCGCAGGAGGCCTACAAGCAGGCCATCGTGGATGGCAACTCCGACGACATCGTCTACAGCAACCTCTTCACGGGC GTGCATGGCAACTACCTCGCGCCTTCCATCCGTGCCGCAGGACTCGATCCGGACCACCTGCCCGAATCGGATCCCAGCAA GATGAACTTCGGTGGCGATGCGAAGAAGGCCTGGAAGGACATCTGGGGCTGCGGGCAGGGCATCGGCGCGATCACCGAAG TGACGGGCGCGGCCGAGCTGGTCGGGCGCCTGCGCCGGGAATACACTGCGGCCCGCGAACGCCTGGCGCTCTGA
Upstream 100 bases:
>100_bases CCAGCGTGACGGCGCTCGCGCTGGACGCTTTCTGAGCGAACCGCTTCCGCACCCGCTGCCATCGACAGACACCCCAGAAC GACAAACCGGAGACTTTCCC
Downstream 100 bases:
>100_bases ACGGCAGCGGCGCTTTCCGCGCTCCGGGCGGAAGCGGCATCCCTCGGCGCCGTACTGGGGCAAAATAATGCCCCTCCCCC GGCCCTACACAACACCAAGA
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family; Dioxygenase; Oxidoreductase; 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Npd; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase-Like Dioxygenase; Dioxygenase Protein; Transmembrane Protein; 2-Nitropropane Dioxygenase Protein; Dioxygenase Oxidoreductase -Nitropropane Dioxygenase Npd
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRTLPPVFQKLSLPVIGSPLFIISNPKLVIAQCQAGIVGSMPALNARPAELLDEWLAEITEALAAWDRAHPESPAAPFAI NQIVHKSNDRLEHDMEVCAKYKVPIVITSLGAREDVNQAVHGWGGVVLHDIINNKFAHKAIEKGADGLIAVAAGAGGHAG IKSPFALIQEIRQWFEGPLALSGSIASGGAILAAQAMGADFAYIGSAFIATHEARAQEAYKQAIVDGNSDDIVYSNLFTG VHGNYLAPSIRAAGLDPDHLPESDPSKMNFGGDAKKAWKDIWGCGQGIGAITEVTGAAELVGRLRREYTAARERLAL
Sequences:
>Translated_317_residues MRTLPPVFQKLSLPVIGSPLFIISNPKLVIAQCQAGIVGSMPALNARPAELLDEWLAEITEALAAWDRAHPESPAAPFAI NQIVHKSNDRLEHDMEVCAKYKVPIVITSLGAREDVNQAVHGWGGVVLHDIINNKFAHKAIEKGADGLIAVAAGAGGHAG IKSPFALIQEIRQWFEGPLALSGSIASGGAILAAQAMGADFAYIGSAFIATHEARAQEAYKQAIVDGNSDDIVYSNLFTG VHGNYLAPSIRAAGLDPDHLPESDPSKMNFGGDAKKAWKDIWGCGQGIGAITEVTGAAELVGRLRREYTAARERLAL >Mature_317_residues MRTLPPVFQKLSLPVIGSPLFIISNPKLVIAQCQAGIVGSMPALNARPAELLDEWLAEITEALAAWDRAHPESPAAPFAI NQIVHKSNDRLEHDMEVCAKYKVPIVITSLGAREDVNQAVHGWGGVVLHDIINNKFAHKAIEKGADGLIAVAAGAGGHAG IKSPFALIQEIRQWFEGPLALSGSIASGGAILAAQAMGADFAYIGSAFIATHEARAQEAYKQAIVDGNSDDIVYSNLFTG VHGNYLAPSIRAAGLDPDHLPESDPSKMNFGGDAKKAWKDIWGCGQGIGAITEVTGAAELVGRLRREYTAARERLAL
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33623; Mature: 33623
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLPPVFQKLSLPVIGSPLFIISNPKLVIAQCQAGIVGSMPALNARPAELLDEWLAEIT CCCCCHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH EALAAWDRAHPESPAAPFAINQIVHKSNDRLEHDMEVCAKYKVPIVITSLGAREDVNQAV HHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH HGWGGVVLHDIINNKFAHKAIEKGADGLIAVAAGAGGHAGIKSPFALIQEIRQWFEGPLA HHCCHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEE LSGSIASGGAILAAQAMGADFAYIGSAFIATHEARAQEAYKQAIVDGNSDDIVYSNLFTG ECCCCCCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHC VHGNYLAPSIRAAGLDPDHLPESDPSKMNFGGDAKKAWKDIWGCGQGIGAITEVTGAAEL CCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH VGRLRREYTAARERLAL HHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTLPPVFQKLSLPVIGSPLFIISNPKLVIAQCQAGIVGSMPALNARPAELLDEWLAEIT CCCCCHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH EALAAWDRAHPESPAAPFAINQIVHKSNDRLEHDMEVCAKYKVPIVITSLGAREDVNQAV HHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH HGWGGVVLHDIINNKFAHKAIEKGADGLIAVAAGAGGHAGIKSPFALIQEIRQWFEGPLA HHCCHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEE LSGSIASGGAILAAQAMGADFAYIGSAFIATHEARAQEAYKQAIVDGNSDDIVYSNLFTG ECCCCCCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHC VHGNYLAPSIRAAGLDPDHLPESDPSKMNFGGDAKKAWKDIWGCGQGIGAITEVTGAAEL CCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH VGRLRREYTAARERLAL HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA