Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610846
Identifier: 120610846
GI number: 120610846
Start: 2388269
End: 2389450
Strand: Direct
Name: 120610846
Synonym: Aave_2172
Alternate gene names: NA
Gene position: 2388269-2389450 (Clockwise)
Preceding gene: 120610845
Following gene: 120610847
Centisome position: 44.62
GC content: 71.4
Gene sequence:
>1182_bases ATGCCGTCCCCACCGTCCCGCAACACCCTGATCGATTCGGTCAAGGGCATCGCCTGCGCCACCATCGTGGCACACCACCT GGCCTTCTACGGGCCCATGTCCGAAGTGGCCCAGCCTCTGATGCCGGGCCTCATCGCCTGGCTGGCCGACTATGGCCGCA TGGCCGTGCAGGTCTTCCTGGTGCTGGGCGGCTATCTGGCGGCGGGGCGGCTGGCGGCGGCCGGAGGGCCACGCTGGAAC GGCACCGCACCGGAGATCGGGCGGCGCTTCGTGCGCCTCGCGGTGCCGTATGCCGTGGCCCTGGTGCTGGCCGTGCTGGC CGCGGCGGCGGTGCGGCCCTGGCTGAAACATCCTTCCGTGCCCGCGGAGCCGAGCCTGCCGCAACTGCTGGCCAACGCGC TGATGCTGCAGGACATCGCGGGCCAGGAGGCGCTGTCGGCCGGGGTCTGGTACGTGGCGATCGACTTCCAGCTCTTCGTG CTCTCGGCGCTGCTGGTGGCCGCCGCGCGCCACGGTGCCCGCGTGCTGCCGGTGCGAGCCCGCGGCTGCACCCAGCCGGC GGCCCGGGTGGCCGTGGCCGCGGCCACGGCGCTGTCGCTCTGGGAGCTCAACCGCCATCCGTCACTCGATGCCTGGGCGG TGTATTTCTTCGGTGCCTATGGCCTGGGCATGATGGCGCGCTGGGCCGTGGCTGCACCTCGCGGCAGCCGCGCCGCTGGC GCGTGGCTGGTGCTGATCGGCCTGTGGGGCGCGGTGGCGCTGGCGCTGGATTTCCGGGAGCGCATCGCGGTGGCATGGTG CACGGGACTCGGGCTGGTGGTGCTGCTGCGCTGGCAGGAGGGCCGCGCGGTGCTGCAGCGAGCCGGCGTGCCCGCGGCGC ATCGGGCGCAGTCCGCCTGGCGCGATGGATTGGCACGGCTCGGCCGCATTTCCTACTCGGTATTCCTGGTGCACTTTCCT GTGTGTTTGCTGGTCAATGCGGCCGTCACCGCGGCTTGGCCCAGTTCGCCTGCCATGAATGCCTTGGGCATGGCTGGCGC CATGGGGCTGTCGGTAGCGGCAGGGAAACTACTCTACGAACGGGTCGAACGCCACATGCCGTCGTGGGCACTTGCACTGC GCTGGCAGGCTGGCGTCGTAGGGGCGGGCGTGGTGATGCTGGCTGCAGGCCGGTTGGGGTGA
Upstream 100 bases:
>100_bases CAAAATAATGCCCCTCCCCCGGCCCTACACAACACCAAGAACCGCTCCTCGCACATCGCGCTGCCCTGTACGGGTGCGCT GCCGTGCGCGCGCCTTCCGC
Downstream 100 bases:
>100_bases GTCGGTCGGGCGGGACGTTGCGACCAAGGTGGCGTTCACCGCCGTGCCGCTCTTGAGCTTGGCCGGCCCGGCAGTTGTCT GCTGCAGGGGGCTTCGGCGC
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MPSPPSRNTLIDSVKGIACATIVAHHLAFYGPMSEVAQPLMPGLIAWLADYGRMAVQVFLVLGGYLAAGRLAAAGGPRWN GTAPEIGRRFVRLAVPYAVALVLAVLAAAAVRPWLKHPSVPAEPSLPQLLANALMLQDIAGQEALSAGVWYVAIDFQLFV LSALLVAAARHGARVLPVRARGCTQPAARVAVAAATALSLWELNRHPSLDAWAVYFFGAYGLGMMARWAVAAPRGSRAAG AWLVLIGLWGAVALALDFRERIAVAWCTGLGLVVLLRWQEGRAVLQRAGVPAAHRAQSAWRDGLARLGRISYSVFLVHFP VCLLVNAAVTAAWPSSPAMNALGMAGAMGLSVAAGKLLYERVERHMPSWALALRWQAGVVGAGVVMLAAGRLG
Sequences:
>Translated_393_residues MPSPPSRNTLIDSVKGIACATIVAHHLAFYGPMSEVAQPLMPGLIAWLADYGRMAVQVFLVLGGYLAAGRLAAAGGPRWN GTAPEIGRRFVRLAVPYAVALVLAVLAAAAVRPWLKHPSVPAEPSLPQLLANALMLQDIAGQEALSAGVWYVAIDFQLFV LSALLVAAARHGARVLPVRARGCTQPAARVAVAAATALSLWELNRHPSLDAWAVYFFGAYGLGMMARWAVAAPRGSRAAG AWLVLIGLWGAVALALDFRERIAVAWCTGLGLVVLLRWQEGRAVLQRAGVPAAHRAQSAWRDGLARLGRISYSVFLVHFP VCLLVNAAVTAAWPSSPAMNALGMAGAMGLSVAAGKLLYERVERHMPSWALALRWQAGVVGAGVVMLAAGRLG >Mature_392_residues PSPPSRNTLIDSVKGIACATIVAHHLAFYGPMSEVAQPLMPGLIAWLADYGRMAVQVFLVLGGYLAAGRLAAAGGPRWNG TAPEIGRRFVRLAVPYAVALVLAVLAAAAVRPWLKHPSVPAEPSLPQLLANALMLQDIAGQEALSAGVWYVAIDFQLFVL SALLVAAARHGARVLPVRARGCTQPAARVAVAAATALSLWELNRHPSLDAWAVYFFGAYGLGMMARWAVAAPRGSRAAGA WLVLIGLWGAVALALDFRERIAVAWCTGLGLVVLLRWQEGRAVLQRAGVPAAHRAQSAWRDGLARLGRISYSVFLVHFPV CLLVNAAVTAAWPSSPAMNALGMAGAMGLSVAAGKLLYERVERHMPSWALALRWQAGVVGAGVVMLAAGRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41467; Mature: 41336
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPPSRNTLIDSVKGIACATIVAHHLAFYGPMSEVAQPLMPGLIAWLADYGRMAVQVFL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGGYLAAGRLAAAGGPRWNGTAPEIGRRFVRLAVPYAVALVLAVLAAAAVRPWLKHPSV HHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAEPSLPQLLANALMLQDIAGQEALSAGVWYVAIDFQLFVLSALLVAAARHGARVLPVRA CCCCCHHHHHHHHHHHHHHCCHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECC RGCTQPAARVAVAAATALSLWELNRHPSLDAWAVYFFGAYGLGMMARWAVAAPRGSRAAG CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AWLVLIGLWGAVALALDFRERIAVAWCTGLGLVVLLRWQEGRAVLQRAGVPAAHRAQSAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHCCCCHHHHHHHHH RDGLARLGRISYSVFLVHFPVCLLVNAAVTAAWPSSPAMNALGMAGAMGLSVAAGKLLYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RVERHMPSWALALRWQAGVVGAGVVMLAAGRLG HHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCC >Mature Secondary Structure PSPPSRNTLIDSVKGIACATIVAHHLAFYGPMSEVAQPLMPGLIAWLADYGRMAVQVFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGGYLAAGRLAAAGGPRWNGTAPEIGRRFVRLAVPYAVALVLAVLAAAAVRPWLKHPSV HHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAEPSLPQLLANALMLQDIAGQEALSAGVWYVAIDFQLFVLSALLVAAARHGARVLPVRA CCCCCHHHHHHHHHHHHHHCCHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECC RGCTQPAARVAVAAATALSLWELNRHPSLDAWAVYFFGAYGLGMMARWAVAAPRGSRAAG CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AWLVLIGLWGAVALALDFRERIAVAWCTGLGLVVLLRWQEGRAVLQRAGVPAAHRAQSAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHCCCCHHHHHHHHH RDGLARLGRISYSVFLVHFPVCLLVNAAVTAAWPSSPAMNALGMAGAMGLSVAAGKLLYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RVERHMPSWALALRWQAGVVGAGVVMLAAGRLG HHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA