| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610804
Identifier: 120610804
GI number: 120610804
Start: 2342326
End: 2343642
Strand: Direct
Name: 120610804
Synonym: Aave_2128
Alternate gene names: NA
Gene position: 2342326-2343642 (Clockwise)
Preceding gene: 120610803
Following gene: 120610805
Centisome position: 43.76
GC content: 62.79
Gene sequence:
>1317_bases ATGGCACAACCATCGCACGCCTTGCCCAGCCCCATCGATGCTGCCAGCGTCCCGGAGGTCATCAATCACACGCAGTGGCC GAGCCAGTATTTCCAGCACGTGGACCCGCATGGGGACATCTTCCATGTCATGGTCAGCCGCACCTCCTATTCCATGCTGG ATCTGGAGCAAACCGACAAGGGCATGGTGCCCCGCCTGTTGCCACCGCAAGAGCAGGTACCGCTGTGCCAGGCCGACCAG TTCCAGGGTGAGGTCAACGAAACCAGCACCGTACAAGAGAGCGACTTCGCACCCTACAAGCCAAAATGCGATGTGCTGCT GGTGAACGCAACGGCTCATTCACCCACAGGCCAGCCGATGCAGCGCTGGCCCGTGGGATTCCGGTTCGGTGACATCGAAA AGCGGTTCCACGTGACGGGGCCGCGCCGGTACGCGCGGTCCCTCACAACGCTGGGAACACTGCAACTGACCGAGCCGGAG CCCGCAAAGCATGTCCCGTTGCGCTATGAACTGGCCTACGGCGGGCCGAACATCATCCGCCAGGAACGCTTGCTGCAGGC ATATGCGGACGGAGAAATCGGCTCGCTCACCGAGCAGCAACGCGCTCAGGCTCGCAAAGCCCATGCCGATCTGCCGGCAT TCTTCTTGGCCAATCCCATCGGATGCGGCCGTTTGCCCGATGCCATTCCTGACGCGGAGGCAGCGCTGGCTACGTTCTCG GCCGTTGATGCGGCACAGGCGAATGCCACTGCCCTGCGACCCGCGCCGCAGATAGAGGCATTCGAGATGCCCTACAACGG TCAGCGTGACTATCCCGTGATCGGGGTAGGTCCGGTGGGCCGCTGGTGGACGCCACGTGTCGCGCTCGCCGGCACGCACG ACGAAGCCTGGAAGAAGACGCAGTGGCCAAAGAGCCCACGTGACCACGACTACCGCTACTGGAACTGCGCGCCCGAAGAC CAGCAGATCGACTATCCCCAAGGTGGCGAGGAAATCGTGCTGGTGCATTTCACATCGACCGTGCACCACTCGGGCCCCTA CCGCTTTCTCCTGCCACGGCAGGATCTGCAATTGCTGGTACGCCTGCACGTTGGCGTGCTGATGTTCGCCCCCATGAACA TCGACACCGTGATCCTCGACATGGGCACCGGCATCCTCAGCATCGTGCGCCGCGCGGTCGTCAGCGCGAAGACCGATGTA CGGCAGCTGGAACTGGGCACATGGCCTGCGGGCACAGGCGTACAACTCGATGAGGCCATGCAGCAAGCCGCGCAGGCCAA CCGAAAAAGCAAAGGGACCGGTAGCCATGGCCAATGA
Upstream 100 bases:
>100_bases GGGCGGCCAAGTCACCATCAACGGCAAGGAAATCGATGTAGTCGGGACCAAGCACATTGGGCTGGATTCCAAGCGCATCG ACCTGAATTGAGGTGACGCT
Downstream 100 bases:
>100_bases AAACATTGTCGCCAAGGACGGCCGTTTCCGAATCGTCTGCCTCGCGCCAGATGTGTGCTTAACGCCCAGCAAGAACGGCG TACCAGTGCCCTATCCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MAQPSHALPSPIDAASVPEVINHTQWPSQYFQHVDPHGDIFHVMVSRTSYSMLDLEQTDKGMVPRLLPPQEQVPLCQADQ FQGEVNETSTVQESDFAPYKPKCDVLLVNATAHSPTGQPMQRWPVGFRFGDIEKRFHVTGPRRYARSLTTLGTLQLTEPE PAKHVPLRYELAYGGPNIIRQERLLQAYADGEIGSLTEQQRAQARKAHADLPAFFLANPIGCGRLPDAIPDAEAALATFS AVDAAQANATALRPAPQIEAFEMPYNGQRDYPVIGVGPVGRWWTPRVALAGTHDEAWKKTQWPKSPRDHDYRYWNCAPED QQIDYPQGGEEIVLVHFTSTVHHSGPYRFLLPRQDLQLLVRLHVGVLMFAPMNIDTVILDMGTGILSIVRRAVVSAKTDV RQLELGTWPAGTGVQLDEAMQQAAQANRKSKGTGSHGQ
Sequences:
>Translated_438_residues MAQPSHALPSPIDAASVPEVINHTQWPSQYFQHVDPHGDIFHVMVSRTSYSMLDLEQTDKGMVPRLLPPQEQVPLCQADQ FQGEVNETSTVQESDFAPYKPKCDVLLVNATAHSPTGQPMQRWPVGFRFGDIEKRFHVTGPRRYARSLTTLGTLQLTEPE PAKHVPLRYELAYGGPNIIRQERLLQAYADGEIGSLTEQQRAQARKAHADLPAFFLANPIGCGRLPDAIPDAEAALATFS AVDAAQANATALRPAPQIEAFEMPYNGQRDYPVIGVGPVGRWWTPRVALAGTHDEAWKKTQWPKSPRDHDYRYWNCAPED QQIDYPQGGEEIVLVHFTSTVHHSGPYRFLLPRQDLQLLVRLHVGVLMFAPMNIDTVILDMGTGILSIVRRAVVSAKTDV RQLELGTWPAGTGVQLDEAMQQAAQANRKSKGTGSHGQ >Mature_437_residues AQPSHALPSPIDAASVPEVINHTQWPSQYFQHVDPHGDIFHVMVSRTSYSMLDLEQTDKGMVPRLLPPQEQVPLCQADQF QGEVNETSTVQESDFAPYKPKCDVLLVNATAHSPTGQPMQRWPVGFRFGDIEKRFHVTGPRRYARSLTTLGTLQLTEPEP AKHVPLRYELAYGGPNIIRQERLLQAYADGEIGSLTEQQRAQARKAHADLPAFFLANPIGCGRLPDAIPDAEAALATFSA VDAAQANATALRPAPQIEAFEMPYNGQRDYPVIGVGPVGRWWTPRVALAGTHDEAWKKTQWPKSPRDHDYRYWNCAPEDQ QIDYPQGGEEIVLVHFTSTVHHSGPYRFLLPRQDLQLLVRLHVGVLMFAPMNIDTVILDMGTGILSIVRRAVVSAKTDVR QLELGTWPAGTGVQLDEAMQQAAQANRKSKGTGSHGQ
Specific function: Unknown
COG id: COG5351
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48606; Mature: 48475
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPSHALPSPIDAASVPEVINHTQWPSQYFQHVDPHGDIFHVMVSRTSYSMLDLEQTDK CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCC GMVPRLLPPQEQVPLCQADQFQGEVNETSTVQESDFAPYKPKCDVLLVNATAHSPTGQPM CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH QRWPVGFRFGDIEKRFHVTGPRRYARSLTTLGTLQLTEPEPAKHVPLRYELAYGGPNIIR HHCCCCEEECCCCCEEECCCHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEECCCHHHHH QERLLQAYADGEIGSLTEQQRAQARKAHADLPAFFLANPIGCGRLPDAIPDAEAALATFS HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHH AVDAAQANATALRPAPQIEAFEMPYNGQRDYPVIGVGPVGRWWTPRVALAGTHDEAWKKT HHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHC QWPKSPRDHDYRYWNCAPEDQQIDYPQGGEEIVLVHFTSTVHHSGPYRFLLPRQDLQLLV CCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEHCCCCCEEEECCHHHHHHHH RLHVGVLMFAPMNIDTVILDMGTGILSIVRRAVVSAKTDVRQLELGTWPAGTGVQLDEAM HHHHHHHEECCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCHHHHH QQAAQANRKSKGTGSHGQ HHHHHHHCCCCCCCCCCC >Mature Secondary Structure AQPSHALPSPIDAASVPEVINHTQWPSQYFQHVDPHGDIFHVMVSRTSYSMLDLEQTDK CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCC GMVPRLLPPQEQVPLCQADQFQGEVNETSTVQESDFAPYKPKCDVLLVNATAHSPTGQPM CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH QRWPVGFRFGDIEKRFHVTGPRRYARSLTTLGTLQLTEPEPAKHVPLRYELAYGGPNIIR HHCCCCEEECCCCCEEECCCHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEECCCHHHHH QERLLQAYADGEIGSLTEQQRAQARKAHADLPAFFLANPIGCGRLPDAIPDAEAALATFS HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHH AVDAAQANATALRPAPQIEAFEMPYNGQRDYPVIGVGPVGRWWTPRVALAGTHDEAWKKT HHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHC QWPKSPRDHDYRYWNCAPEDQQIDYPQGGEEIVLVHFTSTVHHSGPYRFLLPRQDLQLLV CCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEHCCCCCEEEECCHHHHHHHH RLHVGVLMFAPMNIDTVILDMGTGILSIVRRAVVSAKTDVRQLELGTWPAGTGVQLDEAM HHHHHHHEECCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCHHHHH QQAAQANRKSKGTGSHGQ HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA