| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610805
Identifier: 120610805
GI number: 120610805
Start: 2343632
End: 2343991
Strand: Direct
Name: 120610805
Synonym: Aave_2129
Alternate gene names: NA
Gene position: 2343632-2343991 (Clockwise)
Preceding gene: 120610804
Following gene: 120610806
Centisome position: 43.78
GC content: 56.11
Gene sequence:
>360_bases ATGGCCAATGAAAACATTGTCGCCAAGGACGGCCGTTTCCGAATCGTCTGCCTCGCGCCAGATGTGTGCTTAACGCCCAG CAAGAACGGCGTACCAGTGCCCTATCCCATTACCCACCAGTTGGACCAAAGCCAGCACTGCTCGCCCAATGTCTTCTTGC AGGGAAAGCCGGTTTATCTGCACAACCAGAGTTACGTGGACAACGTGATGGGGGACGAGCCCGGCCAAGGCAAGGGAGTG GTCAGCCAGACCAACGTCTTCATCAGCCATGACATTGACCACAGCAAATCCGTGTATGTCAACGGACGGGCCATCGTGCG CACGGCCGACAAAATGTGGATGAACTGGAAGAAGCCGTAG
Upstream 100 bases:
>100_bases CTGGAACTGGGCACATGGCCTGCGGGCACAGGCGTACAACTCGATGAGGCCATGCAGCAAGCCGCGCAGGCCAACCGAAA AAGCAAAGGGACCGGTAGCC
Downstream 100 bases:
>100_bases CATCCCATGGCGACGAAGAGACCTCGGCCGCCAGAGGCCCAAACGCGCAACGCGCGTGTCAAACCCAATGACTACCCCTC ACCGGGGCCCATTGGCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MANENIVAKDGRFRIVCLAPDVCLTPSKNGVPVPYPITHQLDQSQHCSPNVFLQGKPVYLHNQSYVDNVMGDEPGQGKGV VSQTNVFISHDIDHSKSVYVNGRAIVRTADKMWMNWKKP
Sequences:
>Translated_119_residues MANENIVAKDGRFRIVCLAPDVCLTPSKNGVPVPYPITHQLDQSQHCSPNVFLQGKPVYLHNQSYVDNVMGDEPGQGKGV VSQTNVFISHDIDHSKSVYVNGRAIVRTADKMWMNWKKP >Mature_118_residues ANENIVAKDGRFRIVCLAPDVCLTPSKNGVPVPYPITHQLDQSQHCSPNVFLQGKPVYLHNQSYVDNVMGDEPGQGKGVV SQTNVFISHDIDHSKSVYVNGRAIVRTADKMWMNWKKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13276; Mature: 13145
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANENIVAKDGRFRIVCLAPDVCLTPSKNGVPVPYPITHQLDQSQHCSPNVFLQGKPVYL CCCCCEEECCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEE HNQSYVDNVMGDEPGQGKGVVSQTNVFISHDIDHSKSVYVNGRAIVRTADKMWMNWKKP ECCCHHHHHCCCCCCCCCCEEEECEEEEEECCCCCCEEEECCEEEEEECCHHEEECCCC >Mature Secondary Structure ANENIVAKDGRFRIVCLAPDVCLTPSKNGVPVPYPITHQLDQSQHCSPNVFLQGKPVYL CCCCEEECCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEE HNQSYVDNVMGDEPGQGKGVVSQTNVFISHDIDHSKSVYVNGRAIVRTADKMWMNWKKP ECCCHHHHHCCCCCCCCCCEEEECEEEEEECCCCCCEEEECCEEEEEECCHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA