| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610368
Identifier: 120610368
GI number: 120610368
Start: 1843878
End: 1844177
Strand: Reverse
Name: 120610368
Synonym: Aave_1685
Alternate gene names: NA
Gene position: 1844177-1843878 (Counterclockwise)
Preceding gene: 120610369
Following gene: 120610367
Centisome position: 34.45
GC content: 65.0
Gene sequence:
>300_bases TTGGGGCGCATCCACGCGGCTTTTTCTTCCCCTCCCTCACCGGCCGGCAGCCGGCACTCGATCATCATGAGCCCCAAAGA AATCCAGGTCGGAAAAACCTATGTGAACCGCGGTCAGGGCCGCACGCGCCGCACGGTTATCGCCATCGGCCCGAAACATG TGCCGCGCTGCTGGCACGGCTGGACGAAGCCTCCAGCGGGCACACCGGGTGTGCTCTTCGAGCAGAACGGCCGGCGCGAA AACCTCTACCTCTCGAGCTTCGCTACCTGGGCTGGCGAGGAAGCCCCCAACGAGGGCTGA
Upstream 100 bases:
>100_bases CACCCCGCTCTCTTTGGAGGGCAAAGACACAAGAGCCCTCACGTAGAGGGCGTTTCTGCTTTCCAGCCGCGCGCCCCGTC TCCTCCCCCTCCCTCTCTTC
Downstream 100 bases:
>100_bases CACACATTTCCGGCGTCCTGCTCAGGGCCGCCTTTCACCGCGCCGGGGAGTTCTCCTCCTCCCTCCCTCTCTTCCCCCGG TACGCCCCGATGGGGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MGRIHAAFSSPPSPAGSRHSIIMSPKEIQVGKTYVNRGQGRTRRTVIAIGPKHVPRCWHGWTKPPAGTPGVLFEQNGRRE NLYLSSFATWAGEEAPNEG
Sequences:
>Translated_99_residues MGRIHAAFSSPPSPAGSRHSIIMSPKEIQVGKTYVNRGQGRTRRTVIAIGPKHVPRCWHGWTKPPAGTPGVLFEQNGRRE NLYLSSFATWAGEEAPNEG >Mature_98_residues GRIHAAFSSPPSPAGSRHSIIMSPKEIQVGKTYVNRGQGRTRRTVIAIGPKHVPRCWHGWTKPPAGTPGVLFEQNGRREN LYLSSFATWAGEEAPNEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10834; Mature: 10703
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRIHAAFSSPPSPAGSRHSIIMSPKEIQVGKTYVNRGQGRTRRTVIAIGPKHVPRCWHG CCEECCCCCCCCCCCCCCCEEEECCCEEECCHHHHHCCCCCCCEEEEEECCCCCCCCCCC WTKPPAGTPGVLFEQNGRRENLYLSSFATWAGEEAPNEG CCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure GRIHAAFSSPPSPAGSRHSIIMSPKEIQVGKTYVNRGQGRTRRTVIAIGPKHVPRCWHG CEECCCCCCCCCCCCCCCEEEECCCEEECCHHHHHCCCCCCCEEEEEECCCCCCCCCCC WTKPPAGTPGVLFEQNGRRENLYLSSFATWAGEEAPNEG CCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA