| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610367
Identifier: 120610367
GI number: 120610367
Start: 1840903
End: 1843410
Strand: Reverse
Name: 120610367
Synonym: Aave_1684
Alternate gene names: NA
Gene position: 1843410-1840903 (Counterclockwise)
Preceding gene: 120610368
Following gene: 120610366
Centisome position: 34.44
GC content: 66.03
Gene sequence:
>2508_bases ATGACCGATCCCTACCTGGACTTCCTGCGCAAGAAGATCAAGCTCGCCAGCTTCGCCGGCTTCGACGTGGACCCCGCGGA GGTGAACCCGAAGCTGAAGCCCCACACCCGCGACATCGTGCGCTGGGCGGCCAAGGGCGGCTGCCGGGCTATCTTCGCGA GCTTCGGCCTGCACAAGACCGTGACGGCGCTGGAACTGATGCGCCTGGTGGGCACGCGCCGGCCCGGCATTCGCGGCATC GTCGCGCCGCTGGGCGTGCGCCACGAGTTCATCGGCCAGGCCGCGGAGCACTTTCATGGTGCCCACGCCATCGACGTGCG CTTCGTCCGCCGGGACAGCGAGATCGACGATGAGCGCACCATCTACCTCACCAACTACGAGGCCATCCGCGAGGGCAACA TCAGCCCCGCGCGGTGGATCGCATCCAACCTGGACGAGGCGGATGTGCTGCGCAGCTACGGCAGCAAGACCTACCAGGAG TTCCTGCCCGCCTTCGCGCCGGTGGAGTTCAAGTTCGTGCAGACCGCCACGCCCAGCCCGAACCGGTACAAGGAGCTGAT CCACTACGCCGGCTACCTGGGGGTGATGGACACGGGCCAAGCCCTGACCCGGTTCTTCCAGCGCGACAGCGAGCAGGCCG GCAACCTCACCCTGTACCCTCACAAGGAAAAGGAATTCTGGCTGTGGGTGGCGTCCTGGGCAGTCTTCATCCAGCGCCCG AGCGATCTGGGCCACTCCGATGCAGGCTATGCGCTGCCGGCGCTGGACGTGCGTTATCACGAGGTGCCGAGCAACTACGA GACGGCCGGCGCCGAGAAGAGCGGCCAGGGCCTACTGATCCCTGACGTGGCCCTGGGCCTGTCGGCCGCCGCGGCCGAGA AGCGGGCCAGCATGCCCGCGCGGATCGACAAGGTGCGCGAGATCGTGGATGCGGATCCTCGGGACAGCTTCGTTATCTGG CACGACCTCGAAGACGAGCGCCACGCCCTGCAGGATGCGATCCCGGAGGCCGTGAGCGTGTGGGGCACGCAGGATCTGGA TGAGCGAGAGGACCGCATCGTGGGCTTCGGCGATGGCGCCTTCCGGCTGTTGTCCACCAAGCCGGTCATCGCCGGCGCGG GCTGCAATTTCCAGCGGCACTGCCACCGCGAGGTGTTCGCTGGCATCGGCTTCAAGTTCCGCGATTTCATTCAGGCCATC CACCGCGTGCACCGCTTCGGGCAGACCAAGCCGGTGCGAATCGACATCATCCACACCGAGGCCGAACGGGAGGTGTTGCG CAAGATGCAGGAGAAGTGGCGGCAGCACGACGAAGTGCAGGCCCAGATGAGTAACCTGATCCGCACCTACGGCTTGGACC AGCTGGCCATGCACGAGACGCTGGCCAGGACGATCGGTGTGAAGCGGCGGGTGGTCAAGAGCGACCTCTTCGAGGTGGCC CACAACGACTGCGTGCTGGAGGCTCGCGAGCAGCCGGAGAACTCGGTGGACCTGATCGTGACCAGCATCCCGTTCGCCAA CCACTACGAGTACAGCCCCAGCTATAACGACTTCGGGCACACGGAGGGCAATGCGCACTTCTGGGAGCAGATGGACTTCT TGACGCCGGAGCTGTACCGGATCCTGAAGCCCGGGCGGATCGCGGCGATCCATGTGAAAGACCGGGTGCTGTTCGGGAAC GTGACCGGTCTGGGACGGCCCAGCATGGACTACTTCCACGAGGAGGCGTCCATGCACCTGCGCAAGCACGGCTTCCACAA GCTGGCCATCGTGACCATCACCACCGATGTGGTGCGAGAGAACAACCAGACCTACCGCCTGACCTACTCGGAGATGTGCA AGGACGGCACCAAGATGGGCACGGGCTGCAGCGAGTACCTGCTGGTGTTCTTCAAGCCCCAGACCGACCTCTCGCGCGGG TATGCCGATGTGCCGGTGGCCCGGGCCAAGGCGGACTACAGCCTCGGCCGTTGGCAGATCGACGCGCATGCCTACTGGCG CTCGAGCGGCGACCGGCTGCTGGCTGCCGAGGAGATTGCGGCGATGGGCCCGGGCAAGCTGGCCAAGTTCTTCACGGACG ACAGCCTGCGGCGTATTTACGACTACCGGCGCCACGTTGCCATCGGCGAGCAGCTGGAGGAGCGCGGCGCCCTGCCCCGC GAATTCGCCTGCCTGCAGCCCGGGAGCCCCGACCCGAACGTGTGGACCGACATCGCGCGCATGCGAACCCTGAACGGGGA ACAAGCCAACCGGTCCGTCGAGAAGCACATCTGCCCGCTGCAGTTCGACATCGTGGACCGCGCGATCGAACGCTGGAGCA TGCGTGGCGAGAAGGTATATGACCCGTTCCACGGGCTCGGCACGGTCGGCGTGCGCGCCATCAAGCTCGGCCGGCGCGCC GGCGGGAGTGAACTGAACCCGGGCTACTTCGCCGACCAGGTGCACTACCTACAGGCGGCCGAGCGTGAGGCCAGCATGCC GTCGCTCTTTGACACCCTGGAGGCCTGA
Upstream 100 bases:
>100_bases GACGCGGCCCACCACCTTCCCAGCCGGGCCGGGGGCTCTCCTCCCTCCCTCTCTCTCTTCCCCTTGCAGCCCTTCGGTGG GCATTTATTTCGCCTTGAAC
Downstream 100 bases:
>100_bases CCCGCCTCGCCGCTCCGAGCCCGCCGCGTGCGGGCTCTTTTCGTTTCAGGAGAACCCCATGGACATCCACCACCCCGCCA TGCGCGACACCACGCAAGCC
Product: DNA methylase N-4/N-6 domain-containing protein
Products: NA
Alternate protein names: DNA Methylase N-4/N-6 Domain-Containing Protein; Helicase-Like; Helicase Domain Protein; Helicase Domain-Containing Protein
Number of amino acids: Translated: 835; Mature: 834
Protein sequence:
>835_residues MTDPYLDFLRKKIKLASFAGFDVDPAEVNPKLKPHTRDIVRWAAKGGCRAIFASFGLHKTVTALELMRLVGTRRPGIRGI VAPLGVRHEFIGQAAEHFHGAHAIDVRFVRRDSEIDDERTIYLTNYEAIREGNISPARWIASNLDEADVLRSYGSKTYQE FLPAFAPVEFKFVQTATPSPNRYKELIHYAGYLGVMDTGQALTRFFQRDSEQAGNLTLYPHKEKEFWLWVASWAVFIQRP SDLGHSDAGYALPALDVRYHEVPSNYETAGAEKSGQGLLIPDVALGLSAAAAEKRASMPARIDKVREIVDADPRDSFVIW HDLEDERHALQDAIPEAVSVWGTQDLDEREDRIVGFGDGAFRLLSTKPVIAGAGCNFQRHCHREVFAGIGFKFRDFIQAI HRVHRFGQTKPVRIDIIHTEAEREVLRKMQEKWRQHDEVQAQMSNLIRTYGLDQLAMHETLARTIGVKRRVVKSDLFEVA HNDCVLEAREQPENSVDLIVTSIPFANHYEYSPSYNDFGHTEGNAHFWEQMDFLTPELYRILKPGRIAAIHVKDRVLFGN VTGLGRPSMDYFHEEASMHLRKHGFHKLAIVTITTDVVRENNQTYRLTYSEMCKDGTKMGTGCSEYLLVFFKPQTDLSRG YADVPVARAKADYSLGRWQIDAHAYWRSSGDRLLAAEEIAAMGPGKLAKFFTDDSLRRIYDYRRHVAIGEQLEERGALPR EFACLQPGSPDPNVWTDIARMRTLNGEQANRSVEKHICPLQFDIVDRAIERWSMRGEKVYDPFHGLGTVGVRAIKLGRRA GGSELNPGYFADQVHYLQAAEREASMPSLFDTLEA
Sequences:
>Translated_835_residues MTDPYLDFLRKKIKLASFAGFDVDPAEVNPKLKPHTRDIVRWAAKGGCRAIFASFGLHKTVTALELMRLVGTRRPGIRGI VAPLGVRHEFIGQAAEHFHGAHAIDVRFVRRDSEIDDERTIYLTNYEAIREGNISPARWIASNLDEADVLRSYGSKTYQE FLPAFAPVEFKFVQTATPSPNRYKELIHYAGYLGVMDTGQALTRFFQRDSEQAGNLTLYPHKEKEFWLWVASWAVFIQRP SDLGHSDAGYALPALDVRYHEVPSNYETAGAEKSGQGLLIPDVALGLSAAAAEKRASMPARIDKVREIVDADPRDSFVIW HDLEDERHALQDAIPEAVSVWGTQDLDEREDRIVGFGDGAFRLLSTKPVIAGAGCNFQRHCHREVFAGIGFKFRDFIQAI HRVHRFGQTKPVRIDIIHTEAEREVLRKMQEKWRQHDEVQAQMSNLIRTYGLDQLAMHETLARTIGVKRRVVKSDLFEVA HNDCVLEAREQPENSVDLIVTSIPFANHYEYSPSYNDFGHTEGNAHFWEQMDFLTPELYRILKPGRIAAIHVKDRVLFGN VTGLGRPSMDYFHEEASMHLRKHGFHKLAIVTITTDVVRENNQTYRLTYSEMCKDGTKMGTGCSEYLLVFFKPQTDLSRG YADVPVARAKADYSLGRWQIDAHAYWRSSGDRLLAAEEIAAMGPGKLAKFFTDDSLRRIYDYRRHVAIGEQLEERGALPR EFACLQPGSPDPNVWTDIARMRTLNGEQANRSVEKHICPLQFDIVDRAIERWSMRGEKVYDPFHGLGTVGVRAIKLGRRA GGSELNPGYFADQVHYLQAAEREASMPSLFDTLEA >Mature_834_residues TDPYLDFLRKKIKLASFAGFDVDPAEVNPKLKPHTRDIVRWAAKGGCRAIFASFGLHKTVTALELMRLVGTRRPGIRGIV APLGVRHEFIGQAAEHFHGAHAIDVRFVRRDSEIDDERTIYLTNYEAIREGNISPARWIASNLDEADVLRSYGSKTYQEF LPAFAPVEFKFVQTATPSPNRYKELIHYAGYLGVMDTGQALTRFFQRDSEQAGNLTLYPHKEKEFWLWVASWAVFIQRPS DLGHSDAGYALPALDVRYHEVPSNYETAGAEKSGQGLLIPDVALGLSAAAAEKRASMPARIDKVREIVDADPRDSFVIWH DLEDERHALQDAIPEAVSVWGTQDLDEREDRIVGFGDGAFRLLSTKPVIAGAGCNFQRHCHREVFAGIGFKFRDFIQAIH RVHRFGQTKPVRIDIIHTEAEREVLRKMQEKWRQHDEVQAQMSNLIRTYGLDQLAMHETLARTIGVKRRVVKSDLFEVAH NDCVLEAREQPENSVDLIVTSIPFANHYEYSPSYNDFGHTEGNAHFWEQMDFLTPELYRILKPGRIAAIHVKDRVLFGNV TGLGRPSMDYFHEEASMHLRKHGFHKLAIVTITTDVVRENNQTYRLTYSEMCKDGTKMGTGCSEYLLVFFKPQTDLSRGY ADVPVARAKADYSLGRWQIDAHAYWRSSGDRLLAAEEIAAMGPGKLAKFFTDDSLRRIYDYRRHVAIGEQLEERGALPRE FACLQPGSPDPNVWTDIARMRTLNGEQANRSVEKHICPLQFDIVDRAIERWSMRGEKVYDPFHGLGTVGVRAIKLGRRAG GSELNPGYFADQVHYLQAAEREASMPSLFDTLEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94734; Mature: 94603
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPYLDFLRKKIKLASFAGFDVDPAEVNPKLKPHTRDIVRWAAKGGCRAIFASFGLHKT CCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCHHHH VTALELMRLVGTRRPGIRGIVAPLGVRHEFIGQAAEHFHGAHAIDVRFVRRDSEIDDERT HHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCE IYLTNYEAIREGNISPARWIASNLDEADVLRSYGSKTYQEFLPAFAPVEFKFVQTATPSP EEEECHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCC NRYKELIHYAGYLGVMDTGQALTRFFQRDSEQAGNLTLYPHKEKEFWLWVASWAVFIQRP HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEHHHHHHHHCCC SDLGHSDAGYALPALDVRYHEVPSNYETAGAEKSGQGLLIPDVALGLSAAAAEKRASMPA CCCCCCCCCCCCCEECCEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCH RIDKVREIVDADPRDSFVIWHDLEDERHALQDAIPEAVSVWGTQDLDEREDRIVGFGDGA HHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC FRLLSTKPVIAGAGCNFQRHCHREVFAGIGFKFRDFIQAIHRVHRFGQTKPVRIDIIHTE EEEEECCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECH AEREVLRKMQEKWRQHDEVQAQMSNLIRTYGLDQLAMHETLARTIGVKRRVVKSDLFEVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNDCVLEAREQPENSVDLIVTSIPFANHYEYSPSYNDFGHTEGNAHFWEQMDFLTPELYR CCCCEEEHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHH ILKPGRIAAIHVKDRVLFGNVTGLGRPSMDYFHEEASMHLRKHGFHKLAIVTITTDVVRE HCCCCCEEEEEEECEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHC NNQTYRLTYSEMCKDGTKMGTGCSEYLLVFFKPQTDLSRGYADVPVARAKADYSLGRWQI CCCEEEEEHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCHHHHCCCCCCCCEEE DAHAYWRSSGDRLLAAEEIAAMGPGKLAKFFTDDSLRRIYDYRRHVAIGEQLEERGALPR ECHHHCCCCCCEEEEHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC EFACLQPGSPDPNVWTDIARMRTLNGEQANRSVEKHICPLQFDIVDRAIERWSMRGEKVY CEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC DPFHGLGTVGVRAIKLGRRAGGSELNPGYFADQVHYLQAAEREASMPSLFDTLEA CCHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure TDPYLDFLRKKIKLASFAGFDVDPAEVNPKLKPHTRDIVRWAAKGGCRAIFASFGLHKT CCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCHHHH VTALELMRLVGTRRPGIRGIVAPLGVRHEFIGQAAEHFHGAHAIDVRFVRRDSEIDDERT HHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCE IYLTNYEAIREGNISPARWIASNLDEADVLRSYGSKTYQEFLPAFAPVEFKFVQTATPSP EEEECHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCC NRYKELIHYAGYLGVMDTGQALTRFFQRDSEQAGNLTLYPHKEKEFWLWVASWAVFIQRP HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEHHHHHHHHCCC SDLGHSDAGYALPALDVRYHEVPSNYETAGAEKSGQGLLIPDVALGLSAAAAEKRASMPA CCCCCCCCCCCCCEECCEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCH RIDKVREIVDADPRDSFVIWHDLEDERHALQDAIPEAVSVWGTQDLDEREDRIVGFGDGA HHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC FRLLSTKPVIAGAGCNFQRHCHREVFAGIGFKFRDFIQAIHRVHRFGQTKPVRIDIIHTE EEEEECCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECH AEREVLRKMQEKWRQHDEVQAQMSNLIRTYGLDQLAMHETLARTIGVKRRVVKSDLFEVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNDCVLEAREQPENSVDLIVTSIPFANHYEYSPSYNDFGHTEGNAHFWEQMDFLTPELYR CCCCEEEHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHH ILKPGRIAAIHVKDRVLFGNVTGLGRPSMDYFHEEASMHLRKHGFHKLAIVTITTDVVRE HCCCCCEEEEEEECEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHC NNQTYRLTYSEMCKDGTKMGTGCSEYLLVFFKPQTDLSRGYADVPVARAKADYSLGRWQI CCCEEEEEHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCHHHHCCCCCCCCEEE DAHAYWRSSGDRLLAAEEIAAMGPGKLAKFFTDDSLRRIYDYRRHVAIGEQLEERGALPR ECHHHCCCCCCEEEEHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC EFACLQPGSPDPNVWTDIARMRTLNGEQANRSVEKHICPLQFDIVDRAIERWSMRGEKVY CEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC DPFHGLGTVGVRAIKLGRRAGGSELNPGYFADQVHYLQAAEREASMPSLFDTLEA CCHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA