| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610325
Identifier: 120610325
GI number: 120610325
Start: 1800348
End: 1800806
Strand: Reverse
Name: 120610325
Synonym: Aave_1642
Alternate gene names: NA
Gene position: 1800806-1800348 (Counterclockwise)
Preceding gene: 120610326
Following gene: 120610319
Centisome position: 33.64
GC content: 64.71
Gene sequence:
>459_bases ATGAGCACAGGCTTGTATGTAGAGCTCACCGAATTGCGCCGCAGTGGCATGCGGTTGCGCCCCGAAGAGTGGCCCGCGCC GGTAGATGGCGAACTCCGGATGTACTACTGGGACGGCAGGAGAAACAGCAGCCGGCGCACGCTGCGCGAGGTCACGCTGT GGGGGTACTGGGGCACGACAGAGCAGCCAATTCGGAGGATGACCGACCCGCTGCTTATCGACATCTTGGGCGATGCCATG CTGCTCCAGGGCCAGGTGCTCGGCTCCGTGGAGGGACGACTGTACGAGCATTTCCAGCTGTGGCTCGTGCGGCCGAAGCG ACACGGCGCTCCGCCGCTTCCTCCATTCGATCATGCGGCATGGGCAGGCAGCCTGCCACAGGTTCCACCGCCTCGGGAAG ACCGCTCTGTGAGCGAAAAATGGCTGCAGGCGCACCCCGAGGCGAAAGGGCCGCGATGA
Upstream 100 bases:
>100_bases CCCAGATCCACAGGTGGGCCCGCGCGGTTTCCATCGCGAGGCGGATCGCGCTGCGCGGCCTGGGCCAGGTTGAGGGCGTA TTTTTTGTGGTGCGCACGCC
Downstream 100 bases:
>100_bases GCGACGGAGAAGCAAGGATGGTAGAGATGGCCACCGCCGCCGGGCTACTCAAGCACGGAGAACCCGTCCCCGAGGAACTG CTGGCATTTGCATTCCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSTGLYVELTELRRSGMRLRPEEWPAPVDGELRMYYWDGRRNSSRRTLREVTLWGYWGTTEQPIRRMTDPLLIDILGDAM LLQGQVLGSVEGRLYEHFQLWLVRPKRHGAPPLPPFDHAAWAGSLPQVPPPREDRSVSEKWLQAHPEAKGPR
Sequences:
>Translated_152_residues MSTGLYVELTELRRSGMRLRPEEWPAPVDGELRMYYWDGRRNSSRRTLREVTLWGYWGTTEQPIRRMTDPLLIDILGDAM LLQGQVLGSVEGRLYEHFQLWLVRPKRHGAPPLPPFDHAAWAGSLPQVPPPREDRSVSEKWLQAHPEAKGPR >Mature_151_residues STGLYVELTELRRSGMRLRPEEWPAPVDGELRMYYWDGRRNSSRRTLREVTLWGYWGTTEQPIRRMTDPLLIDILGDAML LQGQVLGSVEGRLYEHFQLWLVRPKRHGAPPLPPFDHAAWAGSLPQVPPPREDRSVSEKWLQAHPEAKGPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17621; Mature: 17490
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGLYVELTELRRSGMRLRPEEWPAPVDGELRMYYWDGRRNSSRRTLREVTLWGYWGTT CCCCEEEEHHHHHHCCCCCCHHHCCCCCCCCEEEEEECCCCCCHHHHHHHEEEEEECCCC EQPIRRMTDPLLIDILGDAMLLQGQVLGSVEGRLYEHFQLWLVRPKRHGAPPLPPFDHAA HHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCC WAGSLPQVPPPREDRSVSEKWLQAHPEAKGPR CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure STGLYVELTELRRSGMRLRPEEWPAPVDGELRMYYWDGRRNSSRRTLREVTLWGYWGTT CCCEEEEHHHHHHCCCCCCHHHCCCCCCCCEEEEEECCCCCCHHHHHHHEEEEEECCCC EQPIRRMTDPLLIDILGDAMLLQGQVLGSVEGRLYEHFQLWLVRPKRHGAPPLPPFDHAA HHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCC WAGSLPQVPPPREDRSVSEKWLQAHPEAKGPR CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA