| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610319
Identifier: 120610319
GI number: 120610319
Start: 1797073
End: 1797597
Strand: Reverse
Name: 120610319
Synonym: Aave_1636
Alternate gene names: NA
Gene position: 1797597-1797073 (Counterclockwise)
Preceding gene: 120610325
Following gene: 120610292
Centisome position: 33.58
GC content: 75.05
Gene sequence:
>525_bases GTGGTCGGCGGCGCGGCCGGCAGCTGCGCGCCGCGCCGACTCCGCCTCCAAGAGGCGCTTGTCGGCCAGCGTGCGCAGCT CGCCTACCGCGGTGCTGCAGGCCTCGGCCGCACCGCGCACGCCCGCCAGTTCTTGGCCCTTGGCGGACACCGCAGCGCGC GCCTCGGTCGCATCGTCGCGCTCGCCAAGGTATGCCCAGCCGAGCAGCCCATTGGCCGCCAGGCTGACCAGCAGGACGAT TTGCCCGGGCGTCATGGCTGCCCCCCTGCGCACGCGGCGTACATGCGGACGATGGTCTGCGTGTGCATGCGGCGCTCCAG GCCGGATGCCCCGGCGCGCAGCTCGGGCAGCGGCGGGCAGTCACGGCGCGCCACCGCGGGCGCGGCCGGCTCTGCCTGGG CGGCCTGCGGCTCAGGCGGCGCGGTGCTACAGCCGGCCAGCAGCAGGGCCGCGATGATTGGGGTGCGGATCATCGGGGGG CCTCCTTGCGGATGCGCTCGTTGGCGCGCTGGATGGTGGTGTTGA
Upstream 100 bases:
>100_bases CCCTCCCCTGCAGCCAGGCGTCCACCCGCACCTGGGCGCTGGCGCATGCATCGCCCGGCACGGGGGCGGGCATGGACAGG ATCTGATCCGCCTTTCGGTT
Downstream 100 bases:
>100_bases TGGCCTTGCGCTCGTGCTCAGGCACGGCGGCCGGCACGCCCGCGGCCTTGGCCGCTTTGCCGGCCGTGGCCGCAGCTGCT TGCGCGGTTTCTGCGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MVGGAAGSCAPRRLRLQEALVGQRAQLAYRGAAGLGRTAHARQFLALGGHRSARLGRIVALAKVCPAEQPIGRQADQQDD LPGRHGCPPAHAAYMRTMVCVCMRRSRPDAPARSSGSGGQSRRATAGAAGSAWAACGSGGAVLQPASSRAAMIGVRIIGG PPCGCARWRAGWWC
Sequences:
>Translated_174_residues MVGGAAGSCAPRRLRLQEALVGQRAQLAYRGAAGLGRTAHARQFLALGGHRSARLGRIVALAKVCPAEQPIGRQADQQDD LPGRHGCPPAHAAYMRTMVCVCMRRSRPDAPARSSGSGGQSRRATAGAAGSAWAACGSGGAVLQPASSRAAMIGVRIIGG PPCGCARWRAGWWC >Mature_174_residues MVGGAAGSCAPRRLRLQEALVGQRAQLAYRGAAGLGRTAHARQFLALGGHRSARLGRIVALAKVCPAEQPIGRQADQQDD LPGRHGCPPAHAAYMRTMVCVCMRRSRPDAPARSSGSGGQSRRATAGAAGSAWAACGSGGAVLQPASSRAAMIGVRIIGG PPCGCARWRAGWWC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17923; Mature: 17923
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: PS00022 EGF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGGAAGSCAPRRLRLQEALVGQRAQLAYRGAAGLGRTAHARQFLALGGHRSARLGRIVA CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH LAKVCPAEQPIGRQADQQDDLPGRHGCPPAHAAYMRTMVCVCMRRSRPDAPARSSGSGGQ HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SRRATAGAAGSAWAACGSGGAVLQPASSRAAMIGVRIIGGPPCGCARWRAGWWC CCCCCCCCCCCCHHHCCCCCCEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MVGGAAGSCAPRRLRLQEALVGQRAQLAYRGAAGLGRTAHARQFLALGGHRSARLGRIVA CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH LAKVCPAEQPIGRQADQQDDLPGRHGCPPAHAAYMRTMVCVCMRRSRPDAPARSSGSGGQ HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SRRATAGAAGSAWAACGSGGAVLQPASSRAAMIGVRIIGGPPCGCARWRAGWWC CCCCCCCCCCCCHHHCCCCCCEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA