Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610232
Identifier: 120610232
GI number: 120610232
Start: 1712833
End: 1714347
Strand: Reverse
Name: 120610232
Synonym: Aave_1547
Alternate gene names: NA
Gene position: 1714347-1712833 (Counterclockwise)
Preceding gene: 120610233
Following gene: 120610221
Centisome position: 32.03
GC content: 64.49
Gene sequence:
>1515_bases ATGCACGCCCAGGAATCCCCGGCAGCCGCAGCAGGTACATCCGGCTCGCGGAATCTGGTCGCCGACCTGCAGGCGGAGCT GAGCCAGCGGTGGCCGGCACGCTTTTGCCACGTGGACGATTCAGCGCTCGTCCTGGATACGGTGCCATCCAGCGAGGACC GGCAGAAGCGGCTGATCCACCTGACGATCGAATCGGCGGACCGGCTGGCCATCATGACCTCCTTCAGCATCCATCCGACC AAGGACCATGAACCCGGCCATGTCTCCGGCACCACGTTCGCCATGATGGAGGCGCTGGCACGGCGGCAGCACGACCCGGA CTTCACCTTCGTGCTCCTGTACAACGACAACAAGCTGCAACGGAATGCCGCGATCGCGGCAGTGGTGGGGCAGAACGTGA CGGCCAACATGTCGCTGCGCAACGAAAGCCGGGTTCCGGGCACCATCACATGGCCGTCGGTGGTCCGGGCCTACAACGCC ATGCAGGCGGACGACGGATTGAAGATCGGCACGTTGCGTGCCCGCGTGTATTTCGTGGCGGCCAAGGCCCGGGGCGCCGC CGGCTCCCACCACAACAAGTTCTGCATCAACGACCGCGGTGTGGCTGCCACCCTGGGCGCAAGCATCGCCAACAAAACCA AGGACGGATGGATGGACGGCGGCTGCATCGCCCTGTCGGCCCGCCTGGCCGGGAGCCAGCGCGACTATTTCCTCGATGAG CTGATGGGAGAACACGCGGTGCGCTGTGCGCGCCTGGTCTGCCAGGACGGGCTTGCCGTCATGGCCCCTGTGGAGCAGCC TGCCGCTGCGCTGGGCACGCTGAGGGACATCGCCGTGCGCTCGCCTTTCGATCCGGGAACCGGAGAAGCCGGCCAGCACC CCATGCACGCAGCGCTCGCCAGGGCTGGCATCGCGTTCACGGGGAACCGGCAGAAGGTGCTCTGGCTGCAGAATCCATCG AACGGCTACCGGAACATGTTCTCGGAAGGCGGAAGGATAGAAGGCAAGCCCATCGGCTTCGCCCTGGCGAAGATCTTCGC TAGTACAGGACCGGGCGATACGCTGGACATTGCCGGGAAGAAGCTGGGGACCGAGGCCTTTGGCCTCATCGGCGAAGCAC TCGCCAGGGGCTGCAACGTCAACATCCTGGTGGACCGCTCCAGCAGGGGGCTGGTGGATTTCGCGGCACGCAGGCTCTAC GGAGACAAGGCGAAACCGCCTGCAGGCCACCTCACGGTCAAACACTATGCGCCTGGCGAGTCTCTGGCGCACGAACTGCA GATCAACCTGCGCAGCGAAACGGTGCTGCACGCCAAGAACTATCTTCTCACCCGCAGTGACGGGTCCTGCATCGTCATGA CGGGCTCCTACAACCTGGACGGGCAATCGCATTACCGGTCCAACGAGAATCTGATGGTCTTCGAGACCAGCGATCCGACG TTGCGCCGCGCGCTGTTCGACGATATTTACCAGGGCAGTGACGGCGAAGCGAGTCACTACCCACCCAAGCGCTGA
Upstream 100 bases:
>100_bases GGCGAGAACCTGTGCGGCCCCCGCATCCCCCAGGAACGCCAGGCTCTCCCCCCCGTCGGCTGCGCCGGCAGATTCCGCCA GGCGCGCCGCCCGGGCTGGC
Downstream 100 bases:
>100_bases AGGCTGGTCGAACGGCCGTGCCCTCGTGTGCAGATCAGCGCATGCCACGGCAGGCCTGAAAGAGGGCATGCTGCGCGAGC GGATCCAGGACGCCGAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MHAQESPAAAAGTSGSRNLVADLQAELSQRWPARFCHVDDSALVLDTVPSSEDRQKRLIHLTIESADRLAIMTSFSIHPT KDHEPGHVSGTTFAMMEALARRQHDPDFTFVLLYNDNKLQRNAAIAAVVGQNVTANMSLRNESRVPGTITWPSVVRAYNA MQADDGLKIGTLRARVYFVAAKARGAAGSHHNKFCINDRGVAATLGASIANKTKDGWMDGGCIALSARLAGSQRDYFLDE LMGEHAVRCARLVCQDGLAVMAPVEQPAAALGTLRDIAVRSPFDPGTGEAGQHPMHAALARAGIAFTGNRQKVLWLQNPS NGYRNMFSEGGRIEGKPIGFALAKIFASTGPGDTLDIAGKKLGTEAFGLIGEALARGCNVNILVDRSSRGLVDFAARRLY GDKAKPPAGHLTVKHYAPGESLAHELQINLRSETVLHAKNYLLTRSDGSCIVMTGSYNLDGQSHYRSNENLMVFETSDPT LRRALFDDIYQGSDGEASHYPPKR
Sequences:
>Translated_504_residues MHAQESPAAAAGTSGSRNLVADLQAELSQRWPARFCHVDDSALVLDTVPSSEDRQKRLIHLTIESADRLAIMTSFSIHPT KDHEPGHVSGTTFAMMEALARRQHDPDFTFVLLYNDNKLQRNAAIAAVVGQNVTANMSLRNESRVPGTITWPSVVRAYNA MQADDGLKIGTLRARVYFVAAKARGAAGSHHNKFCINDRGVAATLGASIANKTKDGWMDGGCIALSARLAGSQRDYFLDE LMGEHAVRCARLVCQDGLAVMAPVEQPAAALGTLRDIAVRSPFDPGTGEAGQHPMHAALARAGIAFTGNRQKVLWLQNPS NGYRNMFSEGGRIEGKPIGFALAKIFASTGPGDTLDIAGKKLGTEAFGLIGEALARGCNVNILVDRSSRGLVDFAARRLY GDKAKPPAGHLTVKHYAPGESLAHELQINLRSETVLHAKNYLLTRSDGSCIVMTGSYNLDGQSHYRSNENLMVFETSDPT LRRALFDDIYQGSDGEASHYPPKR >Mature_504_residues MHAQESPAAAAGTSGSRNLVADLQAELSQRWPARFCHVDDSALVLDTVPSSEDRQKRLIHLTIESADRLAIMTSFSIHPT KDHEPGHVSGTTFAMMEALARRQHDPDFTFVLLYNDNKLQRNAAIAAVVGQNVTANMSLRNESRVPGTITWPSVVRAYNA MQADDGLKIGTLRARVYFVAAKARGAAGSHHNKFCINDRGVAATLGASIANKTKDGWMDGGCIALSARLAGSQRDYFLDE LMGEHAVRCARLVCQDGLAVMAPVEQPAAALGTLRDIAVRSPFDPGTGEAGQHPMHAALARAGIAFTGNRQKVLWLQNPS NGYRNMFSEGGRIEGKPIGFALAKIFASTGPGDTLDIAGKKLGTEAFGLIGEALARGCNVNILVDRSSRGLVDFAARRLY GDKAKPPAGHLTVKHYAPGESLAHELQINLRSETVLHAKNYLLTRSDGSCIVMTGSYNLDGQSHYRSNENLMVFETSDPT LRRALFDDIYQGSDGEASHYPPKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54444; Mature: 54444
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAQESPAAAAGTSGSRNLVADLQAELSQRWPARFCHVDDSALVLDTVPSSEDRQKRLIH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCEEEE LTIESADRLAIMTSFSIHPTKDHEPGHVSGTTFAMMEALARRQHDPDFTFVLLYNDNKLQ EEECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCC RNAAIAAVVGQNVTANMSLRNESRVPGTITWPSVVRAYNAMQADDGLKIGTLRARVYFVA CCCEEEEEECCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEEEEEEEEE AKARGAAGSHHNKFCINDRGVAATLGASIANKTKDGWMDGGCIALSARLAGSQRDYFLDE EECCCCCCCCCCEEEECCCCCEEHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHH LMGEHAVRCARLVCQDGLAVMAPVEQPAAALGTLRDIAVRSPFDPGTGEAGQHPMHAALA HHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH RAGIAFTGNRQKVLWLQNPSNGYRNMFSEGGRIEGKPIGFALAKIFASTGPGDTLDIAGK HCCEEEECCCEEEEEEECCCCHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCCEEECCCC KLGTEAFGLIGEALARGCNVNILVDRSSRGLVDFAARRLYGDKAKPPAGHLTVKHYAPGE CCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCH SLAHELQINLRSETVLHAKNYLLTRSDGSCIVMTGSYNLDGQSHYRSNENLMVFETSDPT HHHEEEEEEECCCEEEEECCEEEEECCCCEEEEECCCCCCCHHHCCCCCCEEEEECCCHH LRRALFDDIYQGSDGEASHYPPKR HHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MHAQESPAAAAGTSGSRNLVADLQAELSQRWPARFCHVDDSALVLDTVPSSEDRQKRLIH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCEEEE LTIESADRLAIMTSFSIHPTKDHEPGHVSGTTFAMMEALARRQHDPDFTFVLLYNDNKLQ EEECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCC RNAAIAAVVGQNVTANMSLRNESRVPGTITWPSVVRAYNAMQADDGLKIGTLRARVYFVA CCCEEEEEECCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEEEEEEEEE AKARGAAGSHHNKFCINDRGVAATLGASIANKTKDGWMDGGCIALSARLAGSQRDYFLDE EECCCCCCCCCCEEEECCCCCEEHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHH LMGEHAVRCARLVCQDGLAVMAPVEQPAAALGTLRDIAVRSPFDPGTGEAGQHPMHAALA HHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH RAGIAFTGNRQKVLWLQNPSNGYRNMFSEGGRIEGKPIGFALAKIFASTGPGDTLDIAGK HCCEEEECCCEEEEEEECCCCHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCCEEECCCC KLGTEAFGLIGEALARGCNVNILVDRSSRGLVDFAARRLYGDKAKPPAGHLTVKHYAPGE CCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCH SLAHELQINLRSETVLHAKNYLLTRSDGSCIVMTGSYNLDGQSHYRSNENLMVFETSDPT HHHEEEEEEECCCEEEEECCEEEEECCCCEEEEECCCCCCCHHHCCCCCCEEEEECCCHH LRRALFDDIYQGSDGEASHYPPKR HHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA