Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610221
Identifier: 120610221
GI number: 120610221
Start: 1701924
End: 1702172
Strand: Reverse
Name: 120610221
Synonym: Aave_1536
Alternate gene names: NA
Gene position: 1702172-1701924 (Counterclockwise)
Preceding gene: 120610232
Following gene: 120610220
Centisome position: 31.8
GC content: 71.89
Gene sequence:
>249_bases ATGGATTCACCCTCCCCCCTCGACCAGATCACCGAGCGCGTGGAGCGGCTGCTCGTGCGCCATGCCGAGCTGCAGCGCGC CAACGCCCTGCTCACCGCCCAGGTGGTCTCGCTCACGCAGGAGCGCGACTCGCTCCGGTCGCGCCTGAACACCGCCCGCA CGCGCATCGACGCGCTGCTGGAGCAACTGCCGCCCCCGCCGGACCATGTCCCGGCCACCCCGACCGACCTGCCCAAGGAG GCCGAATGA
Upstream 100 bases:
>100_bases GAACCGCGGTCTGTGAACCAGGCCGCAGGCACCAACGCAGCGGATTCTAGGACGTTTCGATACATATTCGCCCGCCCTGC CCCAACCCTACAATCCGGGC
Downstream 100 bases:
>100_bases ACCAGATCGAAGTGCAGATCATGCAGCAGAGCTACCGCCTCGCCTGTCCGGAAGGCCAGCAGGAACGGCTGCTGCAGGCG GTCGAGCGCGTGGACGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MDSPSPLDQITERVERLLVRHAELQRANALLTAQVVSLTQERDSLRSRLNTARTRIDALLEQLPPPPDHVPATPTDLPKE AE
Sequences:
>Translated_82_residues MDSPSPLDQITERVERLLVRHAELQRANALLTAQVVSLTQERDSLRSRLNTARTRIDALLEQLPPPPDHVPATPTDLPKE AE >Mature_82_residues MDSPSPLDQITERVERLLVRHAELQRANALLTAQVVSLTQERDSLRSRLNTARTRIDALLEQLPPPPDHVPATPTDLPKE AE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9200; Mature: 9200
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSPSPLDQITERVERLLVRHAELQRANALLTAQVVSLTQERDSLRSRLNTARTRIDALL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQLPPPPDHVPATPTDLPKEAE HHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDSPSPLDQITERVERLLVRHAELQRANALLTAQVVSLTQERDSLRSRLNTARTRIDALL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQLPPPPDHVPATPTDLPKEAE HHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA