Click here to switch to the map view.

The map label for this gene is 120610204

Identifier: 120610204

GI number: 120610204

Start: 1684676

End: 1685122

Strand: Reverse

Name: 120610204

Synonym: Aave_1519

Alternate gene names: NA

Gene position: 1685122-1684676 (Counterclockwise)

Preceding gene: 120610215

Following gene: 120610203

Centisome position: 31.48

GC content: 71.36

Gene sequence:

>447_bases
ATGTCCTACCGCCGCATCCTCATCGCCACCGACGGCTCCGACCTGTCCGCCAAGGCCGTCGAGCACGGGCTGTCCCTGGC
CCGGCTCTCGGGCGGCCGCGTGGTCGCGCTCAAGGTCGTGCCGCGCTACCCGCGCAGCTACTTCGAGGGCGGCTCGCCGG
TGGATGCCGCCGAGGCGCGGCGCATCGAGAGCCAGTGGGCCACCAACGCCCAGGCGCTGGTGGACGGCATCCGGCAGCTG
GGCGATGCCCAGGGGGTGAAGGTCAAGCCCGTGGTGACCAAGTCGGACCTCGTCGCCGAGGCGATCATCGCCGCGGCCAC
CAAGCACGACTGCGACCTCGTCGTGATGGCCTCGCACGGCCGCAAGGGCATCAAGCGCCTGCTGCTGGGCAGCGAGACCC
AGCACGTGCTCACGCACTCGAAGGTGCCCGTGCTCGTGCTGCGCTGA

Upstream 100 bases:

>100_bases
AAGACAGGAAGGCGCCCACCCACCTATCCTGCAGCAGAGTCATCACCACGCGCTCCCGCCAGCCCGGCATCGGCGCACTC
ATCCAGAGGAGGGAACAACG

Downstream 100 bases:

>100_bases
AGTGGTGCGGCCGGCCGGTGGCCGGCAAACGCTGCCCCATACCGAAGACTTTCCCCACCAGGAAGAGTCAGAACGTGTAA
CGCTATGGCGGAGATCACAT

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSYRRILIATDGSDLSAKAVEHGLSLARLSGGRVVALKVVPRYPRSYFEGGSPVDAAEARRIESQWATNAQALVDGIRQL
GDAQGVKVKPVVTKSDLVAEAIIAAATKHDCDLVVMASHGRKGIKRLLLGSETQHVLTHSKVPVLVLR

Sequences:

>Translated_148_residues
MSYRRILIATDGSDLSAKAVEHGLSLARLSGGRVVALKVVPRYPRSYFEGGSPVDAAEARRIESQWATNAQALVDGIRQL
GDAQGVKVKPVVTKSDLVAEAIIAAATKHDCDLVVMASHGRKGIKRLLLGSETQHVLTHSKVPVLVLR
>Mature_147_residues
SYRRILIATDGSDLSAKAVEHGLSLARLSGGRVVALKVVPRYPRSYFEGGSPVDAAEARRIESQWATNAQALVDGIRQLG
DAQGVKVKPVVTKSDLVAEAIIAAATKHDCDLVVMASHGRKGIKRLLLGSETQHVLTHSKVPVLVLR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15859; Mature: 15727

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRRILIATDGSDLSAKAVEHGLSLARLSGGRVVALKVVPRYPRSYFEGGSPVDAAEAR
CCCEEEEEEECCCCCHHHHHHHCCCEEEECCCEEEEEEECCCCCHHHCCCCCCCCHHHHH
RIESQWATNAQALVDGIRQLGDAQGVKVKPVVTKSDLVAEAIIAAATKHDCDLVVMASHG
HHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCEEEEECCC
RKGIKRLLLGSETQHVLTHSKVPVLVLR
HHHHHHHHCCCCCHHHEECCCCCEEEEC
>Mature Secondary Structure 
SYRRILIATDGSDLSAKAVEHGLSLARLSGGRVVALKVVPRYPRSYFEGGSPVDAAEAR
CCEEEEEEECCCCCHHHHHHHCCCEEEECCCEEEEEEECCCCCHHHCCCCCCCCHHHHH
RIESQWATNAQALVDGIRQLGDAQGVKVKPVVTKSDLVAEAIIAAATKHDCDLVVMASHG
HHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCEEEEECCC
RKGIKRLLLGSETQHVLTHSKVPVLVLR
HHHHHHHHCCCCCHHHEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]