Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is bfr [H]
Identifier: 120610192
GI number: 120610192
Start: 1670440
End: 1670919
Strand: Reverse
Name: bfr [H]
Synonym: Aave_1507
Alternate gene names: 120610192
Gene position: 1670919-1670440 (Counterclockwise)
Preceding gene: 120610197
Following gene: 120610189
Centisome position: 31.22
GC content: 65.83
Gene sequence:
>480_bases ATGCAGGGCAACCCTCAGGTCATCGATTACTTCAAGGATCTGCTGCGCGGCGAACTGGCCGCGCGCGACCAGTACTTCAT CCATTCGCGGATCTACGAGGACCAGGGCTTCGTGAAGCTCTACGAGCGCCTGAACCACGAGATGGAGGAAGAGACCCAGC ACGCCGACGCGCTGCTGCGCCGCATCCTGTTCCTGGGCGGCCTGCCCGACATGCGCCCCCGCGAGTTCACCCCGGGCACC ACGGTGCCCGAGATGCTGCGCAAGGACCTGGACACCGAATACGAAGTGCGCGCCGCCCTGCAGACGGGCGTGCACCTGTG CGAGAGCGTGCGCGACTACGTGAGCCGCGACATCCTCCTCGCGCAGCTCAAGGACACGGAAGAAGACCACGCCTACTGGC TCGAGAAGCAGCTGGGCCTGATCGATCGCGTGGGCCTGCAGAACTACCTGCAGTCGCAGACCGCCCCCGGCACGCCCTGA
Upstream 100 bases:
>100_bases CCGTACGCATGCAAACCGCCGCGGCGGGGGCTTTGTGCGACAACGCCACGCAACGGCGCCATACTCCCAGCCTCACAAAA ACAAGGAAAAAGAGCACACC
Downstream 100 bases:
>100_bases TCCGGACGCGCCCGTGGCGCGCCCCCATGGAACAAAGCCGCACCGTCGCCGGTGCGGCTTTTTTTCGCCCGGCAGCGGCT GCCTGCCGCGCGGCAGGCAG
Product: bacterioferritin
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MQGNPQVIDYFKDLLRGELAARDQYFIHSRIYEDQGFVKLYERLNHEMEEETQHADALLRRILFLGGLPDMRPREFTPGT TVPEMLRKDLDTEYEVRAALQTGVHLCESVRDYVSRDILLAQLKDTEEDHAYWLEKQLGLIDRVGLQNYLQSQTAPGTP
Sequences:
>Translated_159_residues MQGNPQVIDYFKDLLRGELAARDQYFIHSRIYEDQGFVKLYERLNHEMEEETQHADALLRRILFLGGLPDMRPREFTPGT TVPEMLRKDLDTEYEVRAALQTGVHLCESVRDYVSRDILLAQLKDTEEDHAYWLEKQLGLIDRVGLQNYLQSQTAPGTP >Mature_159_residues MQGNPQVIDYFKDLLRGELAARDQYFIHSRIYEDQGFVKLYERLNHEMEEETQHADALLRRILFLGGLPDMRPREFTPGT TVPEMLRKDLDTEYEVRAALQTGVHLCESVRDYVSRDILLAQLKDTEEDHAYWLEKQLGLIDRVGLQNYLQSQTAPGTP
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=155, Percent_Identity=43.8709677419355, Blast_Score=125, Evalue=1e-30,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18525; Mature: 18525
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGNPQVIDYFKDLLRGELAARDQYFIHSRIYEDQGFVKLYERLNHEMEEETQHADALLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RILFLGGLPDMRPREFTPGTTVPEMLRKDLDTEYEVRAALQTGVHLCESVRDYVSRDILL HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLKDTEEDHAYWLEKQLGLIDRVGLQNYLQSQTAPGTP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQGNPQVIDYFKDLLRGELAARDQYFIHSRIYEDQGFVKLYERLNHEMEEETQHADALLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RILFLGGLPDMRPREFTPGTTVPEMLRKDLDTEYEVRAALQTGVHLCESVRDYVSRDILL HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLKDTEEDHAYWLEKQLGLIDRVGLQNYLQSQTAPGTP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]