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The map label for this gene is 120610189

Identifier: 120610189

GI number: 120610189

Start: 1667668

End: 1667973

Strand: Reverse

Name: 120610189

Synonym: Aave_1504

Alternate gene names: NA

Gene position: 1667973-1667668 (Counterclockwise)

Preceding gene: 120610192

Following gene: 120610188

Centisome position: 31.16

GC content: 67.65

Gene sequence:

>306_bases
ATGAAGCGCACGCTCCCCCTCCTCCTGCTGGCCTTCTCCGCTGCCGCGCCGGCCCTCGCCGACCAGGCCCTGGCCACGGC
CAAGAACTGCATGGCCTGCCATGCCGTGGACAAGAAGCTCGTGGGCCCTTCCTACAAGGACGTGGCGGCCAAGTACGCCG
GCCAGAAGGACGCCGTGGACAAGCTGGCCGCCAAGATCATGAAGGGCGGCTCCGGCGTGTGGGGTCCGGTGCCCATGCCG
GCCAACTCCCAGGTGAACGAGGCCGATGCGAAGAAACTGGCGGCCTGGGTGCTGTCGCTCAAGTAA

Upstream 100 bases:

>100_bases
GGGATGGCGCGGTCCGGGCATCGGAAAGGCCTGCACGGCACGTCAACCCCGCCCACTACAATTTCATTGAGCCGGATACT
AACCCACACGAAAGCACCCC

Downstream 100 bases:

>100_bases
CGCAGGCCGGACAGGCTGCTGAAATACCCCTTCGCCCGCGGACAACCCGAGTCGCAACCTCCTCCCATTCCATGCCGGGC
ATTGCATCGGGAAAGCTGGT

Product: class I cytochrome c

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKRTLPLLLLAFSAAAPALADQALATAKNCMACHAVDKKLVGPSYKDVAAKYAGQKDAVDKLAAKIMKGGSGVWGPVPMP
ANSQVNEADAKKLAAWVLSLK

Sequences:

>Translated_101_residues
MKRTLPLLLLAFSAAAPALADQALATAKNCMACHAVDKKLVGPSYKDVAAKYAGQKDAVDKLAAKIMKGGSGVWGPVPMP
ANSQVNEADAKKLAAWVLSLK
>Mature_101_residues
MKRTLPLLLLAFSAAAPALADQALATAKNCMACHAVDKKLVGPSYKDVAAKYAGQKDAVDKLAAKIMKGGSGVWGPVPMP
ANSQVNEADAKKLAAWVLSLK

Specific function: Reacts with hydrogenase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10491; Mature: 10491

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS00165 DEHYDRATASE_SER_THR ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLPLLLLAFSAAAPALADQALATAKNCMACHAVDKKLVGPSYKDVAAKYAGQKDAVD
CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHH
KLAAKIMKGGSGVWGPVPMPANSQVNEADAKKLAAWVLSLK
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRTLPLLLLAFSAAAPALADQALATAKNCMACHAVDKKLVGPSYKDVAAKYAGQKDAVD
CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHH
KLAAKIMKGGSGVWGPVPMPANSQVNEADAKKLAAWVLSLK
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1645652; 2536668; 2558725; 9657676 [H]