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The map label for this gene is 120610178

Identifier: 120610178

GI number: 120610178

Start: 1655081

End: 1656301

Strand: Reverse

Name: 120610178

Synonym: Aave_1492

Alternate gene names: NA

Gene position: 1656301-1655081 (Counterclockwise)

Preceding gene: 120610179

Following gene: 120610176

Centisome position: 30.94

GC content: 73.63

Gene sequence:

>1221_bases
ATGTACCTTCCAGCCGACCGCACCGCCCGCTCCCGCGACGCCGAGCCCCGCCCCGCTCCGCCGGAGCGACTTCCCGGCGG
CCTGCGCTACGTCCACCCCGACACCCTGCCGGGACTCACTCGCGTGCTGCGCGGCAAGCACTTCAAATTCCGCACGCCCG
ACGGGCAGTGGGTGACGGACGAGGAAGAGATCGCCCGCATCCGCAAGCTGGCGATTCCGCCTGCCTACACGAATGTCTGG
ATCTGCCCGCTGCCCGAAGGCCACCTGCAGGCCACCGGGCTGGATGCGCGCGGACGCCGGCAGTACCGCTACCACCCCGA
ATGGCGCCAGCAGCGCGACGAGGCCAAGTTCGAGCGCATGCAGGCCTTCGGCCGGGCCCTGCCGCGCATCCGCGCCCGCG
TGGCGCGCGACCTCCGCCCCCGGCGCGGCGAGCCCGCGCTCTCGCGCACGGTGGTGCTGGCGACCATCGTCCGGCTCCTG
GACACGACCTTCCTGCGCGTGGGCAACGAGGAGTACGCGGCCGCCAACCGCTCCTACGGCCTCACCACGCTGCGCAACCG
GCATGCGGGCGTGCGCGGCAGCAGGCTCACCCTGCGCTTTCGCGGCAAGAGCGGCGTGGAGCAGCAGGCGACCGTGGACG
ACCCGCGCGTGGCCCGCGTGGTGCGCCGGTGCCAGCAGCTGCCGGGGCAGGAGTTGTTCCAGTACGAGGACGAAGACGGC
ACACGGCACACCGTGGGCTCCGGCGACGTGAACGACTACCTGCACGAGATCGCGGGCACGGACGAGGGAGCGCCGGGTGG
CGGCATGCGCTTCACCGCCAAGGATTTCCGGACCTGGCACGGCACGGCCCAGGCCCTGGAGCTCACGCGCATCGCCTGCA
CGCAGCCCGAGGGCGCCCCGGTCGCGACCGCCAAGCACATCCTGGCGGAAGTGGCGCGCCAACTGGGCAACACCCCGGCG
GTCTGCAAGAAGTCCTACATCCATCCCGCCGTGCTGGAACTCGGTTCACGGCTCGCGTCGGACGCCGGCCCTGGCATGCA
GGCGGTGTGGCAGCGCATGGGCGAGCGCGCCACCGGGGCCCGGGGCCTCAGCGCCGTGGAGCGCCGGCTGATGGCCTTCC
TGCAGGACACCGCCCGTGCCCGGGCGCGCGCCGAAAGAAAAGCCCGCGCCGCCGGGCCTGCCCTGCCGGCCCGGCGCGCC
CGCCGCAAGGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
GCGTCGCGCACCTTTCCCACCGGCGGGCCCTGGCGCTTCCTACAGCGCCGCGGAGCGAAACCGTGTGTGATGGACCCAGA
TCCGCACACAGGCCCCGTCC

Downstream 100 bases:

>100_bases
GCGGCTGCCGCGTCAGCGGCCCACCATGTTGCCGGGCACCACCCACTGGTCGAACTGCTCGCCCGTCACGTGGCCCGACG
CCACGGCCGCCTCGCGCAGC

Product: putative DNA topoisomerase

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerasei; -Like DNA poisomerase I; DNA poisomerase ; Type I DNA poisomerase; Eukaryotic-Like DNA poisomerase I

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MYLPADRTARSRDAEPRPAPPERLPGGLRYVHPDTLPGLTRVLRGKHFKFRTPDGQWVTDEEEIARIRKLAIPPAYTNVW
ICPLPEGHLQATGLDARGRRQYRYHPEWRQQRDEAKFERMQAFGRALPRIRARVARDLRPRRGEPALSRTVVLATIVRLL
DTTFLRVGNEEYAAANRSYGLTTLRNRHAGVRGSRLTLRFRGKSGVEQQATVDDPRVARVVRRCQQLPGQELFQYEDEDG
TRHTVGSGDVNDYLHEIAGTDEGAPGGGMRFTAKDFRTWHGTAQALELTRIACTQPEGAPVATAKHILAEVARQLGNTPA
VCKKSYIHPAVLELGSRLASDAGPGMQAVWQRMGERATGARGLSAVERRLMAFLQDTARARARAERKARAAGPALPARRA
RRKAAA

Sequences:

>Translated_406_residues
MYLPADRTARSRDAEPRPAPPERLPGGLRYVHPDTLPGLTRVLRGKHFKFRTPDGQWVTDEEEIARIRKLAIPPAYTNVW
ICPLPEGHLQATGLDARGRRQYRYHPEWRQQRDEAKFERMQAFGRALPRIRARVARDLRPRRGEPALSRTVVLATIVRLL
DTTFLRVGNEEYAAANRSYGLTTLRNRHAGVRGSRLTLRFRGKSGVEQQATVDDPRVARVVRRCQQLPGQELFQYEDEDG
TRHTVGSGDVNDYLHEIAGTDEGAPGGGMRFTAKDFRTWHGTAQALELTRIACTQPEGAPVATAKHILAEVARQLGNTPA
VCKKSYIHPAVLELGSRLASDAGPGMQAVWQRMGERATGARGLSAVERRLMAFLQDTARARARAERKARAAGPALPARRA
RRKAAA
>Mature_406_residues
MYLPADRTARSRDAEPRPAPPERLPGGLRYVHPDTLPGLTRVLRGKHFKFRTPDGQWVTDEEEIARIRKLAIPPAYTNVW
ICPLPEGHLQATGLDARGRRQYRYHPEWRQQRDEAKFERMQAFGRALPRIRARVARDLRPRRGEPALSRTVVLATIVRLL
DTTFLRVGNEEYAAANRSYGLTTLRNRHAGVRGSRLTLRFRGKSGVEQQATVDDPRVARVVRRCQQLPGQELFQYEDEDG
TRHTVGSGDVNDYLHEIAGTDEGAPGGGMRFTAKDFRTWHGTAQALELTRIACTQPEGAPVATAKHILAEVARQLGNTPA
VCKKSYIHPAVLELGSRLASDAGPGMQAVWQRMGERATGARGLSAVERRLMAFLQDTARARARAERKARAAGPALPARRA
RRKAAA

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45312; Mature: 45312

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLPADRTARSRDAEPRPAPPERLPGGLRYVHPDTLPGLTRVLRGKHFKFRTPDGQWVTD
CCCCCCCCCCCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHCCCCCEEECCCCCCCCC
EEEIARIRKLAIPPAYTNVWICPLPEGHLQATGLDARGRRQYRYHPEWRQQRDEAKFERM
HHHHHHHHHHCCCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QAFGRALPRIRARVARDLRPRRGEPALSRTVVLATIVRLLDTTFLRVGNEEYAAANRSYG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
LTTLRNRHAGVRGSRLTLRFRGKSGVEQQATVDDPRVARVVRRCQQLPGQELFQYEDEDG
CHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCC
TRHTVGSGDVNDYLHEIAGTDEGAPGGGMRFTAKDFRTWHGTAQALELTRIACTQPEGAP
CEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHCCCCCCC
VATAKHILAEVARQLGNTPAVCKKSYIHPAVLELGSRLASDAGPGMQAVWQRMGERATGA
HHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
RGLSAVERRLMAFLQDTARARARAERKARAAGPALPARRARRKAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MYLPADRTARSRDAEPRPAPPERLPGGLRYVHPDTLPGLTRVLRGKHFKFRTPDGQWVTD
CCCCCCCCCCCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHCCCCCEEECCCCCCCCC
EEEIARIRKLAIPPAYTNVWICPLPEGHLQATGLDARGRRQYRYHPEWRQQRDEAKFERM
HHHHHHHHHHCCCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QAFGRALPRIRARVARDLRPRRGEPALSRTVVLATIVRLLDTTFLRVGNEEYAAANRSYG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
LTTLRNRHAGVRGSRLTLRFRGKSGVEQQATVDDPRVARVVRRCQQLPGQELFQYEDEDG
CHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCC
TRHTVGSGDVNDYLHEIAGTDEGAPGGGMRFTAKDFRTWHGTAQALELTRIACTQPEGAP
CEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHCCCCCCC
VATAKHILAEVARQLGNTPAVCKKSYIHPAVLELGSRLASDAGPGMQAVWQRMGERATGA
HHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
RGLSAVERRLMAFLQDTARARARAERKARAAGPALPARRARRKAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA