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The map label for this gene is yagR [H]

Identifier: 120610172

GI number: 120610172

Start: 1644568

End: 1646817

Strand: Reverse

Name: yagR [H]

Synonym: Aave_1485

Alternate gene names: 120610172

Gene position: 1646817-1644568 (Counterclockwise)

Preceding gene: 120610173

Following gene: 120610152

Centisome position: 30.77

GC content: 71.24

Gene sequence:

>2250_bases
ATGAAGTTCGACACCCCCGCCACCGCCAACCCCATCGACCAGCTCAAGGTCGTGGGCCAGCCGGTGAACCGCATCGACGG
CCTGCGCAAGACCACCGGCACCGCGCCCTACGCCTACGAGAGGCACGACGTCGCGCCCGACGCAGCCTACGGCGTCGTCG
TGGGATCGGCGATCGCGCACGGCACCATCCGCCACATCGACCTGGAGCGCGCCCGCCGTGCGCCCGGCGTGCTGGCCGTC
GTCACCGCGCAGTCGGCGGGCAAGCTGGGCCAGGGCAGGATGAACACCGCGCCGCTGCTGGCGGGCCCGCAGATCGACCA
CTACCACCAGGCCGTGGCGCTGGTGGTGGCCGAGACCTTCGAACAGGCCCGCGCCGCCGCGCAGCTGGTGCGCGTGGACT
ACGACCGCCAGCCCGGCCGCTACGACCTGGCCGCCGCCAAGGACTCGGCCACGAAGCCCGAGGACATCAACGGCGATGCA
CCCGACACGGCGGTGGGCGACTTCGCGGGCGCCTTCGCCGCCGCCCCCGTTCAGGTCGATGCCACCTACACCACGCCCGA
CCAGTCGCACGCCATGATGGAGCCGCACGCCACCATCGCCGCCTGGAAGGGCGACCAGCTCACCGTCTGGACCTCCAACC
AGATGATCGCCTGGGGCCAGGGCGAACTGGCGAAGACGCTGGGCATCCCGAAGGACAAGGTGCGGCTGGTGTCGCCCTTC
ATCGGCGGCGGCTTCGGCGGCAAGCTCTTCCTGCGCGCCGACGCCCTGCTGGCCGCCTTGGGCGCGCGTGCGGCGAAGCG
CCCGGTCAAGGTGGCGCTGCAGCGTCCGCTGATGATGAACAACACCACGCACCGGCCGGCCACCATCCAGCGCGTGCGCA
TCGGCGCCGACGCGCAGGGCAAGATCCTCGCGATCGGCCACGAGTGCTGGTCGGGCGACCTGCCCGGCGGCCAGGCCGAC
GGCGCCGTGGACCAGACCCGCAGGCTCTATGCGGGCGCGAACCGCATGACCGCCACGCGCCTGGCCGAACTGCACCTGCC
CGAAGCCAATGCGATGCGCGCGCCCGGAGAAGCCACCGGCCACATGGCGCTGGAAGTCGCCATGGACGAGCTGGCCGAGA
AGCTCGGCATCGACCCCGTGGAACTCCGCATCCGCAACGACACGCAGGTCGTGCCCGACACCACGGGAGAAAAAGGCGGC
GACAAAGGCGACGGCAAGCGCCCCGAAAAGCGCTTCTCGCAGCGCCGGCTGGTGGAGTGCCTGCGCCTGGGCGCCGAACG
CTTCGGCTGGAATGCGCGCAACCCGCTGCCCGCGCAGCGCCGCGAGGGCCGCTGGTGGGTGGGCCTGGGTATGGCGTCGG
CCTACCGCGGCGCGCCCGTCATGAAGTCCGCCGCCCGCGTGCGGCTGGATGGCGAGGGCCGCATCCTGGTGGAAACCGAC
ATGACGGACATCGGCACCGGCAGCTACACCATCATCGCCCAGACCGCGGCCGAGATGATGGGCGTGCCGCTCTCGCGCGT
CGCGGTGCGGCTGGGCGACTCCGACTTTCCCGTCTCGGCCGGCTCGGGCGGACAGTGGGGCGCGGCCAGCTCCACTTCGG
GCGTCTATGCCGCGTGCGTGAAACTGCGCGAGGCCGTCGCCAAGAAACTGGGCCTGGACCCGGCCACGGCCCAGTTCGCC
GACGGGCAGGTGTCAGCGGGAGGGCGCAGCGTGGCACTCGCCGATGCCGCCCGCGATGGCGAGCCGGAGGCGGAGGACAC
CATCGAATTCGGCGTGCTGGAGAAGGAAACCCAGCAGTCCACCTTCGGCGCGCATTTCGTCGAGGTCGCCGTGGACGCGT
TCACCGCCGAGGTGCGCATCCGCCGCATGCTGGCCGTGTGCGCGGCGGGCCGCATCCTGAATCCCAAATCGGCGCGCAGC
CAGGTGATCGGCGCCATGACCATGGGCGTGGGCAGCGCGCTGATGGAGGAACTCGCGGTGGACACCCGCCTGGGCTTCTT
CGTGAACCACGACCTGGCCGGCTACGAGGTGCCGGTGCATGCCGACATCCCGCACCAGGAGGTGGTCTTCCTCGACGAGA
CCGACCCGCGCGCCTCGCCCATGAAGGCCGAGGTTGTGGGCGAGCTGGGTATCTGCGGCGTGAGCGCGGCCATCGCCAAC
GCGATCTACAACGCGACCGGGGTGCGCGTGCGGGACTATCCCATCACGCTCGACAAACTGATCGCCGGGATGCCGCGCAC
GGCGGTGTAG

Upstream 100 bases:

>100_bases
TGCTGGCCGGTGCCCGCCCCACCCACGAGAACGCCTTCAAGCTGCCCCTGGCCGAACGCACGCTGGCCGCAGCCCTTTCC
CAGGCCCGGAGCTGACCGCC

Downstream 100 bases:

>100_bases
GCACGGTTGCGGCCCCGGCCGTCAGTCCTGCCAGAGCGGCTCGCCACCGCGCTCCAGGTGGGTGAGGTACACGCGCGTGT
CGAACTCGTACTGGTGGTAG

Product: xanthine dehydrogenase, molybdenum-binding subunit apoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 749; Mature: 749

Protein sequence:

>749_residues
MKFDTPATANPIDQLKVVGQPVNRIDGLRKTTGTAPYAYERHDVAPDAAYGVVVGSAIAHGTIRHIDLERARRAPGVLAV
VTAQSAGKLGQGRMNTAPLLAGPQIDHYHQAVALVVAETFEQARAAAQLVRVDYDRQPGRYDLAAAKDSATKPEDINGDA
PDTAVGDFAGAFAAAPVQVDATYTTPDQSHAMMEPHATIAAWKGDQLTVWTSNQMIAWGQGELAKTLGIPKDKVRLVSPF
IGGGFGGKLFLRADALLAALGARAAKRPVKVALQRPLMMNNTTHRPATIQRVRIGADAQGKILAIGHECWSGDLPGGQAD
GAVDQTRRLYAGANRMTATRLAELHLPEANAMRAPGEATGHMALEVAMDELAEKLGIDPVELRIRNDTQVVPDTTGEKGG
DKGDGKRPEKRFSQRRLVECLRLGAERFGWNARNPLPAQRREGRWWVGLGMASAYRGAPVMKSAARVRLDGEGRILVETD
MTDIGTGSYTIIAQTAAEMMGVPLSRVAVRLGDSDFPVSAGSGGQWGAASSTSGVYAACVKLREAVAKKLGLDPATAQFA
DGQVSAGGRSVALADAARDGEPEAEDTIEFGVLEKETQQSTFGAHFVEVAVDAFTAEVRIRRMLAVCAAGRILNPKSARS
QVIGAMTMGVGSALMEELAVDTRLGFFVNHDLAGYEVPVHADIPHQEVVFLDETDPRASPMKAEVVGELGICGVSAAIAN
AIYNATGVRVRDYPITLDKLIAGMPRTAV

Sequences:

>Translated_749_residues
MKFDTPATANPIDQLKVVGQPVNRIDGLRKTTGTAPYAYERHDVAPDAAYGVVVGSAIAHGTIRHIDLERARRAPGVLAV
VTAQSAGKLGQGRMNTAPLLAGPQIDHYHQAVALVVAETFEQARAAAQLVRVDYDRQPGRYDLAAAKDSATKPEDINGDA
PDTAVGDFAGAFAAAPVQVDATYTTPDQSHAMMEPHATIAAWKGDQLTVWTSNQMIAWGQGELAKTLGIPKDKVRLVSPF
IGGGFGGKLFLRADALLAALGARAAKRPVKVALQRPLMMNNTTHRPATIQRVRIGADAQGKILAIGHECWSGDLPGGQAD
GAVDQTRRLYAGANRMTATRLAELHLPEANAMRAPGEATGHMALEVAMDELAEKLGIDPVELRIRNDTQVVPDTTGEKGG
DKGDGKRPEKRFSQRRLVECLRLGAERFGWNARNPLPAQRREGRWWVGLGMASAYRGAPVMKSAARVRLDGEGRILVETD
MTDIGTGSYTIIAQTAAEMMGVPLSRVAVRLGDSDFPVSAGSGGQWGAASSTSGVYAACVKLREAVAKKLGLDPATAQFA
DGQVSAGGRSVALADAARDGEPEAEDTIEFGVLEKETQQSTFGAHFVEVAVDAFTAEVRIRRMLAVCAAGRILNPKSARS
QVIGAMTMGVGSALMEELAVDTRLGFFVNHDLAGYEVPVHADIPHQEVVFLDETDPRASPMKAEVVGELGICGVSAAIAN
AIYNATGVRVRDYPITLDKLIAGMPRTAV
>Mature_749_residues
MKFDTPATANPIDQLKVVGQPVNRIDGLRKTTGTAPYAYERHDVAPDAAYGVVVGSAIAHGTIRHIDLERARRAPGVLAV
VTAQSAGKLGQGRMNTAPLLAGPQIDHYHQAVALVVAETFEQARAAAQLVRVDYDRQPGRYDLAAAKDSATKPEDINGDA
PDTAVGDFAGAFAAAPVQVDATYTTPDQSHAMMEPHATIAAWKGDQLTVWTSNQMIAWGQGELAKTLGIPKDKVRLVSPF
IGGGFGGKLFLRADALLAALGARAAKRPVKVALQRPLMMNNTTHRPATIQRVRIGADAQGKILAIGHECWSGDLPGGQAD
GAVDQTRRLYAGANRMTATRLAELHLPEANAMRAPGEATGHMALEVAMDELAEKLGIDPVELRIRNDTQVVPDTTGEKGG
DKGDGKRPEKRFSQRRLVECLRLGAERFGWNARNPLPAQRREGRWWVGLGMASAYRGAPVMKSAARVRLDGEGRILVETD
MTDIGTGSYTIIAQTAAEMMGVPLSRVAVRLGDSDFPVSAGSGGQWGAASSTSGVYAACVKLREAVAKKLGLDPATAQFA
DGQVSAGGRSVALADAARDGEPEAEDTIEFGVLEKETQQSTFGAHFVEVAVDAFTAEVRIRRMLAVCAAGRILNPKSARS
QVIGAMTMGVGSALMEELAVDTRLGFFVNHDLAGYEVPVHADIPHQEVVFLDETDPRASPMKAEVVGELGICGVSAAIAN
AIYNATGVRVRDYPITLDKLIAGMPRTAV

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=725, Percent_Identity=23.8620689655172, Blast_Score=147, Evalue=4e-35,
Organism=Homo sapiens, GI71773480, Length=750, Percent_Identity=24.4, Blast_Score=146, Evalue=7e-35,
Organism=Escherichia coli, GI1786478, Length=745, Percent_Identity=66.9798657718121, Blast_Score=976, Evalue=0.0,
Organism=Escherichia coli, GI1789230, Length=763, Percent_Identity=30.4062909567497, Blast_Score=246, Evalue=4e-66,
Organism=Escherichia coli, GI1789246, Length=807, Percent_Identity=27.633209417596, Blast_Score=219, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI17540638, Length=741, Percent_Identity=25.2361673414305, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24647199, Length=737, Percent_Identity=23.7449118046133, Blast_Score=131, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24647201, Length=738, Percent_Identity=24.1192411924119, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24647195, Length=742, Percent_Identity=24.7978436657682, Blast_Score=122, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24647197, Length=762, Percent_Identity=24.5406824146982, Blast_Score=114, Evalue=4e-25,
Organism=Drosophila melanogaster, GI17737937, Length=637, Percent_Identity=25.5886970172684, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24647193, Length=738, Percent_Identity=23.4417344173442, Blast_Score=107, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 79497; Mature: 79497

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDTPATANPIDQLKVVGQPVNRIDGLRKTTGTAPYAYERHDVAPDAAYGVVVGSAIAH
CCCCCCCCCCHHHHHHHHCCCHHHHCCHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHC
GTIRHIDLERARRAPGVLAVVTAQSAGKLGQGRMNTAPLLAGPQIDHYHQAVALVVAETF
CCEEEEEHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH
EQARAAAQLVRVDYDRQPGRYDLAAAKDSATKPEDINGDAPDTAVGDFAGAFAAAPVQVD
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
ATYTTPDQSHAMMEPHATIAAWKGDQLTVWTSNQMIAWGQGELAKTLGIPKDKVRLVSPF
EEECCCCCCCCEECCCCEEEEECCCEEEEEECCCEEEECCCHHHHHHCCCHHHHEEECHH
IGGGFGGKLFLRADALLAALGARAAKRPVKVALQRPLMMNNTTHRPATIQRVRIGADAQG
HCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCCCEEEEEEECCCCCC
KILAIGHECWSGDLPGGQADGAVDQTRRLYAGANRMTATRLAELHLPEANAMRAPGEATG
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
HMALEVAMDELAEKLGIDPVELRIRNDTQVVPDTTGEKGGDKGDGKRPEKRFSQRRLVEC
HHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LRLGAERFGWNARNPLPAQRREGRWWVGLGMASAYRGAPVMKSAARVRLDGEGRILVETD
HHHHHHHCCCCCCCCCCCHHCCCCEEEEECHHHHHCCCHHHCCCEEEEECCCCEEEEEEC
MTDIGTGSYTIIAQTAAEMMGVPLSRVAVRLGDSDFPVSAGSGGQWGAASSTSGVYAACV
CCCCCCCCEEEEEHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
KLREAVAKKLGLDPATAQFADGQVSAGGRSVALADAARDGEPEAEDTIEFGVLEKETQQS
HHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCHHHEEECCCCCHHHHH
TFGAHFVEVAVDAFTAEVRIRRMLAVCAAGRILNPKSARSQVIGAMTMGVGSALMEELAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DTRLGFFVNHDLAGYEVPVHADIPHQEVVFLDETDPRASPMKAEVVGELGICGVSAAIAN
HHHCCEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHH
AIYNATGVRVRDYPITLDKLIAGMPRTAV
HHHCCCCCEEEECCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MKFDTPATANPIDQLKVVGQPVNRIDGLRKTTGTAPYAYERHDVAPDAAYGVVVGSAIAH
CCCCCCCCCCHHHHHHHHCCCHHHHCCHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHC
GTIRHIDLERARRAPGVLAVVTAQSAGKLGQGRMNTAPLLAGPQIDHYHQAVALVVAETF
CCEEEEEHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH
EQARAAAQLVRVDYDRQPGRYDLAAAKDSATKPEDINGDAPDTAVGDFAGAFAAAPVQVD
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
ATYTTPDQSHAMMEPHATIAAWKGDQLTVWTSNQMIAWGQGELAKTLGIPKDKVRLVSPF
EEECCCCCCCCEECCCCEEEEECCCEEEEEECCCEEEECCCHHHHHHCCCHHHHEEECHH
IGGGFGGKLFLRADALLAALGARAAKRPVKVALQRPLMMNNTTHRPATIQRVRIGADAQG
HCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCCCEEEEEEECCCCCC
KILAIGHECWSGDLPGGQADGAVDQTRRLYAGANRMTATRLAELHLPEANAMRAPGEATG
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
HMALEVAMDELAEKLGIDPVELRIRNDTQVVPDTTGEKGGDKGDGKRPEKRFSQRRLVEC
HHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LRLGAERFGWNARNPLPAQRREGRWWVGLGMASAYRGAPVMKSAARVRLDGEGRILVETD
HHHHHHHCCCCCCCCCCCHHCCCCEEEEECHHHHHCCCHHHCCCEEEEECCCCEEEEEEC
MTDIGTGSYTIIAQTAAEMMGVPLSRVAVRLGDSDFPVSAGSGGQWGAASSTSGVYAACV
CCCCCCCCEEEEEHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
KLREAVAKKLGLDPATAQFADGQVSAGGRSVALADAARDGEPEAEDTIEFGVLEKETQQS
HHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCHHHEEECCCCCHHHHH
TFGAHFVEVAVDAFTAEVRIRRMLAVCAAGRILNPKSARSQVIGAMTMGVGSALMEELAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DTRLGFFVNHDLAGYEVPVHADIPHQEVVFLDETDPRASPMKAEVVGELGICGVSAAIAN
HHHCCEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHH
AIYNATGVRVRDYPITLDKLIAGMPRTAV
HHHCCCCCEEEECCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]