Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is lon [H]
Identifier: 120610144
GI number: 120610144
Start: 1604726
End: 1607152
Strand: Reverse
Name: lon [H]
Synonym: Aave_1457
Alternate gene names: 120610144
Gene position: 1607152-1604726 (Counterclockwise)
Preceding gene: 120610145
Following gene: 120610143
Centisome position: 30.02
GC content: 65.35
Gene sequence:
>2427_bases ATGTCCGGACATACCCCCCTGCCAGCCACCCCCATCGACCTCCCACTGCTTCCCTTGCGCGACGTGGTGGTGTTCCCCCA CATGGTGATTCCGCTGTTCGTGGGCCGGCCCAAGAGCATCAAGGCCCTGGAACTGGCCATGGACGCCGACCGGCGCATCA TGCTGGTCGCCCAGAAGACCGCGGCCAAGGACGAGCCGCTGGTGTCCGACATGTTCGACGTCGGCTGCGTCTCCACGATC CTGCAGATGCTCAAGCTGCCCGACGGCACCGTCAAGGTGCTGGTGGAAGGCCAGCAGCGGGCCCAGGTCACCTCCATCGA GGACCATGAAAGCCACTTCACCTCCACCGTGACGCCCGTGCCCGCCAGCGACGGCGACCACAAGCCCAGCGAGATCGAAG CGCTGCGCCGCGCGGTGATGCAGCAGTTCGACCAGTACGTCAAGCTGAACAAGAAGATCCCGCCCGAGATCCTCACCTCC ATCGCGAGCATCGACGATCCGGGCCGCCTTGCCGACACCATCGCCGCCCACCTGCCCCTCAAGCTGGAGAACAAGCAGGC CGTGCTGGACCTGGCCGATGTCAAGGAACGCCTCGAGAACCTGTTCGAGCAGCTCGACCGCGAGGTGGACATCCTCAACG TGGACAAGCGCATCCGCGGCCGCGTCAAGCGCCAGATGGAGAAGAACCAGCGCGACTTCTACCTGAACGAGCAGGTGAAG GCCATCCAGAAGGAACTGGGCGAAGGCGAGGAAGGCGCGGACATCGAGGAGATCGAGAAGAAGATCAAGGCCGCGAAGAT GCCCGCGGACGCGCGCAAGAAGGCCGAGAGCGAACTCAAGAAGCTCAAGCTGATGTCGCCCATGTCGGCGGAAGCCACGG TCGTGCGCAACTACATCGAGGTCCTGACCGGCCTGCCCTGGAGCAAGCGCACGAAGATCAAGCACGACCTCGCCAACGCG GAGGAAGTGCTCAACGAGGACCACTACGGCCTGGACAAGGTCAAGGACCGCATCCTCGAATACCTCGCGGTGCAGCAGCG CGTGGACAAGGTCAAGGCCCCCATCCTCTGCCTGGTGGGCCCGCCCGGGGTCGGCAAGACCTCGCTCGGCCAGTCCATCG CCAAGGCGACGGGCCGCAAGTACGTGCGCATGGCGCTCGGCGGCATGCGCGACGAGGCGGAAATCCGCGGCCACCGCCGC ACCTACATCGGCGCCATGCCCGGCAAGGTGCTGCAGAGCCTGAACAAGGTCGGCACACGCAACCCGCTCTTCCTGCTCGA CGAGATCGACAAGCTGGGCACGGACTTCCGCGGCGACCCGTCCAGCGCGCTGCTGGAAGTGCTCGACCCGGAGCAGAACC ACAAGTTCGGCGACCACTACGTGGAGGTCGATTTCGACCTGAGCGACGTGATGTTCGTGGCCACGTCGAACTCCATGAAC ATCCCGCCCGCCCTGCTGGACCGGATGGAAGTCATCCGCCTCTCGGGCTACACGGAAGACGAGAAGGCGAACATCGCCAT CAAGTACCTGCTGCCCAAGCAGATGGTCAACAACGGCGTCAAGGACGAGGAGTTGCGGGTCGAGGAAAGCGCGGTGCGCG ACGTCATCCGCTACTACACCCGCGAGGCAGGCGTGCGCTCGCTCGAGCGCGAACTCTCCAAGATCTGCCGAAAGGTGGTC AAGGGCCTGCAGCTCAAGAAGCTCGAGCCCCAGGTGGTGGTCACCGCGGACAACCTGGCCGAATACCTGGGCGTGCGCAA GCACACCTATGGCCGGGCGGAACAGCAGAACCAGGTGGGCCAGGTGGTCGGCCTCGCGTGGACCGAGGTCGGCGGCGACC TGCTCACCATCGAAGCCGCGACCATGCCCGGCAAGGGAACCATCACGCGCACGGGCTCGCTCGGCGACGTCATGAAGGAA TCCGTGGAAGCCGCGCGCACCGTGGTGCGCAGCCGCGCCCACCGCCTGGGCATCAAGGACGAGGTGTTCGAGAAGCGCGA CATGCACATCCACGTGCCGGACGGTGCCACGCCCAAGGATGGCCCGAGCGCCGGCGCGGCCATGACCACGGCCTTCGTAT CCGCCCTCACGGGCATCCCCGTGCGCAGCGATGTCGCGATGACCGGCGAGATCACCCTGCGGGGCGAGGTCACGGCCATC GGCGGCCTGAAGGAAAAGCTGCTCGCGGCACTGCGCGGCGGCATCAAGACGGTGCTGATTCCCGAGGAAAACGTCAAGGA CCTGCAGGAGATCCCGGACAACGTGAAGAGCGGCCTGGAGATCATTCCGGTCAAGTGGATCGACAAGGTGCTGGAAGTCG CCCTGGAGCGCAAGCCGATCGCGCTGACGGAAGAAGAGATCGCCGCGTCCATCACCGCCCGGGAAAACCGCCAGGCACAG GGCTCCACGGATTCCGTGAAGCATTGA
Upstream 100 bases:
>100_bases GGCCGGACGCCCTGCCGCGGCCCCGGTCATCCAGGATGGTGCCGCGGGTTGAAAATACCGGCTGGTGGACCATATTCCAC TCAGTTTCACAAGGATTCCC
Downstream 100 bases:
>100_bases ACGCGAAATTTTTCCGGAACCACCCAAAAAGTGCGCTACAATTCACTCCATCGATGCCAAACGTTGTAGAATGCAAGGCT TCGGTAAATGCGGGAATAGC
Product: Lon-A peptidase
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 808; Mature: 807
Protein sequence:
>808_residues MSGHTPLPATPIDLPLLPLRDVVVFPHMVIPLFVGRPKSIKALELAMDADRRIMLVAQKTAAKDEPLVSDMFDVGCVSTI LQMLKLPDGTVKVLVEGQQRAQVTSIEDHESHFTSTVTPVPASDGDHKPSEIEALRRAVMQQFDQYVKLNKKIPPEILTS IASIDDPGRLADTIAAHLPLKLENKQAVLDLADVKERLENLFEQLDREVDILNVDKRIRGRVKRQMEKNQRDFYLNEQVK AIQKELGEGEEGADIEEIEKKIKAAKMPADARKKAESELKKLKLMSPMSAEATVVRNYIEVLTGLPWSKRTKIKHDLANA EEVLNEDHYGLDKVKDRILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGMRDEAEIRGHRR TYIGAMPGKVLQSLNKVGTRNPLFLLDEIDKLGTDFRGDPSSALLEVLDPEQNHKFGDHYVEVDFDLSDVMFVATSNSMN IPPALLDRMEVIRLSGYTEDEKANIAIKYLLPKQMVNNGVKDEELRVEESAVRDVIRYYTREAGVRSLERELSKICRKVV KGLQLKKLEPQVVVTADNLAEYLGVRKHTYGRAEQQNQVGQVVGLAWTEVGGDLLTIEAATMPGKGTITRTGSLGDVMKE SVEAARTVVRSRAHRLGIKDEVFEKRDMHIHVPDGATPKDGPSAGAAMTTAFVSALTGIPVRSDVAMTGEITLRGEVTAI GGLKEKLLAALRGGIKTVLIPEENVKDLQEIPDNVKSGLEIIPVKWIDKVLEVALERKPIALTEEEIAASITARENRQAQ GSTDSVKH
Sequences:
>Translated_808_residues MSGHTPLPATPIDLPLLPLRDVVVFPHMVIPLFVGRPKSIKALELAMDADRRIMLVAQKTAAKDEPLVSDMFDVGCVSTI LQMLKLPDGTVKVLVEGQQRAQVTSIEDHESHFTSTVTPVPASDGDHKPSEIEALRRAVMQQFDQYVKLNKKIPPEILTS IASIDDPGRLADTIAAHLPLKLENKQAVLDLADVKERLENLFEQLDREVDILNVDKRIRGRVKRQMEKNQRDFYLNEQVK AIQKELGEGEEGADIEEIEKKIKAAKMPADARKKAESELKKLKLMSPMSAEATVVRNYIEVLTGLPWSKRTKIKHDLANA EEVLNEDHYGLDKVKDRILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGMRDEAEIRGHRR TYIGAMPGKVLQSLNKVGTRNPLFLLDEIDKLGTDFRGDPSSALLEVLDPEQNHKFGDHYVEVDFDLSDVMFVATSNSMN IPPALLDRMEVIRLSGYTEDEKANIAIKYLLPKQMVNNGVKDEELRVEESAVRDVIRYYTREAGVRSLERELSKICRKVV KGLQLKKLEPQVVVTADNLAEYLGVRKHTYGRAEQQNQVGQVVGLAWTEVGGDLLTIEAATMPGKGTITRTGSLGDVMKE SVEAARTVVRSRAHRLGIKDEVFEKRDMHIHVPDGATPKDGPSAGAAMTTAFVSALTGIPVRSDVAMTGEITLRGEVTAI GGLKEKLLAALRGGIKTVLIPEENVKDLQEIPDNVKSGLEIIPVKWIDKVLEVALERKPIALTEEEIAASITARENRQAQ GSTDSVKH >Mature_807_residues SGHTPLPATPIDLPLLPLRDVVVFPHMVIPLFVGRPKSIKALELAMDADRRIMLVAQKTAAKDEPLVSDMFDVGCVSTIL QMLKLPDGTVKVLVEGQQRAQVTSIEDHESHFTSTVTPVPASDGDHKPSEIEALRRAVMQQFDQYVKLNKKIPPEILTSI ASIDDPGRLADTIAAHLPLKLENKQAVLDLADVKERLENLFEQLDREVDILNVDKRIRGRVKRQMEKNQRDFYLNEQVKA IQKELGEGEEGADIEEIEKKIKAAKMPADARKKAESELKKLKLMSPMSAEATVVRNYIEVLTGLPWSKRTKIKHDLANAE EVLNEDHYGLDKVKDRILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGMRDEAEIRGHRRT YIGAMPGKVLQSLNKVGTRNPLFLLDEIDKLGTDFRGDPSSALLEVLDPEQNHKFGDHYVEVDFDLSDVMFVATSNSMNI PPALLDRMEVIRLSGYTEDEKANIAIKYLLPKQMVNNGVKDEELRVEESAVRDVIRYYTREAGVRSLERELSKICRKVVK GLQLKKLEPQVVVTADNLAEYLGVRKHTYGRAEQQNQVGQVVGLAWTEVGGDLLTIEAATMPGKGTITRTGSLGDVMKES VEAARTVVRSRAHRLGIKDEVFEKRDMHIHVPDGATPKDGPSAGAAMTTAFVSALTGIPVRSDVAMTGEITLRGEVTAIG GLKEKLLAALRGGIKTVLIPEENVKDLQEIPDNVKSGLEIIPVKWIDKVLEVALERKPIALTEEEIAASITARENRQAQG STDSVKH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=564, Percent_Identity=45.3900709219858, Blast_Score=506, Evalue=1e-143, Organism=Homo sapiens, GI21396489, Length=661, Percent_Identity=39.4856278366112, Blast_Score=480, Evalue=1e-135, Organism=Escherichia coli, GI1786643, Length=769, Percent_Identity=68.2704811443433, Blast_Score=1067, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=705, Percent_Identity=40, Blast_Score=483, Evalue=1e-136, Organism=Caenorhabditis elegans, GI17556486, Length=541, Percent_Identity=39.9260628465804, Blast_Score=433, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6319449, Length=717, Percent_Identity=40.4463040446304, Blast_Score=511, Evalue=1e-145, Organism=Drosophila melanogaster, GI221513036, Length=629, Percent_Identity=43.2432432432432, Blast_Score=501, Evalue=1e-142, Organism=Drosophila melanogaster, GI24666867, Length=629, Percent_Identity=43.2432432432432, Blast_Score=500, Evalue=1e-141,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 89416; Mature: 89285
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGHTPLPATPIDLPLLPLRDVVVFPHMVIPLFVGRPKSIKALELAMDADRRIMLVAQKT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEEECC AAKDEPLVSDMFDVGCVSTILQMLKLPDGTVKVLVEGQQRAQVTSIEDHESHFTSTVTPV CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCHHHHHHCCCCCCC PASDGDHKPSEIEALRRAVMQQFDQYVKLNKKIPPEILTSIASIDDPGRLADTIAAHLPL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCE KLENKQAVLDLADVKERLENLFEQLDREVDILNVDKRIRGRVKRQMEKNQRDFYLNEQVK EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHH AIQKELGEGEEGADIEEIEKKIKAAKMPADARKKAESELKKLKLMSPMSAEATVVRNYIE HHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VLTGLPWSKRTKIKHDLANAEEVLNEDHYGLDKVKDRILEYLAVQQRVDKVKAPILCLVG HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC PPGVGKTSLGQSIAKATGRKYVRMALGGMRDEAEIRGHRRTYIGAMPGKVLQSLNKVGTR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHCCC NPLFLLDEIDKLGTDFRGDPSSALLEVLDPEQNHKFGDHYVEVDFDLSDVMFVATSNSMN CCEEHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCC IPPALLDRMEVIRLSGYTEDEKANIAIKYLLPKQMVNNGVKDEELRVEESAVRDVIRYYT CCHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHH REAGVRSLERELSKICRKVVKGLQLKKLEPQVVVTADNLAEYLGVRKHTYGRAEQQNQVG HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHH QVVGLAWTEVGGDLLTIEAATMPGKGTITRTGSLGDVMKESVEAARTVVRSRAHRLGIKD HHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHH EVFEKRDMHIHVPDGATPKDGPSAGAAMTTAFVSALTGIPVRSDVAMTGEITLRGEVTAI HHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEC GGLKEKLLAALRGGIKTVLIPEENVKDLQEIPDNVKSGLEIIPVKWIDKVLEVALERKPI CHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCHHHHCCCEEEEHHHHHHHHHHHHCCCCC ALTEEEIAASITARENRQAQGSTDSVKH EECHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SGHTPLPATPIDLPLLPLRDVVVFPHMVIPLFVGRPKSIKALELAMDADRRIMLVAQKT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEEECC AAKDEPLVSDMFDVGCVSTILQMLKLPDGTVKVLVEGQQRAQVTSIEDHESHFTSTVTPV CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCHHHHHHCCCCCCC PASDGDHKPSEIEALRRAVMQQFDQYVKLNKKIPPEILTSIASIDDPGRLADTIAAHLPL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCE KLENKQAVLDLADVKERLENLFEQLDREVDILNVDKRIRGRVKRQMEKNQRDFYLNEQVK EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHH AIQKELGEGEEGADIEEIEKKIKAAKMPADARKKAESELKKLKLMSPMSAEATVVRNYIE HHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VLTGLPWSKRTKIKHDLANAEEVLNEDHYGLDKVKDRILEYLAVQQRVDKVKAPILCLVG HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC PPGVGKTSLGQSIAKATGRKYVRMALGGMRDEAEIRGHRRTYIGAMPGKVLQSLNKVGTR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHCCC NPLFLLDEIDKLGTDFRGDPSSALLEVLDPEQNHKFGDHYVEVDFDLSDVMFVATSNSMN CCEEHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCC IPPALLDRMEVIRLSGYTEDEKANIAIKYLLPKQMVNNGVKDEELRVEESAVRDVIRYYT CCHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHH REAGVRSLERELSKICRKVVKGLQLKKLEPQVVVTADNLAEYLGVRKHTYGRAEQQNQVG HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHH QVVGLAWTEVGGDLLTIEAATMPGKGTITRTGSLGDVMKESVEAARTVVRSRAHRLGIKD HHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHH EVFEKRDMHIHVPDGATPKDGPSAGAAMTTAFVSALTGIPVRSDVAMTGEITLRGEVTAI HHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEC GGLKEKLLAALRGGIKTVLIPEENVKDLQEIPDNVKSGLEIIPVKWIDKVLEVALERKPI CHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCHHHHCCCEEEEHHHHHHHHHHHHCCCCC ALTEEEIAASITARENRQAQGSTDSVKH EECHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8981986; 12620739 [H]