Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is folA [H]
Identifier: 120610135
GI number: 120610135
Start: 1595885
End: 1596382
Strand: Reverse
Name: folA [H]
Synonym: Aave_1448
Alternate gene names: 120610135
Gene position: 1596382-1595885 (Counterclockwise)
Preceding gene: 120610136
Following gene: 120610134
Centisome position: 29.82
GC content: 69.48
Gene sequence:
>498_bases ATGACACTGCGACTCATCTACGCACGGGCCGCCAATGGCGGCATCGGTCTCCACAACGCCATGCCCTGGCACCTGCCCGA AGACCTGGCGCATTTCAAGCAGCTCACGCTGGGCGCCACGGTGGTCATGGGGCGCAAGACCTGGGATTCCCTGCCTGCCC GCTTCCGTCCCCTGCCCGGCCGCACGAACATCGTGGTCACGCGCCAGGCCGGCTGGCACGCGGACGGCGCCCTGTCCGCC TCCAGCCTGGAGCAGGCGGTGGAACTGGCCCGGCCGCATGGCGATACGGTATGGGTGATGGGCGGTGCGCAGATCTACGC CCAGGCCCTTCCGATGGCGGACGGCGTGGAGGTCACCGAAATCCACCGGGATTTCGAAGCGGACGCCTTCGCCCCCGTGC TGGGCCCCGAATGGGAGGAGACCGCGCGCACCCCCGTGCAGACCTCCGCCGGCAGTGCGGCCCTTCCCTTTTCCTTCGTC AGCTACCGGCGCCGCTGA
Upstream 100 bases:
>100_bases TGCTCACGCGCCGCAAATGGCTGCAGTGGGGGATGTATGGCGTCGCAGGCCTGGGAATCGCCATCGGCGTCCTCGCGGCC CTCCACCTCTGAACAATGCC
Downstream 100 bases:
>100_bases AGCCGCCCGCCGGCAAGCTCCGTCCTTCCTCGCATCACTCTCCCTCCTATGAAGCTGGCCACCTGGAACGTCAACTCCCT CTCCATACGGCTGCCCCAGG
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTLRLIYARAANGGIGLHNAMPWHLPEDLAHFKQLTLGATVVMGRKTWDSLPARFRPLPGRTNIVVTRQAGWHADGALSA SSLEQAVELARPHGDTVWVMGGAQIYAQALPMADGVEVTEIHRDFEADAFAPVLGPEWEETARTPVQTSAGSAALPFSFV SYRRR
Sequences:
>Translated_165_residues MTLRLIYARAANGGIGLHNAMPWHLPEDLAHFKQLTLGATVVMGRKTWDSLPARFRPLPGRTNIVVTRQAGWHADGALSA SSLEQAVELARPHGDTVWVMGGAQIYAQALPMADGVEVTEIHRDFEADAFAPVLGPEWEETARTPVQTSAGSAALPFSFV SYRRR >Mature_164_residues TLRLIYARAANGGIGLHNAMPWHLPEDLAHFKQLTLGATVVMGRKTWDSLPARFRPLPGRTNIVVTRQAGWHADGALSAS SLEQAVELARPHGDTVWVMGGAQIYAQALPMADGVEVTEIHRDFEADAFAPVLGPEWEETARTPVQTSAGSAALPFSFVS YRRR
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=152, Percent_Identity=34.2105263157895, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI28827793, Length=146, Percent_Identity=34.2465753424658, Blast_Score=78, Evalue=3e-15, Organism=Escherichia coli, GI1786233, Length=165, Percent_Identity=36.3636363636364, Blast_Score=97, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17505899, Length=181, Percent_Identity=34.2541436464088, Blast_Score=99, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6324810, Length=125, Percent_Identity=32, Blast_Score=81, Evalue=7e-17, Organism=Drosophila melanogaster, GI116008026, Length=155, Percent_Identity=31.6129032258064, Blast_Score=86, Evalue=8e-18, Organism=Drosophila melanogaster, GI24647458, Length=155, Percent_Identity=31.6129032258064, Blast_Score=86, Evalue=8e-18,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18001; Mature: 17869
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRLIYARAANGGIGLHNAMPWHLPEDLAHFKQLTLGATVVMGRKTWDSLPARFRPLPG CEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHCCCHHCCCCCC RTNIVVTRQAGWHADGALSASSLEQAVELARPHGDTVWVMGGAQIYAQALPMADGVEVTE CCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCCCHHH IHRDFEADAFAPVLGPEWEETARTPVQTSAGSAALPFSFVSYRRR HHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure TLRLIYARAANGGIGLHNAMPWHLPEDLAHFKQLTLGATVVMGRKTWDSLPARFRPLPG EEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHCCCHHCCCCCC RTNIVVTRQAGWHADGALSASSLEQAVELARPHGDTVWVMGGAQIYAQALPMADGVEVTE CCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCCCHHH IHRDFEADAFAPVLGPEWEETARTPVQTSAGSAALPFSFVSYRRR HHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6434541 [H]