Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610136
Identifier: 120610136
GI number: 120610136
Start: 1596391
End: 1596981
Strand: Reverse
Name: 120610136
Synonym: Aave_1449
Alternate gene names: NA
Gene position: 1596981-1596391 (Counterclockwise)
Preceding gene: 120610137
Following gene: 120610135
Centisome position: 29.83
GC content: 64.81
Gene sequence:
>591_bases ATGTCTTCCCACGGCTTTCATGTCCATGGGCCGCACGACCACGCTGTCGAGCATGCCGCCCAGCACGCCCATCCCGATGC CGACCATGGCGCCATGACCAACCGCATCGCCATGGCGACGGCCATCATCGCCACGGTGGGTGCCATCTTCTCGTACATGG GCGGCGCCACGCAGGCCAATGCCGGCCTGATCAAGAACGATGCCGCCATCAAAAAAACGGAGGCGGCCAACCAGTGGGCC TATTACCAGTCCAAAAGCACCAAGCAATCGGTCACCGAACTGGCGCGCGACTTGGCACCGGACAACCGCAGGCCGGAGCT GCAGACCCGGCTGGATCGCTACGAGCAGGAGAAAAACGACATCAGGCACAACGCCGAGGCGCTGGAAGCGCAGTCGCTGG CGCTGGATGAACAAAGCGAGCAGCAAATGCACCAGCACCACCGCTGGGCCCAGGCCACCACCATGCTGCAGGTCGCCATC GCGCTGGCCGCCATCGCCCTGCTCACGCGCCGCAAATGGCTGCAGTGGGGGATGTATGGCGTCGCAGGCCTGGGAATCGC CATCGGCGTCCTCGCGGCCCTCCACCTCTGA
Upstream 100 bases:
>100_bases CGAGGATTTCGAAGTGCGCGACTACGCGCACCATCCCGCCATCAAGGCGCCGGTCGCGGTCTGACCATCCCGTTTTCCAA ACGCTTCCAGCTTCCTCCCG
Downstream 100 bases:
>100_bases ACAATGCCATGACACTGCGACTCATCTACGCACGGGCCGCCAATGGCGGCATCGGTCTCCACAACGCCATGCCCTGGCAC CTGCCCGAAGACCTGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Tranmembrane Protein
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSSHGFHVHGPHDHAVEHAAQHAHPDADHGAMTNRIAMATAIIATVGAIFSYMGGATQANAGLIKNDAAIKKTEAANQWA YYQSKSTKQSVTELARDLAPDNRRPELQTRLDRYEQEKNDIRHNAEALEAQSLALDEQSEQQMHQHHRWAQATTMLQVAI ALAAIALLTRRKWLQWGMYGVAGLGIAIGVLAALHL
Sequences:
>Translated_196_residues MSSHGFHVHGPHDHAVEHAAQHAHPDADHGAMTNRIAMATAIIATVGAIFSYMGGATQANAGLIKNDAAIKKTEAANQWA YYQSKSTKQSVTELARDLAPDNRRPELQTRLDRYEQEKNDIRHNAEALEAQSLALDEQSEQQMHQHHRWAQATTMLQVAI ALAAIALLTRRKWLQWGMYGVAGLGIAIGVLAALHL >Mature_195_residues SSHGFHVHGPHDHAVEHAAQHAHPDADHGAMTNRIAMATAIIATVGAIFSYMGGATQANAGLIKNDAAIKKTEAANQWAY YQSKSTKQSVTELARDLAPDNRRPELQTRLDRYEQEKNDIRHNAEALEAQSLALDEQSEQQMHQHHRWAQATTMLQVAIA LAAIALLTRRKWLQWGMYGVAGLGIAIGVLAALHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21522; Mature: 21390
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHGFHVHGPHDHAVEHAAQHAHPDADHGAMTNRIAMATAIIATVGAIFSYMGGATQAN CCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGLIKNDAAIKKTEAANQWAYYQSKSTKQSVTELARDLAPDNRRPELQTRLDRYEQEKND CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IRHNAEALEAQSLALDEQSEQQMHQHHRWAQATTMLQVAIALAAIALLTRRKWLQWGMYG HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGLGIAIGVLAALHL HHHHHHHHHHHHHHCC >Mature Secondary Structure SSHGFHVHGPHDHAVEHAAQHAHPDADHGAMTNRIAMATAIIATVGAIFSYMGGATQAN CCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGLIKNDAAIKKTEAANQWAYYQSKSTKQSVTELARDLAPDNRRPELQTRLDRYEQEKND CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IRHNAEALEAQSLALDEQSEQQMHQHHRWAQATTMLQVAIALAAIALLTRRKWLQWGMYG HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGLGIAIGVLAALHL HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA