Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610130
Identifier: 120610130
GI number: 120610130
Start: 1590470
End: 1590988
Strand: Direct
Name: 120610130
Synonym: Aave_1443
Alternate gene names: NA
Gene position: 1590470-1590988 (Clockwise)
Preceding gene: 120610129
Following gene: 120610131
Centisome position: 29.71
GC content: 69.36
Gene sequence:
>519_bases ATGACTAAAACTCTCACCGTGCTCATGGCGCTGGCCGCCCTGGCGCCGACCGCCTGGTCCCAGGACCGCATCTACCGCTG CGGCAACGAGTACACCAACAACGTGTCCCAGGCCAGAGAGCGGGGCTGCAAGCTCGTGGAAGGCGGGAACGTCACGGTGG TGCAGGGATCCCGGCACTCCGGCGGCGGCGCTGCACACCCGTCTTCCTCGGGAGGCGGCGGTGCACCTGCAGCGTCGCCG TCCAACGCGCCGCGCGTGGACGCCAATGACCAGCGCGCCCGCGATTCCGACGCGCGTGCCATCCTGGAGGCGGAACTGCG CAAAGCGGAAGCCCGGCTGGCGGATCTGACCCGGGAGTACAACAACGGCGAGCCCCAGCGCACGGCACTGGAGCTGCGCA ATCCGCAGGTCTATATGGAGCGGACCGCCGAACTCAAGGCCGCCGTGTCCCGTGCGGAAAGCGACGTGGCCGGCATCAAG CGCGAGCTGGCACGCCTGCCCTCGCCAGCTGGCCGTTGA
Upstream 100 bases:
>100_bases GACCCTCCGGGGCGCGGCGATGCATGGCGGCGGCCGGGCGATTGGGGGATACTTCCGGTCAGCTTCCGCGTGCCGACGGC ATGCCCCGCGAGGATTTTGA
Downstream 100 bases:
>100_bases GCGTGGCCTCGAGCCCTTCCGCGCTCCCTGCCGCGCGTTATGTCGCCCTGGATCTCGTGTCCACGCTGGTGGCCGTGCTG CATCAGGACGGCTCCGTGAT
Product: putative signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTKTLTVLMALAALAPTAWSQDRIYRCGNEYTNNVSQARERGCKLVEGGNVTVVQGSRHSGGGAAHPSSSGGGGAPAASP SNAPRVDANDQRARDSDARAILEAELRKAEARLADLTREYNNGEPQRTALELRNPQVYMERTAELKAAVSRAESDVAGIK RELARLPSPAGR
Sequences:
>Translated_172_residues MTKTLTVLMALAALAPTAWSQDRIYRCGNEYTNNVSQARERGCKLVEGGNVTVVQGSRHSGGGAAHPSSSGGGGAPAASP SNAPRVDANDQRARDSDARAILEAELRKAEARLADLTREYNNGEPQRTALELRNPQVYMERTAELKAAVSRAESDVAGIK RELARLPSPAGR >Mature_171_residues TKTLTVLMALAALAPTAWSQDRIYRCGNEYTNNVSQARERGCKLVEGGNVTVVQGSRHSGGGAAHPSSSGGGGAPAASPS NAPRVDANDQRARDSDARAILEAELRKAEARLADLTREYNNGEPQRTALELRNPQVYMERTAELKAAVSRAESDVAGIKR ELARLPSPAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18297; Mature: 18165
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTLTVLMALAALAPTAWSQDRIYRCGNEYTNNVSQARERGCKLVEGGNVTVVQGSRHS CCHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCEEEECCCEEEEECCCCC GGGAAHPSSSGGGGAPAASPSNAPRVDANDQRARDSDARAILEAELRKAEARLADLTREY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NNGEPQRTALELRNPQVYMERTAELKAAVSRAESDVAGIKRELARLPSPAGR CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TKTLTVLMALAALAPTAWSQDRIYRCGNEYTNNVSQARERGCKLVEGGNVTVVQGSRHS CHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCEEEECCCEEEEECCCCC GGGAAHPSSSGGGGAPAASPSNAPRVDANDQRARDSDARAILEAELRKAEARLADLTREY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NNGEPQRTALELRNPQVYMERTAELKAAVSRAESDVAGIKRELARLPSPAGR CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA