Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is pcm [H]

Identifier: 120610102

GI number: 120610102

Start: 1555553

End: 1556338

Strand: Direct

Name: pcm [H]

Synonym: Aave_1415

Alternate gene names: 120610102

Gene position: 1555553-1556338 (Clockwise)

Preceding gene: 120610101

Following gene: 120610103

Centisome position: 29.06

GC content: 73.41

Gene sequence:

>786_bases
ATGCAGCGGCGGCCCGGTTTTCCCGCCCGTCTCGACATGCCGCCCGCGCCCGGTGCGCCACGCGCTCCGGCGCCCTCGCG
CCCCCCGCTGCCCGGCGGCGCTCCGGCGGCCGGGCCCGTGCCGCACGGCCTGGGCCTGGATTCGGCCGCCGTGCGCGCGC
GCATGGTGCAGCGCCTCGCCGCCGGCGGGATCACGTCACCCGCCGTGCTCCAGGCCATGGGCTCGGTGGAGCGGCACCGT
TTCGTGGACACCGCGCTCGTCAACCAGGCCTACGAGGACACCAGCCTGCCCATCGGGCTCGGGCAGACGATCTCCAAGCC
CAGCATCGTGGCCCGCATGACCGAGCTGCTGCTGGGGGCCGAGGGCGCCCGTGCGGGCGGCCTGGGGCGCGTGCTGGAAA
TCGGCACCGGATGCGGCTACCAGGCCGCGGTGCTCGCCCGGCTGGCGCGGGAGGTGTACACCATCGAGCGGCTGCGCGCG
TTGCATGAGAAGGCCCGCGACAATCTGCGTCCCTGGCGGCTGGCCACCGTGCACCTGATACTGGGCGACGGCATGGTCGG
CTACGCGAAGGGCGCGCCCTATGCCGCCATCATCGCCGCCGCGGGCGGTGAAACCATTCCCGACGCCTGGGTCCAACAGC
TCGCCGTGGGAGGGCGCCTCGTCGCCCCCATGGCCGCGGCGGGCGGGCGGCAGGTCCTCGTCGTGATCGACAGGACTCCC
CACGGGCTTCAGCAGAGCACGTTGGAGGCCGTACATTTTGTCCCCCTAAAATCGGGGATTGCCTGA

Upstream 100 bases:

>100_bases
CCCTGAAAGTGGACCTGACCGACCACGAGGGCCTGGCGTACTGGTCCGACACGGCGGGACGTCTTGCCCAGCCATCGGCC
GAGGCCGCCGGGGCGGTGTG

Downstream 100 bases:

>100_bases
AGGAATTGCTTATGCTGGTATCGCGTGGTCTTGTGACTTGGAGTTCGGTGGCGTTGGCGGTCATGGTGCTGGCCGGCTGC
GGGACCCGCGTCAACAGGGC

Product: protein-L-isoaspartate O-methyltransferase

Products: NA

Alternate protein names: L-isoaspartyl protein carboxyl methyltransferase; Protein L-isoaspartyl methyltransferase; Protein-beta-aspartate methyltransferase; PIMT [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MQRRPGFPARLDMPPAPGAPRAPAPSRPPLPGGAPAAGPVPHGLGLDSAAVRARMVQRLAAGGITSPAVLQAMGSVERHR
FVDTALVNQAYEDTSLPIGLGQTISKPSIVARMTELLLGAEGARAGGLGRVLEIGTGCGYQAAVLARLAREVYTIERLRA
LHEKARDNLRPWRLATVHLILGDGMVGYAKGAPYAAIIAAAGGETIPDAWVQQLAVGGRLVAPMAAAGGRQVLVVIDRTP
HGLQQSTLEAVHFVPLKSGIA

Sequences:

>Translated_261_residues
MQRRPGFPARLDMPPAPGAPRAPAPSRPPLPGGAPAAGPVPHGLGLDSAAVRARMVQRLAAGGITSPAVLQAMGSVERHR
FVDTALVNQAYEDTSLPIGLGQTISKPSIVARMTELLLGAEGARAGGLGRVLEIGTGCGYQAAVLARLAREVYTIERLRA
LHEKARDNLRPWRLATVHLILGDGMVGYAKGAPYAAIIAAAGGETIPDAWVQQLAVGGRLVAPMAAAGGRQVLVVIDRTP
HGLQQSTLEAVHFVPLKSGIA
>Mature_261_residues
MQRRPGFPARLDMPPAPGAPRAPAPSRPPLPGGAPAAGPVPHGLGLDSAAVRARMVQRLAAGGITSPAVLQAMGSVERHR
FVDTALVNQAYEDTSLPIGLGQTISKPSIVARMTELLLGAEGARAGGLGRVLEIGTGCGYQAAVLARLAREVYTIERLRA
LHEKARDNLRPWRLATVHLILGDGMVGYAKGAPYAAIIAAAGGETIPDAWVQQLAVGGRLVAPMAAAGGRQVLVVIDRTP
HGLQQSTLEAVHFVPLKSGIA

Specific function: Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins [H]

COG id: COG2518

COG function: function code O; Protein-L-isoaspartate carboxylmethyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. L- isoaspartyl/D-aspartyl protein methyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI226530908, Length=219, Percent_Identity=32.8767123287671, Blast_Score=93, Evalue=3e-19,
Organism=Escherichia coli, GI1789100, Length=205, Percent_Identity=42.9268292682927, Blast_Score=138, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI71983477, Length=222, Percent_Identity=31.5315315315315, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193207222, Length=220, Percent_Identity=30, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI17981723, Length=209, Percent_Identity=31.5789473684211, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000682 [H]

Pfam domain/function: PF01135 PCMT [H]

EC number: =2.1.1.77 [H]

Molecular weight: Translated: 27067; Mature: 27067

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRPGFPARLDMPPAPGAPRAPAPSRPPLPGGAPAAGPVPHGLGLDSAAVRARMVQRLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AGGITSPAVLQAMGSVERHRFVDTALVNQAYEDTSLPIGLGQTISKPSIVARMTELLLGA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC
EGARAGGLGRVLEIGTGCGYQAAVLARLAREVYTIERLRALHEKARDNLRPWRLATVHLI
CCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHEEEEEE
LGDGMVGYAKGAPYAAIIAAAGGETIPDAWVQQLAVGGRLVAPMAAAGGRQVLVVIDRTP
ECCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCC
HGLQQSTLEAVHFVPLKSGIA
CCHHHHHHHHHHEEHHHCCCC
>Mature Secondary Structure
MQRRPGFPARLDMPPAPGAPRAPAPSRPPLPGGAPAAGPVPHGLGLDSAAVRARMVQRLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AGGITSPAVLQAMGSVERHRFVDTALVNQAYEDTSLPIGLGQTISKPSIVARMTELLLGA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC
EGARAGGLGRVLEIGTGCGYQAAVLARLAREVYTIERLRALHEKARDNLRPWRLATVHLI
CCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHEEEEEE
LGDGMVGYAKGAPYAAIIAAAGGETIPDAWVQQLAVGGRLVAPMAAAGGRQVLVVIDRTP
ECCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCC
HGLQQSTLEAVHFVPLKSGIA
CCHHHHHHHHHHEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA