Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is pcm [H]
Identifier: 120610102
GI number: 120610102
Start: 1555553
End: 1556338
Strand: Direct
Name: pcm [H]
Synonym: Aave_1415
Alternate gene names: 120610102
Gene position: 1555553-1556338 (Clockwise)
Preceding gene: 120610101
Following gene: 120610103
Centisome position: 29.06
GC content: 73.41
Gene sequence:
>786_bases ATGCAGCGGCGGCCCGGTTTTCCCGCCCGTCTCGACATGCCGCCCGCGCCCGGTGCGCCACGCGCTCCGGCGCCCTCGCG CCCCCCGCTGCCCGGCGGCGCTCCGGCGGCCGGGCCCGTGCCGCACGGCCTGGGCCTGGATTCGGCCGCCGTGCGCGCGC GCATGGTGCAGCGCCTCGCCGCCGGCGGGATCACGTCACCCGCCGTGCTCCAGGCCATGGGCTCGGTGGAGCGGCACCGT TTCGTGGACACCGCGCTCGTCAACCAGGCCTACGAGGACACCAGCCTGCCCATCGGGCTCGGGCAGACGATCTCCAAGCC CAGCATCGTGGCCCGCATGACCGAGCTGCTGCTGGGGGCCGAGGGCGCCCGTGCGGGCGGCCTGGGGCGCGTGCTGGAAA TCGGCACCGGATGCGGCTACCAGGCCGCGGTGCTCGCCCGGCTGGCGCGGGAGGTGTACACCATCGAGCGGCTGCGCGCG TTGCATGAGAAGGCCCGCGACAATCTGCGTCCCTGGCGGCTGGCCACCGTGCACCTGATACTGGGCGACGGCATGGTCGG CTACGCGAAGGGCGCGCCCTATGCCGCCATCATCGCCGCCGCGGGCGGTGAAACCATTCCCGACGCCTGGGTCCAACAGC TCGCCGTGGGAGGGCGCCTCGTCGCCCCCATGGCCGCGGCGGGCGGGCGGCAGGTCCTCGTCGTGATCGACAGGACTCCC CACGGGCTTCAGCAGAGCACGTTGGAGGCCGTACATTTTGTCCCCCTAAAATCGGGGATTGCCTGA
Upstream 100 bases:
>100_bases CCCTGAAAGTGGACCTGACCGACCACGAGGGCCTGGCGTACTGGTCCGACACGGCGGGACGTCTTGCCCAGCCATCGGCC GAGGCCGCCGGGGCGGTGTG
Downstream 100 bases:
>100_bases AGGAATTGCTTATGCTGGTATCGCGTGGTCTTGTGACTTGGAGTTCGGTGGCGTTGGCGGTCATGGTGCTGGCCGGCTGC GGGACCCGCGTCAACAGGGC
Product: protein-L-isoaspartate O-methyltransferase
Products: NA
Alternate protein names: L-isoaspartyl protein carboxyl methyltransferase; Protein L-isoaspartyl methyltransferase; Protein-beta-aspartate methyltransferase; PIMT [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MQRRPGFPARLDMPPAPGAPRAPAPSRPPLPGGAPAAGPVPHGLGLDSAAVRARMVQRLAAGGITSPAVLQAMGSVERHR FVDTALVNQAYEDTSLPIGLGQTISKPSIVARMTELLLGAEGARAGGLGRVLEIGTGCGYQAAVLARLAREVYTIERLRA LHEKARDNLRPWRLATVHLILGDGMVGYAKGAPYAAIIAAAGGETIPDAWVQQLAVGGRLVAPMAAAGGRQVLVVIDRTP HGLQQSTLEAVHFVPLKSGIA
Sequences:
>Translated_261_residues MQRRPGFPARLDMPPAPGAPRAPAPSRPPLPGGAPAAGPVPHGLGLDSAAVRARMVQRLAAGGITSPAVLQAMGSVERHR FVDTALVNQAYEDTSLPIGLGQTISKPSIVARMTELLLGAEGARAGGLGRVLEIGTGCGYQAAVLARLAREVYTIERLRA LHEKARDNLRPWRLATVHLILGDGMVGYAKGAPYAAIIAAAGGETIPDAWVQQLAVGGRLVAPMAAAGGRQVLVVIDRTP HGLQQSTLEAVHFVPLKSGIA >Mature_261_residues MQRRPGFPARLDMPPAPGAPRAPAPSRPPLPGGAPAAGPVPHGLGLDSAAVRARMVQRLAAGGITSPAVLQAMGSVERHR FVDTALVNQAYEDTSLPIGLGQTISKPSIVARMTELLLGAEGARAGGLGRVLEIGTGCGYQAAVLARLAREVYTIERLRA LHEKARDNLRPWRLATVHLILGDGMVGYAKGAPYAAIIAAAGGETIPDAWVQQLAVGGRLVAPMAAAGGRQVLVVIDRTP HGLQQSTLEAVHFVPLKSGIA
Specific function: Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins [H]
COG id: COG2518
COG function: function code O; Protein-L-isoaspartate carboxylmethyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. L- isoaspartyl/D-aspartyl protein methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI226530908, Length=219, Percent_Identity=32.8767123287671, Blast_Score=93, Evalue=3e-19, Organism=Escherichia coli, GI1789100, Length=205, Percent_Identity=42.9268292682927, Blast_Score=138, Evalue=4e-34, Organism=Caenorhabditis elegans, GI71983477, Length=222, Percent_Identity=31.5315315315315, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193207222, Length=220, Percent_Identity=30, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI17981723, Length=209, Percent_Identity=31.5789473684211, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000682 [H]
Pfam domain/function: PF01135 PCMT [H]
EC number: =2.1.1.77 [H]
Molecular weight: Translated: 27067; Mature: 27067
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRPGFPARLDMPPAPGAPRAPAPSRPPLPGGAPAAGPVPHGLGLDSAAVRARMVQRLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AGGITSPAVLQAMGSVERHRFVDTALVNQAYEDTSLPIGLGQTISKPSIVARMTELLLGA HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC EGARAGGLGRVLEIGTGCGYQAAVLARLAREVYTIERLRALHEKARDNLRPWRLATVHLI CCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHEEEEEE LGDGMVGYAKGAPYAAIIAAAGGETIPDAWVQQLAVGGRLVAPMAAAGGRQVLVVIDRTP ECCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCC HGLQQSTLEAVHFVPLKSGIA CCHHHHHHHHHHEEHHHCCCC >Mature Secondary Structure MQRRPGFPARLDMPPAPGAPRAPAPSRPPLPGGAPAAGPVPHGLGLDSAAVRARMVQRLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AGGITSPAVLQAMGSVERHRFVDTALVNQAYEDTSLPIGLGQTISKPSIVARMTELLLGA HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC EGARAGGLGRVLEIGTGCGYQAAVLARLAREVYTIERLRALHEKARDNLRPWRLATVHLI CCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHEEEEEE LGDGMVGYAKGAPYAAIIAAAGGETIPDAWVQQLAVGGRLVAPMAAAGGRQVLVVIDRTP ECCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCC HGLQQSTLEAVHFVPLKSGIA CCHHHHHHHHHHEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA