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The map label for this gene is yiiZ [H]

Identifier: 120610096

GI number: 120610096

Start: 1547240

End: 1548292

Strand: Reverse

Name: yiiZ [H]

Synonym: Aave_1409

Alternate gene names: 120610096

Gene position: 1548292-1547240 (Counterclockwise)

Preceding gene: 120610097

Following gene: 120610094

Centisome position: 28.93

GC content: 65.72

Gene sequence:

>1053_bases
ATGGCGACACGGCGGCTGCCTCCGCAGCCAGTCTGGGCCACGAACCAATTTTCGCGAGGACGGGGAAAACACATGGGCAA
GCATTTCTGGGCAGCATTCGCCACCGTGCTGGCGTTCTGGGCAACGCCCGCCACCAGCCAGACCACCGCGCCGCTGCGGG
CATGGAACATCCATCCCGACGGCTATCCGGTCACCGAGGCGATGAAGAGCTTCGCCGCCGAAGTGCAGGCCGGCACCCAG
GGCCGCCACCAGATCCAGATCTTCTCCGATGCCGTCCTGGGCGACCAGTCCAAGGCAGTGCAGATGCTCAAGGCCGGCGA
GATCGATGTCGCGGAGTTCAACTTGGGCCCGCTCGCGGAAGCGGTGCCGCCGCTGCAGGCCTTCAACCTGCCCTTCCTGT
TCAGCAGCGCCACGCACATGTTCCGCTACCTGGACGGCCCGATGGGCGAGCGGCTCGCGGAAAAGCTCAAGGCGTCCGGC
TACGTCGTGCTGGGCTGGTACAACGGCGGCGCCCGCTCGTTCTATTGCGCCGACAAGCCCATCACCCGCCGCGAGGACCT
GGCGGGGCTGCGCATCCGCGTGCAGCAGGTCGATTCGCACATCGAGATGGTGAAGCTGCTGGGCGCCACGCCGGTGGTCG
TGCCCTACAAGGAAGTGCCTGAGAGCTTCCGCGCCGGCAGGATCGACTGCGCGGAAGGCAATATCGTCTCGTACGAGTCC
ACCGGCCAGTACAAGCTGGCGAAATACATGCTGCTGGACCAGCACATCATCGCGCCCGAGGCGCTGGTGGTGTCCACCCA
GCTGTGGAACCGCCTGAACGAGGAGGACCGCAAGGTGTTCCTGAAGGCCGGCAAGGACTCAGCGCTGCTGATGCGCGGCC
TCTGGGAAAAGCGGGAACTCGCGGCCCGCACCGCCCTGGCCAAGGAAGGCGTGCAGTTCGTCCACGTGGCAGACTTCTCG
CCCTACGTGCGCCGCATGGCGCCGCTCTACAAGAAGTACACCGACAACCCCGATGTGCGGGGCGACCTGCTCACCATCAT
CTCCAACCAGTGA

Upstream 100 bases:

>100_bases
AGCGCCAAGCCCCCGCGCGGCGGGGCTGTGGTTTCGGCGGTGCATGCCCGCCTGGAAATCGCTTGCTTCCACGGAAGAGC
CACCCGGAGAATGCTGGGCG

Downstream 100 bases:

>100_bases
CGGGTGGGCTCAGCCGGGCCCGAATCCCAGCGACATGCCCGCGCCGCCGCGTGCCCGCGCACCGGGCATCGCGCGCAGCG
CTGCCGGTGGCGCGCCAGTG

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MATRRLPPQPVWATNQFSRGRGKHMGKHFWAAFATVLAFWATPATSQTTAPLRAWNIHPDGYPVTEAMKSFAAEVQAGTQ
GRHQIQIFSDAVLGDQSKAVQMLKAGEIDVAEFNLGPLAEAVPPLQAFNLPFLFSSATHMFRYLDGPMGERLAEKLKASG
YVVLGWYNGGARSFYCADKPITRREDLAGLRIRVQQVDSHIEMVKLLGATPVVVPYKEVPESFRAGRIDCAEGNIVSYES
TGQYKLAKYMLLDQHIIAPEALVVSTQLWNRLNEEDRKVFLKAGKDSALLMRGLWEKRELAARTALAKEGVQFVHVADFS
PYVRRMAPLYKKYTDNPDVRGDLLTIISNQ

Sequences:

>Translated_350_residues
MATRRLPPQPVWATNQFSRGRGKHMGKHFWAAFATVLAFWATPATSQTTAPLRAWNIHPDGYPVTEAMKSFAAEVQAGTQ
GRHQIQIFSDAVLGDQSKAVQMLKAGEIDVAEFNLGPLAEAVPPLQAFNLPFLFSSATHMFRYLDGPMGERLAEKLKASG
YVVLGWYNGGARSFYCADKPITRREDLAGLRIRVQQVDSHIEMVKLLGATPVVVPYKEVPESFRAGRIDCAEGNIVSYES
TGQYKLAKYMLLDQHIIAPEALVVSTQLWNRLNEEDRKVFLKAGKDSALLMRGLWEKRELAARTALAKEGVQFVHVADFS
PYVRRMAPLYKKYTDNPDVRGDLLTIISNQ
>Mature_349_residues
ATRRLPPQPVWATNQFSRGRGKHMGKHFWAAFATVLAFWATPATSQTTAPLRAWNIHPDGYPVTEAMKSFAAEVQAGTQG
RHQIQIFSDAVLGDQSKAVQMLKAGEIDVAEFNLGPLAEAVPPLQAFNLPFLFSSATHMFRYLDGPMGERLAEKLKASGY
VVLGWYNGGARSFYCADKPITRREDLAGLRIRVQQVDSHIEMVKLLGATPVVVPYKEVPESFRAGRIDCAEGNIVSYEST
GQYKLAKYMLLDQHIIAPEALVVSTQLWNRLNEEDRKVFLKAGKDSALLMRGLWEKRELAARTALAKEGVQFVHVADFSP
YVRRMAPLYKKYTDNPDVRGDLLTIISNQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=252, Percent_Identity=25, Blast_Score=104, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 39099; Mature: 38968

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRRLPPQPVWATNQFSRGRGKHMGKHFWAAFATVLAFWATPATSQTTAPLRAWNIHPD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC
GYPVTEAMKSFAAEVQAGTQGRHQIQIFSDAVLGDQSKAVQMLKAGEIDVAEFNLGPLAE
CCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCCEEEECCCCCHHH
AVPPLQAFNLPFLFSSATHMFRYLDGPMGERLAEKLKASGYVVLGWYNGGARSFYCADKP
HCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEEECCCCCEEEECCCC
ITRREDLAGLRIRVQQVDSHIEMVKLLGATPVVVPYKEVPESFRAGRIDCAEGNIVSYES
CCCHHCCCHHEEHHHHHHHHHHHHHHHCCCCEEECHHHCCHHHHCCCEEECCCCEEEECC
TGQYKLAKYMLLDQHIIAPEALVVSTQLWNRLNEEDRKVFLKAGKDSALLMRGLWEKREL
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHEEEEECCCCHHHHHHHHHHHHHH
AARTALAKEGVQFVHVADFSPYVRRMAPLYKKYTDNPDVRGDLLTIISNQ
HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
ATRRLPPQPVWATNQFSRGRGKHMGKHFWAAFATVLAFWATPATSQTTAPLRAWNIHPD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC
GYPVTEAMKSFAAEVQAGTQGRHQIQIFSDAVLGDQSKAVQMLKAGEIDVAEFNLGPLAE
CCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCCEEEECCCCCHHH
AVPPLQAFNLPFLFSSATHMFRYLDGPMGERLAEKLKASGYVVLGWYNGGARSFYCADKP
HCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEEECCCCCEEEECCCC
ITRREDLAGLRIRVQQVDSHIEMVKLLGATPVVVPYKEVPESFRAGRIDCAEGNIVSYES
CCCHHCCCHHEEHHHHHHHHHHHHHHHCCCCEEECHHHCCHHHHCCCEEECCCCEEEECC
TGQYKLAKYMLLDQHIIAPEALVVSTQLWNRLNEEDRKVFLKAGKDSALLMRGLWEKREL
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHEEEEECCCCHHHHHHHHHHHHHH
AARTALAKEGVQFVHVADFSPYVRRMAPLYKKYTDNPDVRGDLLTIISNQ
HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]