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The map label for this gene is tse [H]

Identifier: 120610092

GI number: 120610092

Start: 1539495

End: 1541141

Strand: Reverse

Name: tse [H]

Synonym: Aave_1405

Alternate gene names: 120610092

Gene position: 1541141-1539495 (Counterclockwise)

Preceding gene: 120610093

Following gene: 120610087

Centisome position: 28.79

GC content: 69.82

Gene sequence:

>1647_bases
ATGAGCGAAAAAACCACCTTCTTCGGCAACCTGCGGATCGGCTACCGCATCGGCCTGGCCTTCCTCGCGGTGATCGCGGT
ACTGGCGCTGCTGGCCGCCCTGTCGCTCGGCGCGCTGGGCAACGTGAACCAGGCCCTCACCAAGGTCACGCGCGACGCCT
ATCCGAAGGTCAAGCTGCTTTCGCAGATCACCAACGAAGCGGATGCCCAGGCCCGGTACACGCGCAACATGCTGATCTTC
GACAACCCGGACATCCGCGCGCAGGAAACCCGCCGCATCCAGGAGAGCCGGGAGACCGTCACCGCCCTGTTCTCGCAACT
GTCGCAACTGGTCCGCTCCTCCACGGGCGTCGAGATGCTGGAGGCCTGCCAGACCACGCGCGCAAACTACATGCGCGAAC
TGGACCGGCTGCTGCAACTCATGCGCGACAACCATTCCGAGCAAGCCCGGGATCTGCTGGAAACCAGCCTGCGCCCCGCC
CAGCAGAAATTCCTGGAAGCCGTCACCCGCCTGTCCGAGCACCAGCAGAAGGTCATGGCCGAAGACAGCGACCGGGCGGA
CGCGCAGGTGAGCACGGGCCGCGTCACCGTGATCGCGATCGGCGCGCTGGCCGCCGTGCTGGCCATGGCGCTGTGCTGGC
TTATCGCCCGCTCCATCACCCGCCCGCTGCACACCGCCGTGCAGGTGGCCGAGGCCGTGGCCGGCGGCGACCTGACGTCG
CACATCCCCACGGGACGGCGCGACGAGGTGGGCCAGTTGCTCTCGGCCCTGGCGCGCATGAACGACAGCCTGGTGCGCAT
CGTGGGCAGCGTGCGCGCGGGCTCCGACTCCATCGCCACCGGCACCGTGCAGATCGCCAACGGCAATGCCGACCTGAGCC
AGCGCACGGAAGAACAGGCCAGCAACCTGGAAGAAACCGCCGCCTCGATGGAGGAACTGACCTCCACCGTGGAGCAGAAC
GCCGCATCGGCCCGCCGGGCCCACCAACTGGTATCGGGCGCCTCGTCCGTCGCGGCCCAGGGCGGCGCGGTGGTGCAGGA
CGTGGTGCGCACGATGGACTCGATCCGCCAGGGCTCGGACCGCATGGCCGACATCATCGGCACCATCAACGGCATCGCCT
TCCAGACCAACATCCTGGCGCTCAACGCCGCGGTGGAAGCCGCCCGCGCGGGCGAACAGGGCCGTGGCTTCGCCGTGGTG
GCGACCGAGGTGCGCAGCCTCGCGCAACGCAGCGCACAGGCCGCCGCGGAGATCAAGGGCCTGATCCAAAACAGCGTGTC
GCGCGTGAACGCCGGCAGCGAACTCGTGGCCCAGGCCGGCCGCACGATGGAAGACATCGTGACCCAGGTGGCCGAGGTGT
CCACCCTGGTCGCGGAAATCAGCGCCGCCAGCGCGGAGCAATCCAGCGGCATCGGCCAGGTGGGCGACGCCGTGCAGCAG
CTGGACCAGGTCACGCAGCAGAACGCCGCGCTGGTGGAAGAAAGCGCCGCGGCCGCCGACAGCCTGAAGTTCCAGGCGGA
AACGCTGGCGCGCACCGTGGCGCAGTTCCGGCTGCCGCCGGGTGCGGACGGGGCGGGCGCCACGGCAGCCCCGGCACGGC
GCGACCCTGCGGGCGGCACGGGCGGGCTGCTGCTGGCAGCGGCCTGA

Upstream 100 bases:

>100_bases
CTCGACCATGAAGCCGTTCAACGGCCACTCGCGGGCACCCATCACACGGGAGGTGCCGGGAGGCCCCGCCCGTCCCTGCC
TGTCCTACCCTAATCCCGCC

Downstream 100 bases:

>100_bases
GTGGCGGAGCGGTCCCGGCCGGGGTCGCTCATCGCTTCATGGAGGCGAATGGCGGACTTGCTCGTTCACCCACTCCGGGC
TCTTGCCCTTCACGCACAAC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MSEKTTFFGNLRIGYRIGLAFLAVIAVLALLAALSLGALGNVNQALTKVTRDAYPKVKLLSQITNEADAQARYTRNMLIF
DNPDIRAQETRRIQESRETVTALFSQLSQLVRSSTGVEMLEACQTTRANYMRELDRLLQLMRDNHSEQARDLLETSLRPA
QQKFLEAVTRLSEHQQKVMAEDSDRADAQVSTGRVTVIAIGALAAVLAMALCWLIARSITRPLHTAVQVAEAVAGGDLTS
HIPTGRRDEVGQLLSALARMNDSLVRIVGSVRAGSDSIATGTVQIANGNADLSQRTEEQASNLEETAASMEELTSTVEQN
AASARRAHQLVSGASSVAAQGGAVVQDVVRTMDSIRQGSDRMADIIGTINGIAFQTNILALNAAVEAARAGEQGRGFAVV
ATEVRSLAQRSAQAAAEIKGLIQNSVSRVNAGSELVAQAGRTMEDIVTQVAEVSTLVAEISAASAEQSSGIGQVGDAVQQ
LDQVTQQNAALVEESAAAADSLKFQAETLARTVAQFRLPPGADGAGATAAPARRDPAGGTGGLLLAAA

Sequences:

>Translated_548_residues
MSEKTTFFGNLRIGYRIGLAFLAVIAVLALLAALSLGALGNVNQALTKVTRDAYPKVKLLSQITNEADAQARYTRNMLIF
DNPDIRAQETRRIQESRETVTALFSQLSQLVRSSTGVEMLEACQTTRANYMRELDRLLQLMRDNHSEQARDLLETSLRPA
QQKFLEAVTRLSEHQQKVMAEDSDRADAQVSTGRVTVIAIGALAAVLAMALCWLIARSITRPLHTAVQVAEAVAGGDLTS
HIPTGRRDEVGQLLSALARMNDSLVRIVGSVRAGSDSIATGTVQIANGNADLSQRTEEQASNLEETAASMEELTSTVEQN
AASARRAHQLVSGASSVAAQGGAVVQDVVRTMDSIRQGSDRMADIIGTINGIAFQTNILALNAAVEAARAGEQGRGFAVV
ATEVRSLAQRSAQAAAEIKGLIQNSVSRVNAGSELVAQAGRTMEDIVTQVAEVSTLVAEISAASAEQSSGIGQVGDAVQQ
LDQVTQQNAALVEESAAAADSLKFQAETLARTVAQFRLPPGADGAGATAAPARRDPAGGTGGLLLAAA
>Mature_547_residues
SEKTTFFGNLRIGYRIGLAFLAVIAVLALLAALSLGALGNVNQALTKVTRDAYPKVKLLSQITNEADAQARYTRNMLIFD
NPDIRAQETRRIQESRETVTALFSQLSQLVRSSTGVEMLEACQTTRANYMRELDRLLQLMRDNHSEQARDLLETSLRPAQ
QKFLEAVTRLSEHQQKVMAEDSDRADAQVSTGRVTVIAIGALAAVLAMALCWLIARSITRPLHTAVQVAEAVAGGDLTSH
IPTGRRDEVGQLLSALARMNDSLVRIVGSVRAGSDSIATGTVQIANGNADLSQRTEEQASNLEETAASMEELTSTVEQNA
ASARRAHQLVSGASSVAAQGGAVVQDVVRTMDSIRQGSDRMADIIGTINGIAFQTNILALNAAVEAARAGEQGRGFAVVA
TEVRSLAQRSAQAAAEIKGLIQNSVSRVNAGSELVAQAGRTMEDIVTQVAEVSTLVAEISAASAEQSSGIGQVGDAVQQL
DQVTQQNAALVEESAAAADSLKFQAETLARTVAQFRLPPGADGAGATAAPARRDPAGGTGGLLLAAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=324, Percent_Identity=54.320987654321, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI2367378, Length=354, Percent_Identity=53.3898305084746, Blast_Score=295, Evalue=6e-81,
Organism=Escherichia coli, GI1788195, Length=327, Percent_Identity=55.3516819571865, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1788194, Length=376, Percent_Identity=46.8085106382979, Blast_Score=281, Evalue=1e-76,
Organism=Escherichia coli, GI1789453, Length=317, Percent_Identity=44.1640378548896, Blast_Score=224, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57735; Mature: 57604

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKTTFFGNLRIGYRIGLAFLAVIAVLALLAALSLGALGNVNQALTKVTRDAYPKVKLL
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH
SQITNEADAQARYTRNMLIFDNPDIRAQETRRIQESRETVTALFSQLSQLVRSSTGVEML
HHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EACQTTRANYMRELDRLLQLMRDNHSEQARDLLETSLRPAQQKFLEAVTRLSEHQQKVMA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
EDSDRADAQVSTGRVTVIAIGALAAVLAMALCWLIARSITRPLHTAVQVAEAVAGGDLTS
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
HIPTGRRDEVGQLLSALARMNDSLVRIVGSVRAGSDSIATGTVQIANGNADLSQRTEEQA
CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHH
SNLEETAASMEELTSTVEQNAASARRAHQLVSGASSVAAQGGAVVQDVVRTMDSIRQGSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH
RMADIIGTINGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSAQAAAEIKG
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
LIQNSVSRVNAGSELVAQAGRTMEDIVTQVAEVSTLVAEISAASAEQSSGIGQVGDAVQQ
HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDQVTQQNAALVEESAAAADSLKFQAETLARTVAQFRLPPGADGAGATAAPARRDPAGGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GGLLLAAA
CCEEEECC
>Mature Secondary Structure 
SEKTTFFGNLRIGYRIGLAFLAVIAVLALLAALSLGALGNVNQALTKVTRDAYPKVKLL
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH
SQITNEADAQARYTRNMLIFDNPDIRAQETRRIQESRETVTALFSQLSQLVRSSTGVEML
HHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EACQTTRANYMRELDRLLQLMRDNHSEQARDLLETSLRPAQQKFLEAVTRLSEHQQKVMA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
EDSDRADAQVSTGRVTVIAIGALAAVLAMALCWLIARSITRPLHTAVQVAEAVAGGDLTS
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
HIPTGRRDEVGQLLSALARMNDSLVRIVGSVRAGSDSIATGTVQIANGNADLSQRTEEQA
CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHH
SNLEETAASMEELTSTVEQNAASARRAHQLVSGASSVAAQGGAVVQDVVRTMDSIRQGSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH
RMADIIGTINGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSAQAAAEIKG
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
LIQNSVSRVNAGSELVAQAGRTMEDIVTQVAEVSTLVAEISAASAEQSSGIGQVGDAVQQ
HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDQVTQQNAALVEESAAAADSLKFQAETLARTVAQFRLPPGADGAGATAAPARRDPAGGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GGLLLAAA
CCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]