Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610091
Identifier: 120610091
GI number: 120610091
Start: 1538910
End: 1539458
Strand: Direct
Name: 120610091
Synonym: Aave_1404
Alternate gene names: NA
Gene position: 1538910-1539458 (Clockwise)
Preceding gene: 120610090
Following gene: 120610095
Centisome position: 28.75
GC content: 62.66
Gene sequence:
>549_bases ATGGGCTGGCTTGCTTTCCCGCATGTTCACCGGGCCCTCTGCCGTCAACCCACCAGACCCGAAATGCATGACATTCCCGC GCTGCGTAAAACCATGCTTTGGAGCACGCCGCTATTTATCGGTATCTCGGCGAGCTGCGTGTGGGCCACCTTGCATGGAG TCGTGCCGGTGTTCCAGGGTATCGCGGCAAGGGCTCCGGTCGTCCGGATTGCGCCCGCTGCCCAGCTGGCTCCGTTCGTC GCCGTCGTCTGCATCATGGCCATCGTGCTCGGCGCCATGCGCGTGGCGCTGTGCCGTGAAGCCGCGATTGCGAAGTTCGA GCGCGCTTTCACCATCGCCGTGCTCGCCAGCGGCTTGGTGATGCTGCTGATCCCTGTGACCTCATTCGTCCAGCGCCTGT ACATGCCGAGCATTGGCTATGCGGCGTGCTACGAACTGCAGGGCAACCCGACCCTCTGGTTCACGGATTGGGTGAAAGAT CCTGCGTTGTGCGTGAAGGGCAAGAGCCCGGAGTGGGTGAACGAGCAAGTCCGCCATTCGCCTCCATGA
Upstream 100 bases:
>100_bases CGGCATGGTGCGTAAAGGGCAAGAGCCTGGATTGGGTCAACGAGCAGGCGAGGGCGCCCGCACCGCATGGGGTTCCCTGA ATCGCGTAGCGGAGCAAGGG
Downstream 100 bases:
>100_bases AGCGATGAGCGACCCCGGCCGGGACCGCTCCGCCACTCAGGCCGCTGCCAGCAGCAGCCCGCCCGTGCCGCCCGCAGGGT CGCGCCGTGCCGGGGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MGWLAFPHVHRALCRQPTRPEMHDIPALRKTMLWSTPLFIGISASCVWATLHGVVPVFQGIAARAPVVRIAPAAQLAPFV AVVCIMAIVLGAMRVALCREAAIAKFERAFTIAVLASGLVMLLIPVTSFVQRLYMPSIGYAACYELQGNPTLWFTDWVKD PALCVKGKSPEWVNEQVRHSPP
Sequences:
>Translated_182_residues MGWLAFPHVHRALCRQPTRPEMHDIPALRKTMLWSTPLFIGISASCVWATLHGVVPVFQGIAARAPVVRIAPAAQLAPFV AVVCIMAIVLGAMRVALCREAAIAKFERAFTIAVLASGLVMLLIPVTSFVQRLYMPSIGYAACYELQGNPTLWFTDWVKD PALCVKGKSPEWVNEQVRHSPP >Mature_181_residues GWLAFPHVHRALCRQPTRPEMHDIPALRKTMLWSTPLFIGISASCVWATLHGVVPVFQGIAARAPVVRIAPAAQLAPFVA VVCIMAIVLGAMRVALCREAAIAKFERAFTIAVLASGLVMLLIPVTSFVQRLYMPSIGYAACYELQGNPTLWFTDWVKDP ALCVKGKSPEWVNEQVRHSPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20002; Mature: 19871
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWLAFPHVHRALCRQPTRPEMHDIPALRKTMLWSTPLFIGISASCVWATLHGVVPVFQG CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHHHHH IAARAPVVRIAPAAQLAPFVAVVCIMAIVLGAMRVALCREAAIAKFERAFTIAVLASGLV HHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLIPVTSFVQRLYMPSIGYAACYELQGNPTLWFTDWVKDPALCVKGKSPEWVNEQVRHS HHHHHHHHHHHHHHCCCCCHHEEEEECCCCCEEEECCCCCCCEEEECCCCHHHHHHHCCC PP CC >Mature Secondary Structure GWLAFPHVHRALCRQPTRPEMHDIPALRKTMLWSTPLFIGISASCVWATLHGVVPVFQG CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHHHHH IAARAPVVRIAPAAQLAPFVAVVCIMAIVLGAMRVALCREAAIAKFERAFTIAVLASGLV HHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLIPVTSFVQRLYMPSIGYAACYELQGNPTLWFTDWVKDPALCVKGKSPEWVNEQVRHS HHHHHHHHHHHHHHCCCCCHHEEEEECCCCCEEEECCCCCCCEEEECCCCHHHHHHHCCC PP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA