Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610088
Identifier: 120610088
GI number: 120610088
Start: 1536828
End: 1537775
Strand: Direct
Name: 120610088
Synonym: Aave_1401
Alternate gene names: NA
Gene position: 1536828-1537775 (Clockwise)
Preceding gene: 120610084
Following gene: 120610089
Centisome position: 28.71
GC content: 60.76
Gene sequence:
>948_bases ATGAGCGCGGAGCTCGCAGTGACGTTTTTCAATATGGGCTATGCCCAATCCGTGGCGCAGTCCATGGAGCAGAACCGGGT GGATGTGCTGGTGCTCACCCAGGGCCAGTACATGGGCATCCTGCAGGACAAGGCCCGGAACCACCCGGCGCTGGAATTCA GCCTGCGCAAGATCCTCGCCAGTTCAACATTCGGCCAGTACTGGCAGCACACCTTCAGCCCCAACGCCAGCGAGCCGTGG GTGGGGCCGGCGGCGCAAGGCGCCAACGATGCGATCGCCATCACCCGCACGCTGAATGCGATCGGCATGTCGGGCATCAC CAGCTACGTGAAGACCACCGCGACCGGCACCTACATCATCATCAAGGGCTACTCGGCGCGCCGCAGTTCCGCACTGCAGG GCACGCGCTACCTCGCCACGCATCCGAAGATGATCCAGCTGGGGCTGGGCATGAAGAGCCTGCAGGGCATTGCCAAGGGC GGGTTCATCCTGGGCGTGGTCGTCTCCAGCGGCATCGAGTTGATGGACTTCATGTTCAACAATGAGAAGACCATGTATGA CCTGGTGGGTGGGATCGGGGTGGAGGCGGTGAAGGGTGGGTTGGGGGCGTTGGTGGCTTATTCTGCGGCTGCTGCTTTCA GTGGCGTCACGACAATCGCCGTAGCGCCCTTGGTTGTCATGGCCGTGGTCGCAGTGGTTGCCGGTATCGGACTCAATCAC CTGGACAGCCGATTCGGTGTGAAAGGCAAGGTGATCGCGGGCCTCAAGATGGTTCCGGAGCAGGCTTCGCAAGGCTTGTA CTACATCGACACACAATCCCAAGCGTGGTTGGACGATCTTCGATCCGCGATGGAGCAAAGAAAAGAAGAACTGAGCCGCT CCATCGAGCGTGGCATGAAGGAGTGGTTCTGCCGAATAAGCTGCGTGCTCCATCACGCGCCTCACTGA
Upstream 100 bases:
>100_bases TCCTGGAAAACGTCGTTGGGTTAACGCATTGTTGCAAGCGAGCGGAGTGGGTGAACCTAGCATTCGCCCCCATCGAAAAC GCGACAGCAGGGGAGGAACC
Downstream 100 bases:
>100_bases CCTGATCACATCGCCAAGTCATCCATGCACGACATCCATCAAATCCGAAAGCTTATTCGGTGGGGCATTCCGCTGTATCT CGGGCTCGTGGCAGGCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSAELAVTFFNMGYAQSVAQSMEQNRVDVLVLTQGQYMGILQDKARNHPALEFSLRKILASSTFGQYWQHTFSPNASEPW VGPAAQGANDAIAITRTLNAIGMSGITSYVKTTATGTYIIIKGYSARRSSALQGTRYLATHPKMIQLGLGMKSLQGIAKG GFILGVVVSSGIELMDFMFNNEKTMYDLVGGIGVEAVKGGLGALVAYSAAAAFSGVTTIAVAPLVVMAVVAVVAGIGLNH LDSRFGVKGKVIAGLKMVPEQASQGLYYIDTQSQAWLDDLRSAMEQRKEELSRSIERGMKEWFCRISCVLHHAPH
Sequences:
>Translated_315_residues MSAELAVTFFNMGYAQSVAQSMEQNRVDVLVLTQGQYMGILQDKARNHPALEFSLRKILASSTFGQYWQHTFSPNASEPW VGPAAQGANDAIAITRTLNAIGMSGITSYVKTTATGTYIIIKGYSARRSSALQGTRYLATHPKMIQLGLGMKSLQGIAKG GFILGVVVSSGIELMDFMFNNEKTMYDLVGGIGVEAVKGGLGALVAYSAAAAFSGVTTIAVAPLVVMAVVAVVAGIGLNH LDSRFGVKGKVIAGLKMVPEQASQGLYYIDTQSQAWLDDLRSAMEQRKEELSRSIERGMKEWFCRISCVLHHAPH >Mature_314_residues SAELAVTFFNMGYAQSVAQSMEQNRVDVLVLTQGQYMGILQDKARNHPALEFSLRKILASSTFGQYWQHTFSPNASEPWV GPAAQGANDAIAITRTLNAIGMSGITSYVKTTATGTYIIIKGYSARRSSALQGTRYLATHPKMIQLGLGMKSLQGIAKGG FILGVVVSSGIELMDFMFNNEKTMYDLVGGIGVEAVKGGLGALVAYSAAAAFSGVTTIAVAPLVVMAVVAVVAGIGLNHL DSRFGVKGKVIAGLKMVPEQASQGLYYIDTQSQAWLDDLRSAMEQRKEELSRSIERGMKEWFCRISCVLHHAPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33878; Mature: 33746
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAELAVTFFNMGYAQSVAQSMEQNRVDVLVLTQGQYMGILQDKARNHPALEFSLRKILA CCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCEEHHHHHHCCCCCHHHHHHHHHHH SSTFGQYWQHTFSPNASEPWVGPAAQGANDAIAITRTLNAIGMSGITSYVKTTATGTYII HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEE IKGYSARRSSALQGTRYLATHPKMIQLGLGMKSLQGIAKGGFILGVVVSSGIELMDFMFN EECCCHHHHHHHCCCHHECCCCCCEEECCCHHHHHHHHCCCCEEEHHHHCCHHHHHHHHC NEKTMYDLVGGIGVEAVKGGLGALVAYSAAAAFSGVTTIAVAPLVVMAVVAVVAGIGLNH CCCHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LDSRFGVKGKVIAGLKMVPEQASQGLYYIDTQSQAWLDDLRSAMEQRKEELSRSIERGMK HHHHCCCCCEEEHHHHHCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EWFCRISCVLHHAPH HHHHHHHHHHHCCCC >Mature Secondary Structure SAELAVTFFNMGYAQSVAQSMEQNRVDVLVLTQGQYMGILQDKARNHPALEFSLRKILA CCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCEEHHHHHHCCCCCHHHHHHHHHHH SSTFGQYWQHTFSPNASEPWVGPAAQGANDAIAITRTLNAIGMSGITSYVKTTATGTYII HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEE IKGYSARRSSALQGTRYLATHPKMIQLGLGMKSLQGIAKGGFILGVVVSSGIELMDFMFN EECCCHHHHHHHCCCHHECCCCCCEEECCCHHHHHHHHCCCCEEEHHHHCCHHHHHHHHC NEKTMYDLVGGIGVEAVKGGLGALVAYSAAAAFSGVTTIAVAPLVVMAVVAVVAGIGLNH CCCHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LDSRFGVKGKVIAGLKMVPEQASQGLYYIDTQSQAWLDDLRSAMEQRKEELSRSIERGMK HHHHCCCCCEEEHHHHHCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EWFCRISCVLHHAPH HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA