Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610070
Identifier: 120610070
GI number: 120610070
Start: 1517247
End: 1517639
Strand: Direct
Name: 120610070
Synonym: Aave_1383
Alternate gene names: NA
Gene position: 1517247-1517639 (Clockwise)
Preceding gene: 120610069
Following gene: 120610071
Centisome position: 28.35
GC content: 76.59
Gene sequence:
>393_bases ATGCCCGCGCCGCCGCCACCCCCTGCGCCGCGGGCCGCGGACGGCCGCGAGCGCGCGGCCCCCGACCCCTACGGCGAAGG CGGAGGGGCCGCTCCGCCGTTCGCCCCCGACCTGCACGACGCGCGCCACCTCTGGCTGAAGGCGGCGCTGCTGCTGGCCT GGGCGGCGGTGTCCTTCGGCGCCTGCTATTTCGTGCGGGACCTGACCTGGCGGGTGGGCGACTGGCCGCTGGGCTACTGG ATCGCCTCGCAGGGCGCGGTGCTGGCCTTCATCGCCATCGTCGTGGCCTATTGCGTGGCGATGGACCGCTTCGAGCGCGC GGATGCCCGCGCGGCGACGGCCATGTCGCCCGAAGACCCGCCCGCAGGCGGCGCGCCGCACTCCCATGGCTGA
Upstream 100 bases:
>100_bases CTGTGGCTGGCGGAGCAGGGCATCTCGTCGATCTCGCTCAACCCCGACAGCGTGATCGCCACCTGGCAGAAACTCGCTGG CTGACGGCCCGCGCCGGACC
Downstream 100 bases:
>100_bases CGGGCGCCCTGGCGGCTCCGGCGCTGCGGGGAGCGGGCGGCTGCACCGCCTGCTCGCCCTCTACACGGTGGGCGTGCTGG CCTTTCTCCTGCTCATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MPAPPPPPAPRAADGRERAAPDPYGEGGGAAPPFAPDLHDARHLWLKAALLLAWAAVSFGACYFVRDLTWRVGDWPLGYW IASQGAVLAFIAIVVAYCVAMDRFERADARAATAMSPEDPPAGGAPHSHG
Sequences:
>Translated_130_residues MPAPPPPPAPRAADGRERAAPDPYGEGGGAAPPFAPDLHDARHLWLKAALLLAWAAVSFGACYFVRDLTWRVGDWPLGYW IASQGAVLAFIAIVVAYCVAMDRFERADARAATAMSPEDPPAGGAPHSHG >Mature_129_residues PAPPPPPAPRAADGRERAAPDPYGEGGGAAPPFAPDLHDARHLWLKAALLLAWAAVSFGACYFVRDLTWRVGDWPLGYWI ASQGAVLAFIAIVVAYCVAMDRFERADARAATAMSPEDPPAGGAPHSHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13700; Mature: 13568
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPPPPPAPRAADGRERAAPDPYGEGGGAAPPFAPDLHDARHLWLKAALLLAWAAVSFG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ACYFVRDLTWRVGDWPLGYWIASQGAVLAFIAIVVAYCVAMDRFERADARAATAMSPEDP HHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PAGGAPHSHG CCCCCCCCCC >Mature Secondary Structure PAPPPPPAPRAADGRERAAPDPYGEGGGAAPPFAPDLHDARHLWLKAALLLAWAAVSFG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ACYFVRDLTWRVGDWPLGYWIASQGAVLAFIAIVVAYCVAMDRFERADARAATAMSPEDP HHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PAGGAPHSHG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA