Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ppsA [H]
Identifier: 120610069
GI number: 120610069
Start: 1514840
End: 1517230
Strand: Direct
Name: ppsA [H]
Synonym: Aave_1382
Alternate gene names: 120610069
Gene position: 1514840-1517230 (Clockwise)
Preceding gene: 120610067
Following gene: 120610070
Centisome position: 28.3
GC content: 67.42
Gene sequence:
>2391_bases ATGTCTGCACTGTTCGAACCGACCGCCCTGGTCGTTCCGTTTGAGAACCTGAGAATGACCGACGTCGAGTCGGTGGGTGG CAAGAACGCCTCCCTCGGCGAGATGATCTCCCAGCTGCCCGACGGCGTGCGCGTGCCCACCGGCTTCGCGACCACCGCCC ACGCCTTCCGCCAGTTCCTCGCCCACGACGGCCTGGCGCAGAAGATCAGCGACCGCCTCAAGACCCTCGACACCGAGGAC GTGCGCGCCCTGGCCGCGGCCGGCGCCGAGATCCGCGCCATGGTCGAGGCCCAGCCCTTCCCGGCCGACCTCGAGAAGGC CATCCGCGATGCCTTCGCCACGCTGTGCGGCGGCAATGCCGAGGCCTGCTTCGCCGTGCGTTCCTCCGCCACCGCGGAAG ACCTGCCCGACGCCTCATTCGCCGGCCAGCAGGAAACCTTCCTGAACGTGGTGGGCATCGAGGATGTGCTGCACAAGATG AAGGAGGTGTTCGCCTCCCTCTACAACGACCGCGCCATCAGCTACCGCGTGCACAAGGGCTTCGCGCACGACGTGGTGGC CCTTTCTGCGGGCGTGCAGCGCATGGTGCGCTCCGACAAGGGCGCCGCGGGCGTGATGTTCACGATCGACACCGAATCCG GCTTCGACCAGGTGGTGTTCATCACCTCCAGCTACGGCCTGGGCGAGACGGTGGTGCAGGGCGCCGTGAACCCCGACGAG TTCTACGTGCACAAGCCCATGCTGGCCGCCGGCAACCGGGCCGTGATCCGCCGCAACCTCGGCAGCAAGCTCATCCAGAT GGTGTTCGCCTCGCCCGAGGAGAAGAAGGCCAGCGGCAAGCTCGTGAAGACCACCGACGTGCCCACCGAGCAGCGCAACC GCTACTCCCTGACGGACGCCGAGGTGGAACAGCTGGCGCGCTACGCCCTGCTCATCGAGAAGCACTACGGCCGCCCGATG GACATCGAGTGGGGCAAGGACGGCACCGACGGCCAGCTCTACATCCTGCAGGCCCGCCCCGAGACGGTGAAGAGCCAGCA GCAGGGCCAGGCCGAGCAGAAGTTCAAGCTCAAGGGCACGGGCACGGTGCTGGCCGAGGGCCGCGCCATCGGCCAGAAGA TCGGCACGGGCCCGGTCCGCCTCGTGAGCGACATCGCCGAGATGGACAAGGTGCAGCCCGGCGACGTGCTGGTCACCGAC ATGACCGACCCCAACTGGGAGCCCGTGATGAAGCGCGCCAGCGCCATTGTCACCAACCGCGGCGGCCGCACCTGCCACGC GGCCATCATCGCGCGCGAACTCGGCATTCCGGCCGTGGTCGGCTGCGGCGACGCCACCAGCCTGCTCAAGGACGGCACGC TGGTGACGGTGAGCTGCGCCGAGGGCGATACCGGCCGCATCTACGACGGCCTGCTGGAAACCGAGGTGACCGAGGTGCAG CGCGGCGAGATGCCCAAGATCTCCACCAAGATCATGATGAACGTGGGCAATCCCCAGCTGGCCTTCGACTTCTGCCAGTT GCCCAACGAGGGCGTGGGCCTGGCGCGGCTGGAGTTCATCATCAACAACAACATCGGCGTGCACCCCAAGGCCATCCTGG ACTACCCCGCCGTCGATGCCGACCTGAAGAAGGCCGTGGAATCGGTGGCGCGCGGCCATGCCAGCCCCCGTGCCTTCTAC GTGGACAAGGTGGCCGAGGGCGTGGCGACCATCGCCGCGGCCTTCTGGCCCAAGCCCGTCATCGTGCGCCTGTCGGACTT CAAGTCCAATGAATACCGCAAGCTCATCGGCGGCAGCCGCTACGAGCCCGAGGAAGAGAACCCGATGCTGGGCTTCCGCG GCGCGGCGCGCTACATCAGCCAGGACTTCGGCGAGGCCTTCGCGATGGAATGCGAAGCCCTGAAGCGCGTGCGCAACGAC ATGGGCCTGACCAACGTGCAGGTGATGGTGCCCTTCGTGCGCACGCTGGGCCAGGCCGACCGCGTGACGAAGCTGCTGGC CGAGCACGGCCTCAAGCGCGGCGAGAACGAACTCAAGCTCATCATGATGTGCGAGGTGCCGTCGAATGCCGTGCTGGCCG ACGAGTTCCTGCAATTCTTCGACGGTTTCTCGGTGGGCTCCAACGACCTGACCCAGCTCACCCTGGGCCTGGACCGCGAC TCCGGCCTGGAACTGCTGGCCGCCGACTTCGACGAGCGCGACCCGGCCGTGCAGGCGCTGCTCTCGCGCGCCATCGAGGC CTGCAAACGCCAGGGCAAATACGTGGGCATCTGCGGCCAGGGCCCCAGCGACCACCCGGACTTCGCGCTGTGGCTGGCGG AGCAGGGCATCTCGTCGATCTCGCTCAACCCCGACAGCGTGATCGCCACCTGGCAGAAACTCGCTGGCTGA
Upstream 100 bases:
>100_bases CGCCGTGCATGCGTGATGATGGCGCCCCCGCCGGCCCGCCCTCGCGCGCGGGCGGCCCCCTGGGGCGCGCAGACCCGGTT TCAACTTCTGGAGCTTCCCC
Downstream 100 bases:
>100_bases CGGCCCGCGCCGGACCATGCCCGCGCCGCCGCCACCCCCTGCGCCGCGGGCCGCGGACGGCCGCGAGCGCGCGGCCCCCG ACCCCTACGGCGAAGGCGGA
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 796; Mature: 795
Protein sequence:
>796_residues MSALFEPTALVVPFENLRMTDVESVGGKNASLGEMISQLPDGVRVPTGFATTAHAFRQFLAHDGLAQKISDRLKTLDTED VRALAAAGAEIRAMVEAQPFPADLEKAIRDAFATLCGGNAEACFAVRSSATAEDLPDASFAGQQETFLNVVGIEDVLHKM KEVFASLYNDRAISYRVHKGFAHDVVALSAGVQRMVRSDKGAAGVMFTIDTESGFDQVVFITSSYGLGETVVQGAVNPDE FYVHKPMLAAGNRAVIRRNLGSKLIQMVFASPEEKKASGKLVKTTDVPTEQRNRYSLTDAEVEQLARYALLIEKHYGRPM DIEWGKDGTDGQLYILQARPETVKSQQQGQAEQKFKLKGTGTVLAEGRAIGQKIGTGPVRLVSDIAEMDKVQPGDVLVTD MTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATSLLKDGTLVTVSCAEGDTGRIYDGLLETEVTEVQ RGEMPKISTKIMMNVGNPQLAFDFCQLPNEGVGLARLEFIINNNIGVHPKAILDYPAVDADLKKAVESVARGHASPRAFY VDKVAEGVATIAAAFWPKPVIVRLSDFKSNEYRKLIGGSRYEPEEENPMLGFRGAARYISQDFGEAFAMECEALKRVRND MGLTNVQVMVPFVRTLGQADRVTKLLAEHGLKRGENELKLIMMCEVPSNAVLADEFLQFFDGFSVGSNDLTQLTLGLDRD SGLELLAADFDERDPAVQALLSRAIEACKRQGKYVGICGQGPSDHPDFALWLAEQGISSISLNPDSVIATWQKLAG
Sequences:
>Translated_796_residues MSALFEPTALVVPFENLRMTDVESVGGKNASLGEMISQLPDGVRVPTGFATTAHAFRQFLAHDGLAQKISDRLKTLDTED VRALAAAGAEIRAMVEAQPFPADLEKAIRDAFATLCGGNAEACFAVRSSATAEDLPDASFAGQQETFLNVVGIEDVLHKM KEVFASLYNDRAISYRVHKGFAHDVVALSAGVQRMVRSDKGAAGVMFTIDTESGFDQVVFITSSYGLGETVVQGAVNPDE FYVHKPMLAAGNRAVIRRNLGSKLIQMVFASPEEKKASGKLVKTTDVPTEQRNRYSLTDAEVEQLARYALLIEKHYGRPM DIEWGKDGTDGQLYILQARPETVKSQQQGQAEQKFKLKGTGTVLAEGRAIGQKIGTGPVRLVSDIAEMDKVQPGDVLVTD MTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATSLLKDGTLVTVSCAEGDTGRIYDGLLETEVTEVQ RGEMPKISTKIMMNVGNPQLAFDFCQLPNEGVGLARLEFIINNNIGVHPKAILDYPAVDADLKKAVESVARGHASPRAFY VDKVAEGVATIAAAFWPKPVIVRLSDFKSNEYRKLIGGSRYEPEEENPMLGFRGAARYISQDFGEAFAMECEALKRVRND MGLTNVQVMVPFVRTLGQADRVTKLLAEHGLKRGENELKLIMMCEVPSNAVLADEFLQFFDGFSVGSNDLTQLTLGLDRD SGLELLAADFDERDPAVQALLSRAIEACKRQGKYVGICGQGPSDHPDFALWLAEQGISSISLNPDSVIATWQKLAG >Mature_795_residues SALFEPTALVVPFENLRMTDVESVGGKNASLGEMISQLPDGVRVPTGFATTAHAFRQFLAHDGLAQKISDRLKTLDTEDV RALAAAGAEIRAMVEAQPFPADLEKAIRDAFATLCGGNAEACFAVRSSATAEDLPDASFAGQQETFLNVVGIEDVLHKMK EVFASLYNDRAISYRVHKGFAHDVVALSAGVQRMVRSDKGAAGVMFTIDTESGFDQVVFITSSYGLGETVVQGAVNPDEF YVHKPMLAAGNRAVIRRNLGSKLIQMVFASPEEKKASGKLVKTTDVPTEQRNRYSLTDAEVEQLARYALLIEKHYGRPMD IEWGKDGTDGQLYILQARPETVKSQQQGQAEQKFKLKGTGTVLAEGRAIGQKIGTGPVRLVSDIAEMDKVQPGDVLVTDM TDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATSLLKDGTLVTVSCAEGDTGRIYDGLLETEVTEVQR GEMPKISTKIMMNVGNPQLAFDFCQLPNEGVGLARLEFIINNNIGVHPKAILDYPAVDADLKKAVESVARGHASPRAFYV DKVAEGVATIAAAFWPKPVIVRLSDFKSNEYRKLIGGSRYEPEEENPMLGFRGAARYISQDFGEAFAMECEALKRVRNDM GLTNVQVMVPFVRTLGQADRVTKLLAEHGLKRGENELKLIMMCEVPSNAVLADEFLQFFDGFSVGSNDLTQLTLGLDRDS GLELLAADFDERDPAVQALLSRAIEACKRQGKYVGICGQGPSDHPDFALWLAEQGISSISLNPDSVIATWQKLAG
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=789, Percent_Identity=65.3992395437262, Blast_Score=1063, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=453, Percent_Identity=25.3863134657837, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI48994992, Length=400, Percent_Identity=26, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI1788726, Length=193, Percent_Identity=31.0880829015544, Blast_Score=88, Evalue=3e-18, Organism=Escherichia coli, GI1789193, Length=391, Percent_Identity=26.0869565217391, Blast_Score=84, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17564524, Length=321, Percent_Identity=26.4797507788162, Blast_Score=91, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 86358; Mature: 86227
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALFEPTALVVPFENLRMTDVESVGGKNASLGEMISQLPDGVRVPTGFATTAHAFRQFL CCCCCCCCEEEEECCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AHDGLAQKISDRLKTLDTEDVRALAAAGAEIRAMVEAQPFPADLEKAIRDAFATLCGGNA HCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCC EACFAVRSSATAEDLPDASFAGQQETFLNVVGIEDVLHKMKEVFASLYNDRAISYRVHKG CEEEEECCCCCHHCCCCCCCCCCHHHHHEEECHHHHHHHHHHHHHHHHCCCEEEEEECCC FAHDVVALSAGVQRMVRSDKGAAGVMFTIDTESGFDQVVFITSSYGLGETVVQGAVNPDE CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCCCC FYVHKPMLAAGNRAVIRRNLGSKLIQMVFASPEEKKASGKLVKTTDVPTEQRNRYSLTDA EEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCCCCCCHH EVEQLARYALLIEKHYGRPMDIEWGKDGTDGQLYILQARPETVKSQQQGQAEQKFKLKGT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCHHEEEECCC GTVLAEGRAIGQKIGTGPVRLVSDIAEMDKVQPGDVLVTDMTDPNWEPVMKRASAIVTNR CEEEECCHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC GGRTCHAAIIARELGIPAVVGCGDATSLLKDGTLVTVSCAEGDTGRIYDGLLETEVTEVQ CCCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH RGEMPKISTKIMMNVGNPQLAFDFCQLPNEGVGLARLEFIINNNIGVHPKAILDYPAVDA CCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCH DLKKAVESVARGHASPRAFYVDKVAEGVATIAAAFWPKPVIVRLSDFKSNEYRKLIGGSR HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCC YEPEEENPMLGFRGAARYISQDFGEAFAMECEALKRVRNDMGLTNVQVMVPFVRTLGQAD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHH RVTKLLAEHGLKRGENELKLIMMCEVPSNAVLADEFLQFFDGFSVGSNDLTQLTLGLDRD HHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCC SGLELLAADFDERDPAVQALLSRAIEACKRQGKYVGICGQGPSDHPDFALWLAEQGISSI CCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEHHCCCCEE SLNPDSVIATWQKLAG CCCCHHHHHHHHHHCC >Mature Secondary Structure SALFEPTALVVPFENLRMTDVESVGGKNASLGEMISQLPDGVRVPTGFATTAHAFRQFL CCCCCCCEEEEECCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AHDGLAQKISDRLKTLDTEDVRALAAAGAEIRAMVEAQPFPADLEKAIRDAFATLCGGNA HCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCC EACFAVRSSATAEDLPDASFAGQQETFLNVVGIEDVLHKMKEVFASLYNDRAISYRVHKG CEEEEECCCCCHHCCCCCCCCCCHHHHHEEECHHHHHHHHHHHHHHHHCCCEEEEEECCC FAHDVVALSAGVQRMVRSDKGAAGVMFTIDTESGFDQVVFITSSYGLGETVVQGAVNPDE CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCCCC FYVHKPMLAAGNRAVIRRNLGSKLIQMVFASPEEKKASGKLVKTTDVPTEQRNRYSLTDA EEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCCCCCCHH EVEQLARYALLIEKHYGRPMDIEWGKDGTDGQLYILQARPETVKSQQQGQAEQKFKLKGT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCHHEEEECCC GTVLAEGRAIGQKIGTGPVRLVSDIAEMDKVQPGDVLVTDMTDPNWEPVMKRASAIVTNR CEEEECCHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC GGRTCHAAIIARELGIPAVVGCGDATSLLKDGTLVTVSCAEGDTGRIYDGLLETEVTEVQ CCCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH RGEMPKISTKIMMNVGNPQLAFDFCQLPNEGVGLARLEFIINNNIGVHPKAILDYPAVDA CCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCH DLKKAVESVARGHASPRAFYVDKVAEGVATIAAAFWPKPVIVRLSDFKSNEYRKLIGGSR HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCC YEPEEENPMLGFRGAARYISQDFGEAFAMECEALKRVRNDMGLTNVQVMVPFVRTLGQAD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHH RVTKLLAEHGLKRGENELKLIMMCEVPSNAVLADEFLQFFDGFSVGSNDLTQLTLGLDRD HHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCC SGLELLAADFDERDPAVQALLSRAIEACKRQGKYVGICGQGPSDHPDFALWLAEQGISSI CCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEHHCCCCEE SLNPDSVIATWQKLAG CCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]